RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 NISCHQ9Y2I1 1504 aa37.11■■■■□ 3.53
GHDC-209ENST00000588762 CCDC180Q9P1Z9 1646 aa32.94■■■□□ 2.86
GHDC-209ENST00000588762 ABCC9O60706 1549 aa31.9■■■□□ 2.7
GHDC-209ENST00000588762 ZCCHC6Q5VYS8 1495 aaKnown RBP30.96■■■□□ 2.55
GHDC-209ENST00000588762 DCAF8L2P0C7V8 631 aa30.93■■■□□ 2.54
GHDC-209ENST00000588762 NACADO15069 1562 aa30.88■■■□□ 2.53
GHDC-209ENST00000588762 RB1CC1Q8TDY2 1594 aa30.86■■■□□ 2.53
GHDC-209ENST00000588762 MYO15BQ96JP2 1530 aa30.75■■■□□ 2.51
GHDC-209ENST00000588762 DCAF1Q9Y4B6 1507 aa30.73■■■□□ 2.51
GHDC-209ENST00000588762 UNC13AQ9UPW8 1703 aa30.2■■■□□ 2.43
GHDC-209ENST00000588762 SCRIBQ14160 1630 aa30.05■■■□□ 2.4
GHDC-209ENST00000588762 BICRAQ9NZM4 1560 aa29.86■■■□□ 2.37
GHDC-209ENST00000588762 PABPN1Q86U42 306 aaKnown RBP eCLIP29.84■■■□□ 2.37
GHDC-209ENST00000588762 SHROOM4Q9ULL8 1493 aa29.6■■■□□ 2.33
GHDC-209ENST00000588762 EIF4G1Q04637 1599 aaKnown RBP29.06■■■□□ 2.24
GHDC-209ENST00000588762 DNAJC5BQ9UF47 199 aa28.96■■■□□ 2.23
GHDC-209ENST00000588762 CC2D2AQ9P2K1 1620 aa28.89■■■□□ 2.22
GHDC-209ENST00000588762 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
GHDC-209ENST00000588762 BAZ1AQ9NRL2 1556 aaPredicted RBP28.78■■■□□ 2.2
GHDC-209ENST00000588762 SMARCA4P51532 1647 aa28.76■■■□□ 2.2
GHDC-209ENST00000588762 MROH2BQ7Z745 1585 aa28.6■■■□□ 2.17
GHDC-209ENST00000588762 SMARCA2P51531 1590 aa28.53■■■□□ 2.16
GHDC-209ENST00000588762 ATAD2BQ9ULI0 1458 aa28.5■■■□□ 2.15
GHDC-209ENST00000588762 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.15
GHDC-209ENST00000588762 NCAPD3P42695 1498 aa28.44■■■□□ 2.14
GHDC-209ENST00000588762 RSF1Q96T23 1441 aaPredicted RBP28.36■■■□□ 2.13
GHDC-209ENST00000588762 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
GHDC-209ENST00000588762 WIZO95785 1651 aa28.35■■■□□ 2.13
GHDC-209ENST00000588762 BAZ1BQ9UIG0 1483 aaKnown RBP28.32■■■□□ 2.12
GHDC-209ENST00000588762 TOP2AP11388 1531 aaKnown RBP28.05■■■□□ 2.08
GHDC-209ENST00000588762 SUPT5HO00267 1087 aaKnown RBP27.9■■■□□ 2.06
GHDC-209ENST00000588762 LAMC3Q9Y6N6 1575 aa27.7■■■□□ 2.03
GHDC-209ENST00000588762 CCDC88BA6NC98 1476 aa27.7■■■□□ 2.02
GHDC-209ENST00000588762 NESP48681 1621 aa27.67■■■□□ 2.02
GHDC-209ENST00000588762 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
GHDC-209ENST00000588762 CFTRP13569 1480 aa27.52■■■□□ 2
GHDC-209ENST00000588762 ERCC6Q03468 1493 aa27.51■■■□□ 2
GHDC-209ENST00000588762 PDS5BQ9NTI5 1447 aa27.49■■□□□ 1.99
GHDC-209ENST00000588762 PRDM2Q13029 1718 aa27.47■■□□□ 1.99
GHDC-209ENST00000588762 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
GHDC-209ENST00000588762 FANCD2Q9BXW9 1451 aa27.34■■□□□ 1.97
GHDC-209ENST00000588762 CEP164Q9UPV0 1460 aa27.29■■□□□ 1.96
GHDC-209ENST00000588762 THOC2Q8NI27 1593 aaKnown RBP27.22■■□□□ 1.95
GHDC-209ENST00000588762 MRC2Q9UBG0 1479 aa27.18■■□□□ 1.94
GHDC-209ENST00000588762 CUX2O14529 1486 aa27.1■■□□□ 1.93
GHDC-209ENST00000588762 WDR62O43379 1518 aa27.07■■□□□ 1.92
GHDC-209ENST00000588762 URB2Q14146 1524 aaKnown RBP27.03■■□□□ 1.92
GHDC-209ENST00000588762 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
GHDC-209ENST00000588762 DNMBPQ6XZF7 1577 aa26.94■■□□□ 1.9
GHDC-209ENST00000588762 TOPBP1Q92547 1522 aa26.93■■□□□ 1.9
GHDC-209ENST00000588762 CUX1P39880 1505 aa26.82■■□□□ 1.88
GHDC-209ENST00000588762 WRNQ14191 1432 aaPredicted RBP eCLIP26.76■■□□□ 1.87
GHDC-209ENST00000588762 POLA1P09884 1462 aaPredicted RBP26.71■■□□□ 1.87
GHDC-209ENST00000588762 TOP2BQ02880 1626 aa26.7■■□□□ 1.86
GHDC-209ENST00000588762 BIVM-ERCC5R4GMW8 1640 aa26.7■■□□□ 1.86
GHDC-209ENST00000588762 FGD5Q6ZNL6 1462 aa26.69■■□□□ 1.86
GHDC-209ENST00000588762 IFT140Q96RY7 1462 aa26.69■■□□□ 1.86
GHDC-209ENST00000588762 SYNJ1O43426 1573 aa26.68■■□□□ 1.86
GHDC-209ENST00000588762 TARBP1Q13395 1621 aaKnown RBP26.62■■□□□ 1.85
GHDC-209ENST00000588762 SOGA1O94964 1423 aa26.62■■□□□ 1.85
GHDC-209ENST00000588762 RAD54L2Q9Y4B4 1467 aa26.58■■□□□ 1.85
GHDC-209ENST00000588762 ZNF608Q9ULD9 1512 aaPredicted RBP26.52■■□□□ 1.84
GHDC-209ENST00000588762 WDR97A6NE52 1622 aa26.49■■□□□ 1.83
GHDC-209ENST00000588762 EIF4G3O43432 1585 aaKnown RBP26.48■■□□□ 1.83
GHDC-209ENST00000588762 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
GHDC-209ENST00000588762 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
GHDC-209ENST00000588762 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.82
GHDC-209ENST00000588762 TRIM41Q8WV44 630 aa26.35■■□□□ 1.81
GHDC-209ENST00000588762 ABCA5Q8WWZ7 1642 aa26.33■■□□□ 1.81
GHDC-209ENST00000588762 GAPVD1Q14C86 1478 aa26.32■■□□□ 1.8
GHDC-209ENST00000588762 PBRM1Q86U86 1689 aa26.31■■□□□ 1.8
GHDC-209ENST00000588762 GRIN2BQ13224 1484 aa26.28■■□□□ 1.8
GHDC-209ENST00000588762 KIF27Q86VH2 1401 aa26.2■■□□□ 1.78
GHDC-209ENST00000588762 SNAPC4Q5SXM2 1469 aa26.19■■□□□ 1.78
GHDC-209ENST00000588762 MAGI1Q96QZ7 1491 aaPredicted RBP26.18■■□□□ 1.78
GHDC-209ENST00000588762 CHIC1Q5VXU3 224 aa26.17■■□□□ 1.78
GHDC-209ENST00000588762 ERICH3Q5RHP9 1530 aa26.15■■□□□ 1.78
GHDC-209ENST00000588762 CHD1O14646 1710 aa26.14■■□□□ 1.77
GHDC-209ENST00000588762 FBLN2P98095 1184 aa26.09■■□□□ 1.77
GHDC-209ENST00000588762 SYNJ2O15056 1496 aa26.07■■□□□ 1.76
GHDC-209ENST00000588762 CHMP7Q8WUX9 453 aaPredicted RBP26.06■■□□□ 1.76
GHDC-209ENST00000588762 ADAMTS12P58397 1594 aa26.06■■□□□ 1.76
GHDC-209ENST00000588762 OSCARQ8IYS5 282 aa26.03■■□□□ 1.76
GHDC-209ENST00000588762 IGF1RP08069 1367 aa26.02■■□□□ 1.76
GHDC-209ENST00000588762 FHAD1B1AJZ9 1412 aa26.02■■□□□ 1.76
GHDC-209ENST00000588762 CUL7Q14999 1698 aa26.02■■□□□ 1.76
GHDC-209ENST00000588762 RUSC2Q8N2Y8 1516 aa26■■□□□ 1.75
GHDC-209ENST00000588762 GRIN2AQ12879 1464 aa25.93■■□□□ 1.74
GHDC-209ENST00000588762 DNAJC5Q9H3Z4 198 aa25.91■■□□□ 1.74
GHDC-209ENST00000588762 EEA1Q15075 1411 aa25.89■■□□□ 1.74
GHDC-209ENST00000588762 CARMIL1Q5VZK9 1371 aa25.89■■□□□ 1.74
GHDC-209ENST00000588762 CSRNP3Q8WYN3 585 aa25.8■■□□□ 1.72
GHDC-209ENST00000588762 CEP170Q5SW79 1584 aa25.8■■□□□ 1.72
GHDC-209ENST00000588762 FAM9AQ8IZU1 332 aaPredicted RBP25.79■■□□□ 1.72
GHDC-209ENST00000588762 RAPGEF2Q9Y4G8 1499 aa25.79■■□□□ 1.72
GHDC-209ENST00000588762 CLASP1Q7Z460 1538 aa25.78■■□□□ 1.72
GHDC-209ENST00000588762 NUP160Q12769 1436 aa25.78■■□□□ 1.72
GHDC-209ENST00000588762 PRXQ9BXM0 1461 aa25.72■■□□□ 1.71
GHDC-209ENST00000588762 KIAA0586Q9BVV6 1533 aa25.63■■□□□ 1.69
GHDC-209ENST00000588762 KIF21BO75037 1637 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms