RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 LTKP29376 864 aa19.04■□□□□ 0.64
SRRM1-223ENST00000600523 KIF1BO60333 1816 aa19.04■□□□□ 0.64
SRRM1-223ENST00000600523 NEURL4Q96JN8 1562 aa19.02■□□□□ 0.63
SRRM1-223ENST00000600523 IQGAP1P46940 1657 aa19.01■□□□□ 0.63
SRRM1-223ENST00000600523 RPGRIP1LQ68CZ1 1315 aa19.01■□□□□ 0.63
SRRM1-223ENST00000600523 ZFYVE9O95405 1425 aa19■□□□□ 0.63
SRRM1-223ENST00000600523 MYO5BQ9ULV0 1848 aa18.99■□□□□ 0.63
SRRM1-223ENST00000600523 PLEKHG1Q9ULL1 1385 aa18.98■□□□□ 0.63
SRRM1-223ENST00000600523 VGFO15240 615 aaPredicted RBP18.98■□□□□ 0.63
SRRM1-223ENST00000600523 ANKRD30BQ9BXX2 1392 aa18.96■□□□□ 0.63
SRRM1-223ENST00000600523 RGL3Q3MIN7 710 aa18.96■□□□□ 0.63
SRRM1-223ENST00000600523 NUTM2DQ5VT03 806 aaPredicted RBP18.96■□□□□ 0.63
SRRM1-223ENST00000600523 PCGF6Q9BYE7 350 aa18.96■□□□□ 0.63
SRRM1-223ENST00000600523 SLC26A8Q96RN1 970 aa18.94■□□□□ 0.62
SRRM1-223ENST00000600523 ZNF335Q9H4Z2 1342 aaPredicted RBP18.94■□□□□ 0.62
SRRM1-223ENST00000600523 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
SRRM1-223ENST00000600523 TBX22Q9Y458 520 aa18.91■□□□□ 0.62
SRRM1-223ENST00000600523 SPATA31E1Q6ZUB1 1445 aa18.91■□□□□ 0.62
SRRM1-223ENST00000600523 NEXMIFQ5QGS0 1516 aa18.9■□□□□ 0.62
SRRM1-223ENST00000600523 CERKQ8TCT0 537 aa18.9■□□□□ 0.62
SRRM1-223ENST00000600523 CPS1P31327 1500 aa18.9■□□□□ 0.62
SRRM1-223ENST00000600523 DIP2AQ14689 1571 aa18.88■□□□□ 0.61
SRRM1-223ENST00000600523 STAC3Q96MF2 364 aa18.87■□□□□ 0.61
SRRM1-223ENST00000600523 KCNA6P17658 529 aa18.86■□□□□ 0.61
SRRM1-223ENST00000600523 LTBP4Q8N2S1 1624 aa18.85■□□□□ 0.61
SRRM1-223ENST00000600523 DHX57Q6P158 1386 aaKnown RBP18.85■□□□□ 0.61
SRRM1-223ENST00000600523 PIK3R4Q99570 1358 aa18.85■□□□□ 0.61
SRRM1-223ENST00000600523 SETBP1Q9Y6X0 1596 aa18.85■□□□□ 0.61
SRRM1-223ENST00000600523 PPLO60437 1756 aa18.83■□□□□ 0.61
SRRM1-223ENST00000600523 IQSEC2Q5JU85 1478 aa18.83■□□□□ 0.6
SRRM1-223ENST00000600523 ADAMTS13Q76LX8 1427 aa18.83■□□□□ 0.6
SRRM1-223ENST00000600523 DCAF11Q8TEB1 546 aa18.81■□□□□ 0.6
SRRM1-223ENST00000600523 PROSER2Q86WR7 435 aaPredicted RBP18.8■□□□□ 0.6
SRRM1-223ENST00000600523 NKTRP30414 1462 aaKnown RBP18.79■□□□□ 0.6
SRRM1-223ENST00000600523 NEUROD1Q13562 356 aa18.79■□□□□ 0.6
SRRM1-223ENST00000600523 KDM2AQ9Y2K7 1162 aa18.79■□□□□ 0.6
SRRM1-223ENST00000600523 MYOM2P54296 1465 aa18.78■□□□□ 0.6
SRRM1-223ENST00000600523 ADGRF5Q8IZF2 1346 aa18.78■□□□□ 0.6
SRRM1-223ENST00000600523 IFT172Q9UG01 1749 aa18.77■□□□□ 0.6
SRRM1-223ENST00000600523 AMOTL2Q9Y2J4 779 aa18.77■□□□□ 0.6
SRRM1-223ENST00000600523 NRXN3Q9Y4C0 1643 aa18.76■□□□□ 0.59
SRRM1-223ENST00000600523 C14orf37Q86TY3 774 aa18.76■□□□□ 0.59
SRRM1-223ENST00000600523 NWD1Q149M9 1564 aa18.76■□□□□ 0.59
SRRM1-223ENST00000600523 PIK3C2GO75747 1445 aa18.75■□□□□ 0.59
SRRM1-223ENST00000600523 ALKQ9UM73 1620 aa18.75■□□□□ 0.59
SRRM1-223ENST00000600523 FBXO41Q8TF61 875 aa18.75■□□□□ 0.59
SRRM1-223ENST00000600523 SIN3AQ96ST3 1273 aa18.75■□□□□ 0.59
SRRM1-223ENST00000600523 LRRC7Q96NW7 1537 aa18.74■□□□□ 0.59
SRRM1-223ENST00000600523 METP08581 1390 aa18.74■□□□□ 0.59
SRRM1-223ENST00000600523 TOM1O60784 492 aa18.74■□□□□ 0.59
SRRM1-223ENST00000600523 CHD2O14647 1828 aaKnown RBP18.74■□□□□ 0.59
SRRM1-223ENST00000600523 TMEM94Q12767 1356 aa18.72■□□□□ 0.59
SRRM1-223ENST00000600523 UBAP1LF5GYI3 381 aa18.72■□□□□ 0.59
SRRM1-223ENST00000600523 C14orf93Q9H972 538 aaKnown RBP18.72■□□□□ 0.59
SRRM1-223ENST00000600523 STRCP1A6NGW2 1772 aa18.72■□□□□ 0.59
SRRM1-223ENST00000600523 NRXN1Q9ULB1 1477 aa18.71■□□□□ 0.59
SRRM1-223ENST00000600523 TONSLQ96HA7 1378 aa18.71■□□□□ 0.59
SRRM1-223ENST00000600523 CLSPNQ9HAW4 1339 aa18.71■□□□□ 0.59
SRRM1-223ENST00000600523 LAMC1P11047 1609 aa18.71■□□□□ 0.58
SRRM1-223ENST00000600523 NCOA3Q9Y6Q9 1424 aa18.7■□□□□ 0.58
SRRM1-223ENST00000600523 MSH6P52701 1360 aa18.69■□□□□ 0.58
SRRM1-223ENST00000600523 CCER1Q8TC90 406 aaPredicted RBP18.69■□□□□ 0.58
SRRM1-223ENST00000600523 L3MBTL2Q969R5 705 aa18.69■□□□□ 0.58
SRRM1-223ENST00000600523 PTPRUQ92729 1446 aa18.68■□□□□ 0.58
SRRM1-223ENST00000600523 CFAP70Q5T0N1 1121 aa18.68■□□□□ 0.58
SRRM1-223ENST00000600523 STK26Q9P289 416 aa18.67■□□□□ 0.58
SRRM1-223ENST00000600523 TMEM132EQ6IEE7 984 aa18.66■□□□□ 0.58
SRRM1-223ENST00000600523 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
SRRM1-223ENST00000600523 XRN1Q8IZH2 1706 aaKnown RBP18.66■□□□□ 0.58
SRRM1-223ENST00000600523 ATF3P18847 181 aa18.65■□□□□ 0.58
SRRM1-223ENST00000600523 RBM33Q96EV2 1170 aaKnown RBP18.65■□□□□ 0.58
SRRM1-223ENST00000600523 C19orf44Q9H6X5 657 aa18.65■□□□□ 0.58
SRRM1-223ENST00000600523 SETD1AO15047 1707 aaKnown RBP18.65■□□□□ 0.58
SRRM1-223ENST00000600523 LRPPRCP42704 1394 aaKnown RBP18.65■□□□□ 0.58
SRRM1-223ENST00000600523 PTCH1Q13635 1447 aa18.65■□□□□ 0.58
SRRM1-223ENST00000600523 CADPS2Q86UW7 1296 aa18.63■□□□□ 0.57
SRRM1-223ENST00000600523 ABCC11Q96J66 1382 aa18.63■□□□□ 0.57
SRRM1-223ENST00000600523 YTHDC2Q9H6S0 1430 aaKnown RBP18.63■□□□□ 0.57
SRRM1-223ENST00000600523 PIP4K2BP78356 416 aa18.62■□□□□ 0.57
SRRM1-223ENST00000600523 PRAG1Q86YV5 1406 aa18.62■□□□□ 0.57
SRRM1-223ENST00000600523 ILDR1Q86SU0 546 aaPredicted RBP18.61■□□□□ 0.57
SRRM1-223ENST00000600523 TECPR2O15040 1411 aa18.6■□□□□ 0.57
SRRM1-223ENST00000600523 SIRT1Q96EB6 747 aa18.6■□□□□ 0.57
SRRM1-223ENST00000600523 ROBO2Q9HCK4 1378 aa18.59■□□□□ 0.57
SRRM1-223ENST00000600523 POGKQ9P215 609 aa18.59■□□□□ 0.57
SRRM1-223ENST00000600523 TIMELESSQ9UNS1 1208 aa18.59■□□□□ 0.57
SRRM1-223ENST00000600523 XIRP1Q702N8 1843 aaKnown RBP18.58■□□□□ 0.56
SRRM1-223ENST00000600523 DCCP43146 1447 aa18.57■□□□□ 0.56
SRRM1-223ENST00000600523 FAM135BQ49AJ0 1406 aa18.57■□□□□ 0.56
SRRM1-223ENST00000600523 ADGRL3Q9HAR2 1447 aa18.57■□□□□ 0.56
SRRM1-223ENST00000600523 ASXL1Q8IXJ9 1541 aa18.57■□□□□ 0.56
SRRM1-223ENST00000600523 KIAA1210Q9ULL0 1709 aa18.57■□□□□ 0.56
SRRM1-223ENST00000600523 TRAK1Q9UPV9 953 aa18.56■□□□□ 0.56
SRRM1-223ENST00000600523 KNDC1Q76NI1 1749 aa18.56■□□□□ 0.56
SRRM1-223ENST00000600523 SLAIN2Q9P270 581 aa18.55■□□□□ 0.56
SRRM1-223ENST00000600523 WAPLQ7Z5K2 1190 aa18.54■□□□□ 0.56
SRRM1-223ENST00000600523 PRAM1Q96QH2 718 aa18.54■□□□□ 0.56
SRRM1-223ENST00000600523 ADGRB1O14514 1584 aa18.54■□□□□ 0.56
SRRM1-223ENST00000600523 DLC1Q96QB1 1528 aa18.54■□□□□ 0.56
SRRM1-223ENST00000600523 ROCK2O75116 1388 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms