RNA–Protein interactions for RNA: ENST00000596962.5

PGPEP1-205, Transcript of pyroglutamyl-peptidase I, humanhuman

TSL 1 (best)

Gene PGPEP1, Length 1,237 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGPEP1-205ENST00000596962 CPS1P31327 1500 aa20.85■□□□□ 0.93
PGPEP1-205ENST00000596962 SCAF11Q99590 1463 aaKnown RBP20.85■□□□□ 0.93
PGPEP1-205ENST00000596962 TMEM131LA2VDJ0 1609 aa20.85■□□□□ 0.93
PGPEP1-205ENST00000596962 STRCP1A6NGW2 1772 aa20.84■□□□□ 0.93
PGPEP1-205ENST00000596962 STAG3Q9UJ98 1225 aa20.83■□□□□ 0.93
PGPEP1-205ENST00000596962 SIN3AQ96ST3 1273 aa20.81■□□□□ 0.92
PGPEP1-205ENST00000596962 NEUROD1Q13562 356 aa20.8■□□□□ 0.92
PGPEP1-205ENST00000596962 TMEM2Q9UHN6 1383 aa20.8■□□□□ 0.92
PGPEP1-205ENST00000596962 CHGAP10645 457 aaKnown RBP20.79■□□□□ 0.92
PGPEP1-205ENST00000596962 LTKP29376 864 aa20.79■□□□□ 0.92
PGPEP1-205ENST00000596962 TIMELESSQ9UNS1 1208 aa20.79■□□□□ 0.92
PGPEP1-205ENST00000596962 CLTCL1P53675 1640 aa20.77■□□□□ 0.92
PGPEP1-205ENST00000596962 RPGRIP1LQ68CZ1 1315 aa20.77■□□□□ 0.91
PGPEP1-205ENST00000596962 HDGFP51858 240 aaKnown RBP20.76■□□□□ 0.91
PGPEP1-205ENST00000596962 STAC3Q96MF2 364 aa20.75■□□□□ 0.91
PGPEP1-205ENST00000596962 ZFYVE9O95405 1425 aa20.75■□□□□ 0.91
PGPEP1-205ENST00000596962 SPATA31E1Q6ZUB1 1445 aa20.75■□□□□ 0.91
PGPEP1-205ENST00000596962 ZNF326Q5BKZ1 582 aaKnown RBP20.74■□□□□ 0.91
PGPEP1-205ENST00000596962 RGL3Q3MIN7 710 aa20.73■□□□□ 0.91
PGPEP1-205ENST00000596962 TXNDC2Q86VQ3 553 aa20.73■□□□□ 0.91
PGPEP1-205ENST00000596962 TONSLQ96HA7 1378 aa20.72■□□□□ 0.91
PGPEP1-205ENST00000596962 EID1Q9Y6B2 187 aa20.72■□□□□ 0.91
PGPEP1-205ENST00000596962 UBAP1LF5GYI3 381 aa20.71■□□□□ 0.91
PGPEP1-205ENST00000596962 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.71■□□□□ 0.91
PGPEP1-205ENST00000596962 RIMS2Q9UQ26 1411 aa20.7■□□□□ 0.9
PGPEP1-205ENST00000596962 KIF1BO60333 1816 aa20.69■□□□□ 0.9
PGPEP1-205ENST00000596962 XIRP1Q702N8 1843 aaKnown RBP20.69■□□□□ 0.9
PGPEP1-205ENST00000596962 VGFO15240 615 aaPredicted RBP20.67■□□□□ 0.9
PGPEP1-205ENST00000596962 L3MBTL2Q969R5 705 aa20.67■□□□□ 0.9
PGPEP1-205ENST00000596962 DCAF11Q8TEB1 546 aa20.65■□□□□ 0.9
PGPEP1-205ENST00000596962 NWD1Q149M9 1564 aa20.64■□□□□ 0.9
PGPEP1-205ENST00000596962 TOM1O60784 492 aa20.64■□□□□ 0.89
PGPEP1-205ENST00000596962 ZEB1P37275 1124 aaPredicted RBP20.64■□□□□ 0.89
PGPEP1-205ENST00000596962 LRRC7Q96NW7 1537 aa20.63■□□□□ 0.89
PGPEP1-205ENST00000596962 PPP1R15AO75807 674 aaPredicted RBP20.63■□□□□ 0.89
PGPEP1-205ENST00000596962 ALKQ9UM73 1620 aa20.63■□□□□ 0.89
PGPEP1-205ENST00000596962 PLEKHG1Q9ULL1 1385 aa20.62■□□□□ 0.89
PGPEP1-205ENST00000596962 NRXN3Q9Y4C0 1643 aa20.62■□□□□ 0.89
PGPEP1-205ENST00000596962 CHD2O14647 1828 aaKnown RBP20.61■□□□□ 0.89
PGPEP1-205ENST00000596962 NEXMIFQ5QGS0 1516 aa20.61■□□□□ 0.89
PGPEP1-205ENST00000596962 SENP3Q9H4L4 574 aaPredicted RBP20.6■□□□□ 0.89
PGPEP1-205ENST00000596962 KDM2AQ9Y2K7 1162 aa20.6■□□□□ 0.89
PGPEP1-205ENST00000596962 NUTM2DQ5VT03 806 aaPredicted RBP20.59■□□□□ 0.89
PGPEP1-205ENST00000596962 SLC26A8Q96RN1 970 aa20.59■□□□□ 0.89
PGPEP1-205ENST00000596962 MYOM2P54296 1465 aa20.58■□□□□ 0.89
PGPEP1-205ENST00000596962 ADAMTS13Q76LX8 1427 aa20.58■□□□□ 0.88
PGPEP1-205ENST00000596962 DIP2AQ14689 1571 aa20.58■□□□□ 0.88
PGPEP1-205ENST00000596962 PPLO60437 1756 aa20.57■□□□□ 0.88
PGPEP1-205ENST00000596962 SCAF1Q9H7N4 1312 aaKnown RBP20.56■□□□□ 0.88
PGPEP1-205ENST00000596962 SETBP1Q9Y6X0 1596 aa20.55■□□□□ 0.88
PGPEP1-205ENST00000596962 ADGRF5Q8IZF2 1346 aa20.54■□□□□ 0.88
PGPEP1-205ENST00000596962 PIP4K2BP78356 416 aa20.54■□□□□ 0.88
PGPEP1-205ENST00000596962 DISP3Q9P2K9 1392 aa20.54■□□□□ 0.88
PGPEP1-205ENST00000596962 NKTRP30414 1462 aaKnown RBP20.54■□□□□ 0.88
PGPEP1-205ENST00000596962 IFT172Q9UG01 1749 aa20.53■□□□□ 0.88
PGPEP1-205ENST00000596962 SETD1AO15047 1707 aaKnown RBP20.53■□□□□ 0.88
PGPEP1-205ENST00000596962 NRXN1Q9ULB1 1477 aa20.52■□□□□ 0.88
PGPEP1-205ENST00000596962 BCANQ96GW7 911 aa20.52■□□□□ 0.88
PGPEP1-205ENST00000596962 PRAG1Q86YV5 1406 aa20.51■□□□□ 0.87
PGPEP1-205ENST00000596962 KCNA6P17658 529 aa20.5■□□□□ 0.87
PGPEP1-205ENST00000596962 XRN1Q8IZH2 1706 aaKnown RBP20.5■□□□□ 0.87
PGPEP1-205ENST00000596962 C14orf93Q9H972 538 aaKnown RBP20.49■□□□□ 0.87
PGPEP1-205ENST00000596962 PIK3C2GO75747 1445 aa20.49■□□□□ 0.87
PGPEP1-205ENST00000596962 TBX22Q9Y458 520 aa20.47■□□□□ 0.87
PGPEP1-205ENST00000596962 TMEM94Q12767 1356 aa20.46■□□□□ 0.87
PGPEP1-205ENST00000596962 PTPRUQ92729 1446 aa20.46■□□□□ 0.87
PGPEP1-205ENST00000596962 HSPA1LP34931 641 aa20.46■□□□□ 0.87
PGPEP1-205ENST00000596962 NBPF8Q3BBV2 869 aa20.46■□□□□ 0.87
PGPEP1-205ENST00000596962 CFAP70Q5T0N1 1121 aa20.44■□□□□ 0.86
PGPEP1-205ENST00000596962 RBM33Q96EV2 1170 aaKnown RBP20.44■□□□□ 0.86
PGPEP1-205ENST00000596962 PIK3R4Q99570 1358 aa20.43■□□□□ 0.86
PGPEP1-205ENST00000596962 PROSER2Q86WR7 435 aaPredicted RBP20.41■□□□□ 0.86
PGPEP1-205ENST00000596962 METP08581 1390 aa20.4■□□□□ 0.86
PGPEP1-205ENST00000596962 MED1Q15648 1581 aaPredicted RBP20.4■□□□□ 0.86
PGPEP1-205ENST00000596962 ROCK2O75116 1388 aaKnown RBP20.39■□□□□ 0.85
PGPEP1-205ENST00000596962 RALGAPBQ86X10 1494 aa20.38■□□□□ 0.85
PGPEP1-205ENST00000596962 MSH6P52701 1360 aa20.38■□□□□ 0.85
PGPEP1-205ENST00000596962 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.38■□□□□ 0.85
PGPEP1-205ENST00000596962 GPRASP1Q5JY77 1395 aa20.37■□□□□ 0.85
PGPEP1-205ENST00000596962 FAM135BQ49AJ0 1406 aa20.36■□□□□ 0.85
PGPEP1-205ENST00000596962 NCOA3Q9Y6Q9 1424 aa20.36■□□□□ 0.85
PGPEP1-205ENST00000596962 NBPF1Q3BBV0 1214 aa20.36■□□□□ 0.85
PGPEP1-205ENST00000596962 ROBO1Q9Y6N7 1651 aa20.35■□□□□ 0.85
PGPEP1-205ENST00000596962 LAMC1P11047 1609 aa20.35■□□□□ 0.85
PGPEP1-205ENST00000596962 CARD11Q9BXL7 1154 aa20.35■□□□□ 0.85
PGPEP1-205ENST00000596962 NALCNQ8IZF0 1738 aa20.35■□□□□ 0.85
PGPEP1-205ENST00000596962 TMEM132EQ6IEE7 984 aa20.34■□□□□ 0.85
PGPEP1-205ENST00000596962 AMOTL2Q9Y2J4 779 aa20.34■□□□□ 0.85
PGPEP1-205ENST00000596962 ASXL1Q8IXJ9 1541 aa20.33■□□□□ 0.85
PGPEP1-205ENST00000596962 KIAA1210Q9ULL0 1709 aa20.33■□□□□ 0.84
PGPEP1-205ENST00000596962 LRPPRCP42704 1394 aaKnown RBP20.33■□□□□ 0.84
PGPEP1-205ENST00000596962 ABCC11Q96J66 1382 aa20.32■□□□□ 0.84
PGPEP1-205ENST00000596962 SIRT1Q96EB6 747 aa20.31■□□□□ 0.84
PGPEP1-205ENST00000596962 ADGRB1O14514 1584 aa20.3■□□□□ 0.84
PGPEP1-205ENST00000596962 YTHDC2Q9H6S0 1430 aaKnown RBP20.3■□□□□ 0.84
PGPEP1-205ENST00000596962 TRPM1Q7Z4N2 1603 aa20.29■□□□□ 0.84
PGPEP1-205ENST00000596962 ILDR2Q71H61 639 aa20.29■□□□□ 0.84
PGPEP1-205ENST00000596962 KNDC1Q76NI1 1749 aa20.29■□□□□ 0.84
PGPEP1-205ENST00000596962 STK26Q9P289 416 aa20.28■□□□□ 0.84
PGPEP1-205ENST00000596962 EIF3AQ14152 1382 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms