RNA–Protein interactions for RNA: ENST00000596962.5

PGPEP1-205, Transcript of pyroglutamyl-peptidase I, humanhuman

TSL 1 (best)

Gene PGPEP1, Length 1,237 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGPEP1-205ENST00000596962 NISCHQ9Y2I1 1504 aa33.94■■■■□ 3.02
PGPEP1-205ENST00000596962 CCDC180Q9P1Z9 1646 aa30.33■■■□□ 2.45
PGPEP1-205ENST00000596962 ABCC9O60706 1549 aa29.76■■■□□ 2.35
PGPEP1-205ENST00000596962 RB1CC1Q8TDY2 1594 aa28.55■■■□□ 2.16
PGPEP1-205ENST00000596962 NACADO15069 1562 aa28.45■■■□□ 2.15
PGPEP1-205ENST00000596962 ZCCHC6Q5VYS8 1495 aaKnown RBP28.28■■■□□ 2.12
PGPEP1-205ENST00000596962 DCAF8L2P0C7V8 631 aa28.25■■■□□ 2.11
PGPEP1-205ENST00000596962 MYO15BQ96JP2 1530 aa28.22■■■□□ 2.11
PGPEP1-205ENST00000596962 UNC13AQ9UPW8 1703 aa28.09■■■□□ 2.09
PGPEP1-205ENST00000596962 DCAF1Q9Y4B6 1507 aa28.07■■■□□ 2.08
PGPEP1-205ENST00000596962 BICRAQ9NZM4 1560 aa27.77■■■□□ 2.04
PGPEP1-205ENST00000596962 PABPN1Q86U42 306 aaKnown RBP eCLIP27.69■■■□□ 2.02
PGPEP1-205ENST00000596962 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
PGPEP1-205ENST00000596962 DNAJC5BQ9UF47 199 aa27.54■■■□□ 2
PGPEP1-205ENST00000596962 SHROOM4Q9ULL8 1493 aa27.45■■□□□ 1.99
PGPEP1-205ENST00000596962 EIF4G1Q04637 1599 aaKnown RBP27.01■■□□□ 1.91
PGPEP1-205ENST00000596962 CC2D2AQ9P2K1 1620 aa26.95■■□□□ 1.91
PGPEP1-205ENST00000596962 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
PGPEP1-205ENST00000596962 SMARCA4P51532 1647 aa26.43■■□□□ 1.82
PGPEP1-205ENST00000596962 BAZ1AQ9NRL2 1556 aaPredicted RBP26.31■■□□□ 1.8
PGPEP1-205ENST00000596962 ATAD2BQ9ULI0 1458 aa26.26■■□□□ 1.79
PGPEP1-205ENST00000596962 NCAPD3P42695 1498 aa26.23■■□□□ 1.79
PGPEP1-205ENST00000596962 SMARCA2P51531 1590 aa26.2■■□□□ 1.79
PGPEP1-205ENST00000596962 MROH2BQ7Z745 1585 aa26.2■■□□□ 1.78
PGPEP1-205ENST00000596962 HMGXB3Q12766 1538 aa26.15■■□□□ 1.78
PGPEP1-205ENST00000596962 PEG3Q9GZU2 1588 aa26.15■■□□□ 1.78
PGPEP1-205ENST00000596962 BAZ1BQ9UIG0 1483 aaKnown RBP26.02■■□□□ 1.76
PGPEP1-205ENST00000596962 WIZO95785 1651 aa25.96■■□□□ 1.75
PGPEP1-205ENST00000596962 RSF1Q96T23 1441 aaPredicted RBP25.94■■□□□ 1.74
PGPEP1-205ENST00000596962 ERCC6Q03468 1493 aa25.74■■□□□ 1.71
PGPEP1-205ENST00000596962 NESP48681 1621 aa25.74■■□□□ 1.71
PGPEP1-205ENST00000596962 SUPT5HO00267 1087 aaKnown RBP25.68■■□□□ 1.7
PGPEP1-205ENST00000596962 CUX2O14529 1486 aa25.65■■□□□ 1.7
PGPEP1-205ENST00000596962 TOP2AP11388 1531 aaKnown RBP25.62■■□□□ 1.69
PGPEP1-205ENST00000596962 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
PGPEP1-205ENST00000596962 KIF21AQ7Z4S6 1674 aa25.51■■□□□ 1.67
PGPEP1-205ENST00000596962 THOC2Q8NI27 1593 aaKnown RBP25.44■■□□□ 1.66
PGPEP1-205ENST00000596962 CADPSQ9ULU8 1353 aa25.43■■□□□ 1.66
PGPEP1-205ENST00000596962 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
PGPEP1-205ENST00000596962 CFTRP13569 1480 aa25.29■■□□□ 1.64
PGPEP1-205ENST00000596962 CCDC88BA6NC98 1476 aa25.28■■□□□ 1.64
PGPEP1-205ENST00000596962 PRDM2Q13029 1718 aa25.27■■□□□ 1.64
PGPEP1-205ENST00000596962 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
PGPEP1-205ENST00000596962 FANCD2Q9BXW9 1451 aa25.19■■□□□ 1.62
PGPEP1-205ENST00000596962 MRC2Q9UBG0 1479 aa25.18■■□□□ 1.62
PGPEP1-205ENST00000596962 CEP164Q9UPV0 1460 aa25.17■■□□□ 1.62
PGPEP1-205ENST00000596962 WDR62O43379 1518 aa25.15■■□□□ 1.62
PGPEP1-205ENST00000596962 URB2Q14146 1524 aaKnown RBP25.01■■□□□ 1.59
PGPEP1-205ENST00000596962 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
PGPEP1-205ENST00000596962 DNMBPQ6XZF7 1577 aa24.78■■□□□ 1.56
PGPEP1-205ENST00000596962 ABCC8Q09428 1581 aa24.69■■□□□ 1.54
PGPEP1-205ENST00000596962 IFT140Q96RY7 1462 aa24.64■■□□□ 1.53
PGPEP1-205ENST00000596962 ZNF608Q9ULD9 1512 aaPredicted RBP24.61■■□□□ 1.53
PGPEP1-205ENST00000596962 TARBP1Q13395 1621 aaKnown RBP24.6■■□□□ 1.53
PGPEP1-205ENST00000596962 CUX1P39880 1505 aa24.6■■□□□ 1.53
PGPEP1-205ENST00000596962 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.52
PGPEP1-205ENST00000596962 EIF4G3O43432 1585 aaKnown RBP24.55■■□□□ 1.52
PGPEP1-205ENST00000596962 FGD5Q6ZNL6 1462 aa24.5■■□□□ 1.51
PGPEP1-205ENST00000596962 RAD54L2Q9Y4B4 1467 aa24.48■■□□□ 1.51
PGPEP1-205ENST00000596962 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
PGPEP1-205ENST00000596962 WDR97A6NE52 1622 aa24.44■■□□□ 1.5
PGPEP1-205ENST00000596962 OSCARQ8IYS5 282 aa24.41■■□□□ 1.5
PGPEP1-205ENST00000596962 SOGA1O94964 1423 aa24.39■■□□□ 1.5
PGPEP1-205ENST00000596962 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.494e-9■■■■■ 54.5
PGPEP1-205ENST00000596962 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
PGPEP1-205ENST00000596962 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
PGPEP1-205ENST00000596962 TOP2BQ02880 1626 aa24.33■■□□□ 1.49
PGPEP1-205ENST00000596962 CHD1O14646 1710 aa24.31■■□□□ 1.48
PGPEP1-205ENST00000596962 TDRD9Q8NDG6 1382 aaKnown RBP24.29■■□□□ 1.48
PGPEP1-205ENST00000596962 CHIC1Q5VXU3 224 aa24.28■■□□□ 1.48
PGPEP1-205ENST00000596962 TRIM41Q8WV44 630 aa24.28■■□□□ 1.48
PGPEP1-205ENST00000596962 PBRM1Q86U86 1689 aa24.26■■□□□ 1.47
PGPEP1-205ENST00000596962 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
PGPEP1-205ENST00000596962 ABCA10Q8WWZ4 1543 aa24.24■■□□□ 1.47
PGPEP1-205ENST00000596962 SNAPC4Q5SXM2 1469 aa24.2■■□□□ 1.47
PGPEP1-205ENST00000596962 GRIN2BQ13224 1484 aa24.16■■□□□ 1.46
PGPEP1-205ENST00000596962 GAPVD1Q14C86 1478 aa24.14■■□□□ 1.46
PGPEP1-205ENST00000596962 RIMBP3CA6NJZ7 1639 aa24.13■■□□□ 1.45
PGPEP1-205ENST00000596962 RIMBP3BA6NNM3 1639 aa24.13■■□□□ 1.45
PGPEP1-205ENST00000596962 RIMBP3Q9UFD9 1639 aa24.13■■□□□ 1.45
PGPEP1-205ENST00000596962 MAGI1Q96QZ7 1491 aaPredicted RBP24.12■■□□□ 1.45
PGPEP1-205ENST00000596962 ARHGEF11O15085 1522 aa24.08■■□□□ 1.45
PGPEP1-205ENST00000596962 FBLN2P98095 1184 aa24.04■■□□□ 1.44
PGPEP1-205ENST00000596962 SYNJ2O15056 1496 aa24.03■■□□□ 1.44
PGPEP1-205ENST00000596962 ADAMTS12P58397 1594 aa24.02■■□□□ 1.44
PGPEP1-205ENST00000596962 CLASP1Q7Z460 1538 aa23.99■■□□□ 1.43
PGPEP1-205ENST00000596962 KIF27Q86VH2 1401 aa23.94■■□□□ 1.42
PGPEP1-205ENST00000596962 CHMP7Q8WUX9 453 aaPredicted RBP23.94■■□□□ 1.42
PGPEP1-205ENST00000596962 ERICH3Q5RHP9 1530 aa23.94■■□□□ 1.42
PGPEP1-205ENST00000596962 GRIN2AQ12879 1464 aa23.88■■□□□ 1.41
PGPEP1-205ENST00000596962 EEA1Q15075 1411 aa23.86■■□□□ 1.41
PGPEP1-205ENST00000596962 FHAD1B1AJZ9 1412 aa23.84■■□□□ 1.41
PGPEP1-205ENST00000596962 CEP170Q5SW79 1584 aa23.84■■□□□ 1.41
PGPEP1-205ENST00000596962 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
PGPEP1-205ENST00000596962 IGF1RP08069 1367 aa23.78■■□□□ 1.4
PGPEP1-205ENST00000596962 NUP160Q12769 1436 aa23.78■■□□□ 1.4
PGPEP1-205ENST00000596962 CYB5RLQ6IPT4 315 aa23.77■■□□□ 1.4
PGPEP1-205ENST00000596962 RUSC2Q8N2Y8 1516 aa23.74■■□□□ 1.39
PGPEP1-205ENST00000596962 CUL7Q14999 1698 aa23.74■■□□□ 1.39
PGPEP1-205ENST00000596962 CSRNP3Q8WYN3 585 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms