RNA–Protein interactions for RNA: ENST00000598441.5

SNRNP70-206, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP70, Length 1,574 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-206ENST00000598441 CCDC144AA2RUR9 1427 aa34.27■■■■□ 3.08
SNRNP70-206ENST00000598441 KIF1BO60333 1816 aa34.27■■■■□ 3.08
SNRNP70-206ENST00000598441 RIMS2Q9UQ26 1411 aa34.26■■■■□ 3.07
SNRNP70-206ENST00000598441 IQGAP1P46940 1657 aa34.25■■■■□ 3.07
SNRNP70-206ENST00000598441 BCANQ96GW7 911 aa34.24■■■■□ 3.07
SNRNP70-206ENST00000598441 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.23■■■■□ 3.07
SNRNP70-206ENST00000598441 NUTM2DQ5VT03 806 aaPredicted RBP34.21■■■■□ 3.07
SNRNP70-206ENST00000598441 ZFYVE9O95405 1425 aa34.21■■■■□ 3.07
SNRNP70-206ENST00000598441 SENP3Q9H4L4 574 aaPredicted RBP34.18■■■■□ 3.06
SNRNP70-206ENST00000598441 ZNF335Q9H4Z2 1342 aaPredicted RBP34.15■■■■□ 3.06
SNRNP70-206ENST00000598441 PLEKHG1Q9ULL1 1385 aa34.11■■■■□ 3.05
SNRNP70-206ENST00000598441 ANKRD30BQ9BXX2 1392 aa34.1■■■■□ 3.05
SNRNP70-206ENST00000598441 RGL3Q3MIN7 710 aa34.1■■■■□ 3.05
SNRNP70-206ENST00000598441 SLC26A8Q96RN1 970 aa34.1■■■■□ 3.05
SNRNP70-206ENST00000598441 RPGRIP1LQ68CZ1 1315 aa34.06■■■■□ 3.04
SNRNP70-206ENST00000598441 NEXMIFQ5QGS0 1516 aa34.05■■■■□ 3.04
SNRNP70-206ENST00000598441 CERKQ8TCT0 537 aa34.03■■■■□ 3.04
SNRNP70-206ENST00000598441 LTBP4Q8N2S1 1624 aa34.03■■■■□ 3.04
SNRNP70-206ENST00000598441 VGFO15240 615 aaPredicted RBP34.02■■■■□ 3.04
SNRNP70-206ENST00000598441 SPATA31E1Q6ZUB1 1445 aa34.01■■■■□ 3.04
SNRNP70-206ENST00000598441 PPLO60437 1756 aa33.95■■■■□ 3.03
SNRNP70-206ENST00000598441 TBX22Q9Y458 520 aa33.95■■■■□ 3.03
SNRNP70-206ENST00000598441 CPS1P31327 1500 aa33.94■■■■□ 3.02
SNRNP70-206ENST00000598441 ADAMTS13Q76LX8 1427 aa33.92■■■■□ 3.02
SNRNP70-206ENST00000598441 DHX57Q6P158 1386 aaKnown RBP33.91■■■■□ 3.02
SNRNP70-206ENST00000598441 DIP2AQ14689 1571 aa33.91■■■■□ 3.02
SNRNP70-206ENST00000598441 KCNA6P17658 529 aa33.89■■■■□ 3.02
SNRNP70-206ENST00000598441 SETBP1Q9Y6X0 1596 aa33.89■■■■□ 3.02
SNRNP70-206ENST00000598441 STRCP1A6NGW2 1772 aa33.88■■■■□ 3.01
SNRNP70-206ENST00000598441 NRXN3Q9Y4C0 1643 aa33.86■■■■□ 3.01
SNRNP70-206ENST00000598441 IFT172Q9UG01 1749 aa33.85■■■■□ 3.01
SNRNP70-206ENST00000598441 ADGRF5Q8IZF2 1346 aa33.85■■■■□ 3.01
SNRNP70-206ENST00000598441 PIK3R4Q99570 1358 aa33.82■■■■□ 3
SNRNP70-206ENST00000598441 CCER1Q8TC90 406 aaPredicted RBP33.81■■■■□ 3
SNRNP70-206ENST00000598441 IQSEC2Q5JU85 1478 aa33.81■■■■□ 3
SNRNP70-206ENST00000598441 CHD2O14647 1828 aaKnown RBP33.8■■■■□ 3
SNRNP70-206ENST00000598441 DCAF11Q8TEB1 546 aa33.8■■■■□ 3
SNRNP70-206ENST00000598441 PROSER2Q86WR7 435 aaPredicted RBP33.79■■■■□ 3
SNRNP70-206ENST00000598441 LRRC7Q96NW7 1537 aa33.79■■■■□ 3
SNRNP70-206ENST00000598441 KDM2AQ9Y2K7 1162 aa33.78■■■■□ 3
SNRNP70-206ENST00000598441 NWD1Q149M9 1564 aa33.77■■■■□ 3
SNRNP70-206ENST00000598441 NEUROD1Q13562 356 aa33.77■■■■□ 3
SNRNP70-206ENST00000598441 ALKQ9UM73 1620 aa33.76■■■□□ 2.99
SNRNP70-206ENST00000598441 SIN3AQ96ST3 1273 aa33.76■■■□□ 2.99
SNRNP70-206ENST00000598441 AMOTL2Q9Y2J4 779 aa33.76■■■□□ 2.99
SNRNP70-206ENST00000598441 METP08581 1390 aa33.76■■■□□ 2.99
SNRNP70-206ENST00000598441 NKTRP30414 1462 aaKnown RBP33.75■■■□□ 2.99
SNRNP70-206ENST00000598441 FBXO41Q8TF61 875 aa33.75■■■□□ 2.99
SNRNP70-206ENST00000598441 MYOM2P54296 1465 aa33.74■■■□□ 2.99
SNRNP70-206ENST00000598441 PIK3C2GO75747 1445 aa33.71■■■□□ 2.99
SNRNP70-206ENST00000598441 PTPRUQ92729 1446 aa33.7■■■□□ 2.99
SNRNP70-206ENST00000598441 RBM33Q96EV2 1170 aaKnown RBP33.7■■■□□ 2.99
SNRNP70-206ENST00000598441 STAC3Q96MF2 364 aa33.7■■■□□ 2.99
SNRNP70-206ENST00000598441 TMEM94Q12767 1356 aa33.7■■■□□ 2.98
SNRNP70-206ENST00000598441 UBAP1LF5GYI3 381 aa33.68■■■□□ 2.98
SNRNP70-206ENST00000598441 SETD1AO15047 1707 aaKnown RBP33.67■■■□□ 2.98
SNRNP70-206ENST00000598441 ZEB1P37275 1124 aaPredicted RBP33.67■■■□□ 2.98
SNRNP70-206ENST00000598441 NRXN1Q9ULB1 1477 aa33.66■■■□□ 2.98
SNRNP70-206ENST00000598441 C14orf37Q86TY3 774 aa33.64■■■□□ 2.98
SNRNP70-206ENST00000598441 CFAP70Q5T0N1 1121 aa33.63■■■□□ 2.97
SNRNP70-206ENST00000598441 ILDR1Q86SU0 546 aaPredicted RBP33.63■■■□□ 2.97
SNRNP70-206ENST00000598441 C14orf93Q9H972 538 aaKnown RBP33.63■■■□□ 2.97
SNRNP70-206ENST00000598441 XIRP1Q702N8 1843 aaKnown RBP33.62■■■□□ 2.97
SNRNP70-206ENST00000598441 XRN1Q8IZH2 1706 aaKnown RBP33.62■■■□□ 2.97
SNRNP70-206ENST00000598441 TOM1O60784 492 aa33.62■■■□□ 2.97
SNRNP70-206ENST00000598441 TMEM132EQ6IEE7 984 aa33.6■■■□□ 2.97
SNRNP70-206ENST00000598441 L3MBTL2Q969R5 705 aa33.59■■■□□ 2.97
SNRNP70-206ENST00000598441 LAMC1P11047 1609 aa33.58■■■□□ 2.97
SNRNP70-206ENST00000598441 STK26Q9P289 416 aa33.58■■■□□ 2.97
SNRNP70-206ENST00000598441 MSH6P52701 1360 aa33.56■■■□□ 2.96
SNRNP70-206ENST00000598441 SCAF1Q9H7N4 1312 aaKnown RBP33.56■■■□□ 2.96
SNRNP70-206ENST00000598441 PIP4K2BP78356 416 aa33.53■■■□□ 2.96
SNRNP70-206ENST00000598441 NCOA3Q9Y6Q9 1424 aa33.53■■■□□ 2.96
SNRNP70-206ENST00000598441 ASXL1Q8IXJ9 1541 aa33.51■■■□□ 2.95
SNRNP70-206ENST00000598441 LRPPRCP42704 1394 aaKnown RBP33.51■■■□□ 2.95
SNRNP70-206ENST00000598441 TONSLQ96HA7 1378 aa33.5■■■□□ 2.95
SNRNP70-206ENST00000598441 PTCH1Q13635 1447 aa33.5■■■□□ 2.95
SNRNP70-206ENST00000598441 ROBO2Q9HCK4 1378 aa33.49■■■□□ 2.95
SNRNP70-206ENST00000598441 YTHDC2Q9H6S0 1430 aaKnown RBP33.49■■■□□ 2.95
SNRNP70-206ENST00000598441 C19orf44Q9H6X5 657 aa33.48■■■□□ 2.95
SNRNP70-206ENST00000598441 CLSPNQ9HAW4 1339 aa33.46■■■□□ 2.95
SNRNP70-206ENST00000598441 ABCC11Q96J66 1382 aa33.46■■■□□ 2.95
SNRNP70-206ENST00000598441 PRAG1Q86YV5 1406 aa33.46■■■□□ 2.95
SNRNP70-206ENST00000598441 ATF3P18847 181 aa33.44■■■□□ 2.94
SNRNP70-206ENST00000598441 TECPR2O15040 1411 aa33.42■■■□□ 2.94
SNRNP70-206ENST00000598441 CADPS2Q86UW7 1296 aa33.41■■■□□ 2.94
SNRNP70-206ENST00000598441 KNDC1Q76NI1 1749 aa33.41■■■□□ 2.94
SNRNP70-206ENST00000598441 WAPLQ7Z5K2 1190 aa33.4■■■□□ 2.94
SNRNP70-206ENST00000598441 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.4■■■□□ 2.94
SNRNP70-206ENST00000598441 ADGRB1O14514 1584 aa33.4■■■□□ 2.94
SNRNP70-206ENST00000598441 ADGRL3Q9HAR2 1447 aa33.38■■■□□ 2.93
SNRNP70-206ENST00000598441 TRAK1Q9UPV9 953 aa33.38■■■□□ 2.93
SNRNP70-206ENST00000598441 KIAA1210Q9ULL0 1709 aa33.37■■■□□ 2.93
SNRNP70-206ENST00000598441 SLAIN2Q9P270 581 aa33.36■■■□□ 2.93
SNRNP70-206ENST00000598441 NALCNQ8IZF0 1738 aa33.35■■■□□ 2.93
SNRNP70-206ENST00000598441 SIRT1Q96EB6 747 aa33.34■■■□□ 2.93
SNRNP70-206ENST00000598441 POGKQ9P215 609 aa33.34■■■□□ 2.93
SNRNP70-206ENST00000598441 DCCP43146 1447 aa33.33■■■□□ 2.93
SNRNP70-206ENST00000598441 NBPF1Q3BBV0 1214 aa33.33■■■□□ 2.93
SNRNP70-206ENST00000598441 FAM135BQ49AJ0 1406 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms