RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 NEURL4Q96JN8 1562 aa22.67■■□□□ 1.22
GHDC-209ENST00000588762 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.66■■□□□ 1.22
GHDC-209ENST00000588762 ZFYVE9O95405 1425 aa22.65■■□□□ 1.22
GHDC-209ENST00000588762 PPP1R15AO75807 674 aaPredicted RBP22.65■■□□□ 1.22
GHDC-209ENST00000588762 LTKP29376 864 aa22.65■■□□□ 1.22
GHDC-209ENST00000588762 IQGAP1P46940 1657 aa22.65■■□□□ 1.22
GHDC-209ENST00000588762 MED14O60244 1454 aa22.64■■□□□ 1.21
GHDC-209ENST00000588762 NPHP4O75161 1426 aaPredicted RBP22.64■■□□□ 1.21
GHDC-209ENST00000588762 SPATA31E1Q6ZUB1 1445 aa22.63■■□□□ 1.21
GHDC-209ENST00000588762 RGL3Q3MIN7 710 aa22.62■■□□□ 1.21
GHDC-209ENST00000588762 PPLO60437 1756 aa22.62■■□□□ 1.21
GHDC-209ENST00000588762 RPGRIP1LQ68CZ1 1315 aa22.61■■□□□ 1.21
GHDC-209ENST00000588762 NEXMIFQ5QGS0 1516 aa22.61■■□□□ 1.21
GHDC-209ENST00000588762 NUTM2DQ5VT03 806 aaPredicted RBP22.59■■□□□ 1.21
GHDC-209ENST00000588762 BCANQ96GW7 911 aa22.59■■□□□ 1.21
GHDC-209ENST00000588762 IFT172Q9UG01 1749 aa22.58■■□□□ 1.21
GHDC-209ENST00000588762 PLEKHG1Q9ULL1 1385 aa22.57■■□□□ 1.2
GHDC-209ENST00000588762 VGFO15240 615 aaPredicted RBP22.56■■□□□ 1.2
GHDC-209ENST00000588762 SENP3Q9H4L4 574 aaPredicted RBP22.53■■□□□ 1.2
GHDC-209ENST00000588762 NEUROD1Q13562 356 aa22.51■■□□□ 1.19
GHDC-209ENST00000588762 SIN3AQ96ST3 1273 aa22.51■■□□□ 1.19
GHDC-209ENST00000588762 SLC26A8Q96RN1 970 aa22.49■■□□□ 1.19
GHDC-209ENST00000588762 DIP2AQ14689 1571 aa22.49■■□□□ 1.19
GHDC-209ENST00000588762 SETBP1Q9Y6X0 1596 aa22.49■■□□□ 1.19
GHDC-209ENST00000588762 NRXN3Q9Y4C0 1643 aa22.47■■□□□ 1.19
GHDC-209ENST00000588762 CCER1Q8TC90 406 aaPredicted RBP22.47■■□□□ 1.19
GHDC-209ENST00000588762 DCAF11Q8TEB1 546 aa22.46■■□□□ 1.19
GHDC-209ENST00000588762 STAC3Q96MF2 364 aa22.46■■□□□ 1.19
GHDC-209ENST00000588762 MYOM2P54296 1465 aa22.46■■□□□ 1.19
GHDC-209ENST00000588762 TBX22Q9Y458 520 aa22.45■■□□□ 1.18
GHDC-209ENST00000588762 ADGRF5Q8IZF2 1346 aa22.45■■□□□ 1.18
GHDC-209ENST00000588762 CLSPNQ9HAW4 1339 aa22.45■■□□□ 1.18
GHDC-209ENST00000588762 ADAMTS13Q76LX8 1427 aa22.44■■□□□ 1.18
GHDC-209ENST00000588762 KDM2AQ9Y2K7 1162 aa22.44■■□□□ 1.18
GHDC-209ENST00000588762 ZNF335Q9H4Z2 1342 aaPredicted RBP22.43■■□□□ 1.18
GHDC-209ENST00000588762 CHD2O14647 1828 aaKnown RBP22.42■■□□□ 1.18
GHDC-209ENST00000588762 ALKQ9UM73 1620 aa22.41■■□□□ 1.18
GHDC-209ENST00000588762 NRXN1Q9ULB1 1477 aa22.4■■□□□ 1.18
GHDC-209ENST00000588762 PIK3C2GO75747 1445 aa22.4■■□□□ 1.18
GHDC-209ENST00000588762 LAMC1P11047 1609 aa22.39■■□□□ 1.18
GHDC-209ENST00000588762 STRCP1A6NGW2 1772 aa22.39■■□□□ 1.17
GHDC-209ENST00000588762 SETD1AO15047 1707 aaKnown RBP22.39■■□□□ 1.17
GHDC-209ENST00000588762 TONSLQ96HA7 1378 aa22.38■■□□□ 1.17
GHDC-209ENST00000588762 PIK3R4Q99570 1358 aa22.38■■□□□ 1.17
GHDC-209ENST00000588762 L3MBTL2Q969R5 705 aa22.38■■□□□ 1.17
GHDC-209ENST00000588762 LTBP4Q8N2S1 1624 aa22.38■■□□□ 1.17
GHDC-209ENST00000588762 CPS1P31327 1500 aa22.36■■□□□ 1.17
GHDC-209ENST00000588762 KCNA6P17658 529 aa22.36■■□□□ 1.17
GHDC-209ENST00000588762 NWD1Q149M9 1564 aa22.35■■□□□ 1.17
GHDC-209ENST00000588762 METP08581 1390 aa22.34■■□□□ 1.17
GHDC-209ENST00000588762 C14orf93Q9H972 538 aaKnown RBP22.32■■□□□ 1.16
GHDC-209ENST00000588762 NKTRP30414 1462 aaKnown RBP22.31■■□□□ 1.16
GHDC-209ENST00000588762 CFAP70Q5T0N1 1121 aa22.3■■□□□ 1.16
GHDC-209ENST00000588762 AMOTL2Q9Y2J4 779 aa22.3■■□□□ 1.16
GHDC-209ENST00000588762 XRN1Q8IZH2 1706 aaKnown RBP22.3■■□□□ 1.16
GHDC-209ENST00000588762 KIAA1210Q9ULL0 1709 aa22.3■■□□□ 1.16
GHDC-209ENST00000588762 PRAG1Q86YV5 1406 aa22.29■■□□□ 1.16
GHDC-209ENST00000588762 PTPRUQ92729 1446 aa22.29■■□□□ 1.16
GHDC-209ENST00000588762 CERKQ8TCT0 537 aa22.28■■□□□ 1.16
GHDC-209ENST00000588762 PROSER2Q86WR7 435 aaPredicted RBP22.27■■□□□ 1.16
GHDC-209ENST00000588762 LRRC7Q96NW7 1537 aa22.26■■□□□ 1.15
GHDC-209ENST00000588762 TMEM132EQ6IEE7 984 aa22.26■■□□□ 1.15
GHDC-209ENST00000588762 TIMELESSQ9UNS1 1208 aa22.26■■□□□ 1.15
GHDC-209ENST00000588762 ASXL1Q8IXJ9 1541 aa22.25■■□□□ 1.15
GHDC-209ENST00000588762 XIRP1Q702N8 1843 aaKnown RBP22.24■■□□□ 1.15
GHDC-209ENST00000588762 KNDC1Q76NI1 1749 aa22.23■■□□□ 1.15
GHDC-209ENST00000588762 IQSEC2Q5JU85 1478 aa22.23■■□□□ 1.15
GHDC-209ENST00000588762 STK26Q9P289 416 aa22.23■■□□□ 1.15
GHDC-209ENST00000588762 LRPPRCP42704 1394 aaKnown RBP22.23■■□□□ 1.15
GHDC-209ENST00000588762 YTHDC2Q9H6S0 1430 aaKnown RBP22.23■■□□□ 1.15
GHDC-209ENST00000588762 TRPM1Q7Z4N2 1603 aa22.22■■□□□ 1.15
GHDC-209ENST00000588762 ADGRB1O14514 1584 aa22.21■■□□□ 1.15
GHDC-209ENST00000588762 TMEM94Q12767 1356 aa22.21■■□□□ 1.15
GHDC-209ENST00000588762 ABCC11Q96J66 1382 aa22.2■■□□□ 1.14
GHDC-209ENST00000588762 PTCH1Q13635 1447 aa22.2■■□□□ 1.14
GHDC-209ENST00000588762 RBM33Q96EV2 1170 aaKnown RBP22.18■■□□□ 1.14
GHDC-209ENST00000588762 TECPR2O15040 1411 aa22.17■■□□□ 1.14
GHDC-209ENST00000588762 NCOA3Q9Y6Q9 1424 aa22.17■■□□□ 1.14
GHDC-209ENST00000588762 C14orf37Q86TY3 774 aa22.17■■□□□ 1.14
GHDC-209ENST00000588762 ROBO2Q9HCK4 1378 aa22.16■■□□□ 1.14
GHDC-209ENST00000588762 NBPF8Q3BBV2 869 aa22.16■■□□□ 1.14
GHDC-209ENST00000588762 NBPF1Q3BBV0 1214 aa22.15■■□□□ 1.14
GHDC-209ENST00000588762 ROCK2O75116 1388 aaKnown RBP22.13■■□□□ 1.13
GHDC-209ENST00000588762 MSH6P52701 1360 aa22.13■■□□□ 1.13
GHDC-209ENST00000588762 DLC1Q96QB1 1528 aa22.13■■□□□ 1.13
GHDC-209ENST00000588762 TRAK1Q9UPV9 953 aa22.13■■□□□ 1.13
GHDC-209ENST00000588762 FAM135BQ49AJ0 1406 aa22.13■■□□□ 1.13
GHDC-209ENST00000588762 SIRT1Q96EB6 747 aa22.12■■□□□ 1.13
GHDC-209ENST00000588762 NALCNQ8IZF0 1738 aa22.11■■□□□ 1.13
GHDC-209ENST00000588762 ARHGEF28Q8N1W1 1705 aaKnown RBP22.11■■□□□ 1.13
GHDC-209ENST00000588762 RALGAPBQ86X10 1494 aa22.11■■□□□ 1.13
GHDC-209ENST00000588762 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.11■■□□□ 1.13
GHDC-209ENST00000588762 POGKQ9P215 609 aa22.1■■□□□ 1.13
GHDC-209ENST00000588762 WAPLQ7Z5K2 1190 aa22.09■■□□□ 1.13
GHDC-209ENST00000588762 C19orf44Q9H6X5 657 aa22.09■■□□□ 1.13
GHDC-209ENST00000588762 ADGRL3Q9HAR2 1447 aa22.08■■□□□ 1.13
GHDC-209ENST00000588762 UBAP1LF5GYI3 381 aa22.08■■□□□ 1.13
GHDC-209ENST00000588762 TOM1O60784 492 aa22.08■■□□□ 1.13
GHDC-209ENST00000588762 PRAM1Q96QH2 718 aa22.08■■□□□ 1.13
GHDC-209ENST00000588762 ATF3P18847 181 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms