RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 BECN1Q14457 450 aa20.3■□□□□ 0.84
MBD1-222ENST00000590208 TRMT2AQ8IZ69 625 aaKnown RBP20.3■□□□□ 0.84
MBD1-222ENST00000590208 ERCC6L2Q5T890 1561 aa20.29■□□□□ 0.84
MBD1-222ENST00000590208 PRDM15P57071 1507 aaPredicted RBP20.29■□□□□ 0.84
MBD1-222ENST00000590208 AMER1Q5JTC6 1135 aaPredicted RBP20.28■□□□□ 0.84
MBD1-222ENST00000590208 ANTXR1Q9H6X2 564 aa20.28■□□□□ 0.84
MBD1-222ENST00000590208 SHANK2Q9UPX8 1470 aa20.28■□□□□ 0.84
MBD1-222ENST00000590208 PANK1Q8TE04 598 aa20.28■□□□□ 0.84
MBD1-222ENST00000590208 PLA2R1Q13018 1463 aa20.28■□□□□ 0.84
MBD1-222ENST00000590208 PLEKHD1A6NEE1 506 aa20.27■□□□□ 0.84
MBD1-222ENST00000590208 COG6Q9Y2V7 657 aa20.27■□□□□ 0.84
MBD1-222ENST00000590208 SPRYD3Q8NCJ5 442 aa20.27■□□□□ 0.84
MBD1-222ENST00000590208 ADCY10Q96PN6 1610 aa20.27■□□□□ 0.84
MBD1-222ENST00000590208 L1TD1Q5T7N2 865 aaKnown RBP20.26■□□□□ 0.83
MBD1-222ENST00000590208 XRCC6P12956 609 aaKnown RBP eCLIP20.26■□□□□ 0.832e-6■■■■■ 29.9
MBD1-222ENST00000590208 GZF1Q9H116 711 aaPredicted RBP20.26■□□□□ 0.83
MBD1-222ENST00000590208 NKTRP30414 1462 aaKnown RBP20.25■□□□□ 0.83
MBD1-222ENST00000590208 PANK2Q9BZ23 570 aa20.25■□□□□ 0.83
MBD1-222ENST00000590208 WDR7Q9Y4E6 1490 aa20.25■□□□□ 0.83
MBD1-222ENST00000590208 NLRP1Q9C000 1473 aa20.24■□□□□ 0.83
MBD1-222ENST00000590208 CLUAP1Q96AJ1 413 aa20.23■□□□□ 0.83
MBD1-222ENST00000590208 VIRMAQ69YN4 1812 aaKnown RBP20.23■□□□□ 0.83
MBD1-222ENST00000590208 TBC1D2Q9BYX2 928 aa20.23■□□□□ 0.83
MBD1-222ENST00000590208 MAPK8IP3Q9UPT6 1336 aa20.22■□□□□ 0.83
MBD1-222ENST00000590208 CANXP27824 592 aaKnown RBP20.21■□□□□ 0.83
MBD1-222ENST00000590208 NAP1L5Q96NT1 182 aaPredicted RBP20.21■□□□□ 0.83
MBD1-222ENST00000590208 ABCC10Q5T3U5 1492 aa20.21■□□□□ 0.83
MBD1-222ENST00000590208 CGNL1Q0VF96 1302 aa20.2■□□□□ 0.82
MBD1-222ENST00000590208 E9PSI1 815 aa20.19■□□□□ 0.82
MBD1-222ENST00000590208 GOLGA6L3A6NEY3 463 aa20.19■□□□□ 0.82
MBD1-222ENST00000590208 TBC1D32Q96NH3 1257 aa20.17■□□□□ 0.82
MBD1-222ENST00000590208 PDE3AQ14432 1141 aa20.17■□□□□ 0.82
MBD1-222ENST00000590208 LAMC1P11047 1609 aa20.17■□□□□ 0.82
MBD1-222ENST00000590208 CLASP1Q7Z460 1538 aa20.16■□□□□ 0.82
MBD1-222ENST00000590208 PNNQ9H307 717 aaKnown RBP20.16■□□□□ 0.82
MBD1-222ENST00000590208 TNNQ9UQP3 1299 aa20.16■□□□□ 0.82
MBD1-222ENST00000590208 CENPJQ9HC77 1338 aaPredicted RBP20.16■□□□□ 0.82
MBD1-222ENST00000590208 FSD2A1L4K1 749 aa20.16■□□□□ 0.82
MBD1-222ENST00000590208 UPF2Q9HAU5 1272 aaKnown RBP20.15■□□□□ 0.82
MBD1-222ENST00000590208 PCDHB15Q9Y5E8 787 aa20.15■□□□□ 0.82
MBD1-222ENST00000590208 MYO5CQ9NQX4 1742 aa20.14■□□□□ 0.82
MBD1-222ENST00000590208 MCM4P33991 863 aa20.14■□□□□ 0.82
MBD1-222ENST00000590208 PIK3C2GO75747 1445 aa20.13■□□□□ 0.81
MBD1-222ENST00000590208 PKNOX2Q96KN3 472 aa20.13■□□□□ 0.81
MBD1-222ENST00000590208 PDZRN3Q9UPQ7 1066 aa20.13■□□□□ 0.81
MBD1-222ENST00000590208 CCDC141Q6ZP82 1450 aa20.12■□□□□ 0.81
MBD1-222ENST00000590208 ATP10BO94823 1461 aa20.12■□□□□ 0.81
MBD1-222ENST00000590208 RLBP1P12271 317 aa20.12■□□□□ 0.81
MBD1-222ENST00000590208 NEUROD2Q15784 382 aa20.12■□□□□ 0.81
MBD1-222ENST00000590208 CLCN1P35523 988 aa20.11■□□□□ 0.81
MBD1-222ENST00000590208 ASXL1Q8IXJ9 1541 aa20.11■□□□□ 0.81
MBD1-222ENST00000590208 BCL2L13Q9BXK5 485 aa20.11■□□□□ 0.81
MBD1-222ENST00000590208 VSIG10Q8N0Z9 540 aa20.1■□□□□ 0.81
MBD1-222ENST00000590208 EIF2AK4Q9P2K8 1649 aaKnown RBP20.1■□□□□ 0.81
MBD1-222ENST00000590208 CYB5RLQ6IPT4 315 aa20.09■□□□□ 0.81
MBD1-222ENST00000590208 WWC1Q8IX03 1113 aa20.09■□□□□ 0.81
MBD1-222ENST00000590208 TRAK2O60296 914 aa20.09■□□□□ 0.81
MBD1-222ENST00000590208 CARMIL2Q6F5E8 1435 aa20.09■□□□□ 0.81
MBD1-222ENST00000590208 ARHGEF5Q12774 1597 aa20.08■□□□□ 0.81
MBD1-222ENST00000590208 RRP7AQ9Y3A4 280 aaKnown RBP20.08■□□□□ 0.81
MBD1-222ENST00000590208 ABCC2Q92887 1545 aa20.07■□□□□ 0.8
MBD1-222ENST00000590208 HSP90AA2PQ14568 343 aaPredicted RBP20.06■□□□□ 0.8
MBD1-222ENST00000590208 PMFBP1Q8TBY8 1022 aa20.06■□□□□ 0.8
MBD1-222ENST00000590208 GLIPR1L2Q4G1C9 344 aa20.06■□□□□ 0.8
MBD1-222ENST00000590208 HSP90AA1P07900 732 aaKnown RBP20.05■□□□□ 0.8
MBD1-222ENST00000590208 RARSP54136 660 aaKnown RBP20.05■□□□□ 0.8
MBD1-222ENST00000590208 ABCA8O94911 1581 aa20.05■□□□□ 0.8
MBD1-222ENST00000590208 SAMD9LQ8IVG5 1584 aa20.05■□□□□ 0.8
MBD1-222ENST00000590208 CDCA8Q53HL2 280 aa20.05■□□□□ 0.8
MBD1-222ENST00000590208 ZMYND15Q9H091 742 aa20.04■□□□□ 0.8
MBD1-222ENST00000590208 MFAP1P55081 439 aaKnown RBP20.04■□□□□ 0.8
MBD1-222ENST00000590208 RNF17Q9BXT8 1623 aaKnown RBP20.03■□□□□ 0.8
MBD1-222ENST00000590208 SYNMO15061 1565 aa20.03■□□□□ 0.8
MBD1-222ENST00000590208 CHMP5Q9NZZ3 219 aa20.03■□□□□ 0.8
MBD1-222ENST00000590208 ERBB4Q15303 1308 aa20.02■□□□□ 0.8
MBD1-222ENST00000590208 NINLQ9Y2I6 1382 aa20.02■□□□□ 0.8
MBD1-222ENST00000590208 MRE11P49959 708 aa20.01■□□□□ 0.79
MBD1-222ENST00000590208 CARD14Q9BXL6 1004 aa20.01■□□□□ 0.79
MBD1-222ENST00000590208 C22orf23Q9BZE7 217 aa20.01■□□□□ 0.79
MBD1-222ENST00000590208 UNC13BO14795 1591 aa20■□□□□ 0.79
MBD1-222ENST00000590208 GRPEL1Q9HAV7 217 aa20■□□□□ 0.79
MBD1-222ENST00000590208 MYH16Q9H6N6 1097 aa20■□□□□ 0.79
MBD1-222ENST00000590208 SHROOM2Q13796 1616 aa20■□□□□ 0.79
MBD1-222ENST00000590208 NPC1L1Q9UHC9 1359 aa20■□□□□ 0.79
MBD1-222ENST00000590208 RSPH4AQ5TD94 716 aa19.99■□□□□ 0.79
MBD1-222ENST00000590208 TNNT2P45379 298 aaPredicted RBP19.99■□□□□ 0.79
MBD1-222ENST00000590208 RWDD1Q9H446 243 aaPredicted RBP19.99■□□□□ 0.79
MBD1-222ENST00000590208 SYCP2Q9BX26 1530 aa19.99■□□□□ 0.79
MBD1-222ENST00000590208 ESPNB1AK53 854 aa19.98■□□□□ 0.79
MBD1-222ENST00000590208 CDC42BPBQ9Y5S2 1711 aa19.98■□□□□ 0.79
MBD1-222ENST00000590208 MYOM1P52179 1685 aa19.97■□□□□ 0.79
MBD1-222ENST00000590208 RRP9O43818 475 aaKnown RBP19.97■□□□□ 0.79
MBD1-222ENST00000590208 IQGAP1P46940 1657 aa19.97■□□□□ 0.79
MBD1-222ENST00000590208 RTEL1-TNFRSF6BF6WH68 1400 aa19.97■□□□□ 0.79
MBD1-222ENST00000590208 SCAF11Q99590 1463 aaKnown RBP19.97■□□□□ 0.79
MBD1-222ENST00000590208 IQGAP3Q86VI3 1631 aa19.96■□□□□ 0.79
MBD1-222ENST00000590208 TCP11L2Q8N4U5 519 aa19.95■□□□□ 0.78
MBD1-222ENST00000590208 NGEFQ8N5V2 710 aa19.95■□□□□ 0.78
MBD1-222ENST00000590208 PLXNC1O60486 1568 aa19.95■□□□□ 0.78
MBD1-222ENST00000590208 ZNF692Q9BU19 519 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms