RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 A2ML1A8K2U0 1454 aa26.63■■□□□ 1.85
H3F3B-206ENST00000587560 CEP170BQ9Y4F5 1589 aaPredicted RBP26.63■■□□□ 1.85
H3F3B-206ENST00000587560 ZNF335Q9H4Z2 1342 aaPredicted RBP26.62■■□□□ 1.85
H3F3B-206ENST00000587560 IFT172Q9UG01 1749 aa26.58■■□□□ 1.85
H3F3B-206ENST00000587560 NEUROD1Q13562 356 aa26.54■■□□□ 1.84
H3F3B-206ENST00000587560 PPLO60437 1756 aa26.53■■□□□ 1.84
H3F3B-206ENST00000587560 NEXMIFQ5QGS0 1516 aa26.53■■□□□ 1.84
H3F3B-206ENST00000587560 SLIT1O75093 1534 aa26.52■■□□□ 1.84
H3F3B-206ENST00000587560 ARHGAP23Q9P227 1491 aa26.52■■□□□ 1.84
H3F3B-206ENST00000587560 TIMELESSQ9UNS1 1208 aa26.52■■□□□ 1.84
H3F3B-206ENST00000587560 ZFYVE9O95405 1425 aa26.5■■□□□ 1.83
H3F3B-206ENST00000587560 SCAF1Q9H7N4 1312 aaKnown RBP26.49■■□□□ 1.83
H3F3B-206ENST00000587560 RPGRIP1LQ68CZ1 1315 aa26.47■■□□□ 1.83
H3F3B-206ENST00000587560 L3MBTL2Q969R5 705 aa26.47■■□□□ 1.83
H3F3B-206ENST00000587560 TMEM2Q9UHN6 1383 aa26.46■■□□□ 1.83
H3F3B-206ENST00000587560 PIP4K2BP78356 416 aa26.46■■□□□ 1.83
H3F3B-206ENST00000587560 MYOM2P54296 1465 aa26.45■■□□□ 1.82
H3F3B-206ENST00000587560 TONSLQ96HA7 1378 aa26.45■■□□□ 1.82
H3F3B-206ENST00000587560 NRXN1Q9ULB1 1477 aa26.44■■□□□ 1.82
H3F3B-206ENST00000587560 CHGAP10645 457 aaKnown RBP26.44■■□□□ 1.82
H3F3B-206ENST00000587560 RGL3Q3MIN7 710 aa26.44■■□□□ 1.82
H3F3B-206ENST00000587560 THEMISQ8N1K5 641 aaPredicted RBP26.43■■□□□ 1.82
H3F3B-206ENST00000587560 RIMS2Q9UQ26 1411 aa26.42■■□□□ 1.82
H3F3B-206ENST00000587560 STAG3Q9UJ98 1225 aa26.41■■□□□ 1.82
H3F3B-206ENST00000587560 STAC3Q96MF2 364 aa26.4■■□□□ 1.82
H3F3B-206ENST00000587560 NCKAP5LQ9HCH0 1330 aa26.39■■□□□ 1.82
H3F3B-206ENST00000587560 RGS17Q9UGC6 210 aaPredicted RBP26.39■■□□□ 1.82
H3F3B-206ENST00000587560 ZNF326Q5BKZ1 582 aaKnown RBP26.37■■□□□ 1.81
H3F3B-206ENST00000587560 DCAF11Q8TEB1 546 aa26.36■■□□□ 1.81
H3F3B-206ENST00000587560 PPP1R15AO75807 674 aaPredicted RBP26.35■■□□□ 1.81
H3F3B-206ENST00000587560 POLR1AO95602 1720 aaPredicted RBP26.34■■□□□ 1.81
H3F3B-206ENST00000587560 PRAG1Q86YV5 1406 aa26.34■■□□□ 1.81
H3F3B-206ENST00000587560 LTKP29376 864 aa26.34■■□□□ 1.81
H3F3B-206ENST00000587560 PIK3C2GO75747 1445 aa26.33■■□□□ 1.81
H3F3B-206ENST00000587560 NRXN3Q9Y4C0 1643 aa26.33■■□□□ 1.81
H3F3B-206ENST00000587560 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.33■■□□□ 1.81
H3F3B-206ENST00000587560 SCAF11Q99590 1463 aaKnown RBP26.33■■□□□ 1.81
H3F3B-206ENST00000587560 ADGRF5Q8IZF2 1346 aa26.33■■□□□ 1.81
H3F3B-206ENST00000587560 TOM1O60784 492 aa26.32■■□□□ 1.8
H3F3B-206ENST00000587560 VGFO15240 615 aaPredicted RBP26.31■■□□□ 1.8
H3F3B-206ENST00000587560 SETBP1Q9Y6X0 1596 aa26.31■■□□□ 1.8
H3F3B-206ENST00000587560 MED14O60244 1454 aa26.3■■□□□ 1.8
H3F3B-206ENST00000587560 ALKQ9UM73 1620 aa26.3■■□□□ 1.8
H3F3B-206ENST00000587560 KIAA1210Q9ULL0 1709 aa26.3■■□□□ 1.8
H3F3B-206ENST00000587560 SETD1AO15047 1707 aaKnown RBP26.29■■□□□ 1.8
H3F3B-206ENST00000587560 HDGFP51858 240 aaKnown RBP26.29■■□□□ 1.8
H3F3B-206ENST00000587560 NBPF8Q3BBV2 869 aa26.29■■□□□ 1.8
H3F3B-206ENST00000587560 PLEKHG1Q9ULL1 1385 aa26.29■■□□□ 1.8
H3F3B-206ENST00000587560 KDM2AQ9Y2K7 1162 aa26.28■■□□□ 1.8
H3F3B-206ENST00000587560 TRPM1Q7Z4N2 1603 aa26.28■■□□□ 1.8
H3F3B-206ENST00000587560 ZEB1P37275 1124 aaPredicted RBP26.27■■□□□ 1.8
H3F3B-206ENST00000587560 NUTM2DQ5VT03 806 aaPredicted RBP26.27■■□□□ 1.8
H3F3B-206ENST00000587560 TXNDC2Q86VQ3 553 aa26.27■■□□□ 1.8
H3F3B-206ENST00000587560 IQGAP1P46940 1657 aa26.27■■□□□ 1.8
H3F3B-206ENST00000587560 ANKLE2Q86XL3 938 aa26.25■■□□□ 1.79
H3F3B-206ENST00000587560 LAMC1P11047 1609 aa26.25■■□□□ 1.79
H3F3B-206ENST00000587560 EID1Q9Y6B2 187 aa26.24■■□□□ 1.79
H3F3B-206ENST00000587560 ADAMTS13Q76LX8 1427 aa26.23■■□□□ 1.79
H3F3B-206ENST00000587560 C14orf93Q9H972 538 aaKnown RBP26.21■■□□□ 1.79
H3F3B-206ENST00000587560 RALGAPBQ86X10 1494 aa26.21■■□□□ 1.79
H3F3B-206ENST00000587560 DIP2AQ14689 1571 aa26.2■■□□□ 1.78
H3F3B-206ENST00000587560 ASXL1Q8IXJ9 1541 aa26.19■■□□□ 1.78
H3F3B-206ENST00000587560 NPHP4O75161 1426 aaPredicted RBP26.19■■□□□ 1.78
H3F3B-206ENST00000587560 ADGRB1O14514 1584 aa26.19■■□□□ 1.78
H3F3B-206ENST00000587560 CPS1P31327 1500 aa26.19■■□□□ 1.78
H3F3B-206ENST00000587560 GPRASP1Q5JY77 1395 aa26.18■■□□□ 1.78
H3F3B-206ENST00000587560 SRCAPQ6ZRS2 3230 aa26.14■■□□□ 1.78
H3F3B-206ENST00000587560 CFAP70Q5T0N1 1121 aa26.14■■□□□ 1.78
H3F3B-206ENST00000587560 POTEAQ6S8J7 498 aa26.14■■□□□ 1.78
H3F3B-206ENST00000587560 SENP3Q9H4L4 574 aaPredicted RBP26.12■■□□□ 1.77
H3F3B-206ENST00000587560 TBX22Q9Y458 520 aa26.12■■□□□ 1.77
H3F3B-206ENST00000587560 NBPF1Q3BBV0 1214 aa26.11■■□□□ 1.77
H3F3B-206ENST00000587560 METP08581 1390 aa26.08■■□□□ 1.77
H3F3B-206ENST00000587560 CHD2O14647 1828 aaKnown RBP26.07■■□□□ 1.76
H3F3B-206ENST00000587560 PIK3R4Q99570 1358 aa26.07■■□□□ 1.76
H3F3B-206ENST00000587560 SLC26A8Q96RN1 970 aa26.05■■□□□ 1.76
H3F3B-206ENST00000587560 ROCK2O75116 1388 aaKnown RBP26.05■■□□□ 1.76
H3F3B-206ENST00000587560 KNDC1Q76NI1 1749 aa26.05■■□□□ 1.76
H3F3B-206ENST00000587560 XRN1Q8IZH2 1706 aaKnown RBP26.05■■□□□ 1.76
H3F3B-206ENST00000587560 PTPRUQ92729 1446 aa26.05■■□□□ 1.76
H3F3B-206ENST00000587560 NWD1Q149M9 1564 aa26.03■■□□□ 1.76
H3F3B-206ENST00000587560 LRPPRCP42704 1394 aaKnown RBP26.02■■□□□ 1.76
H3F3B-206ENST00000587560 TECPR2O15040 1411 aa26.02■■□□□ 1.76
H3F3B-206ENST00000587560 YTHDC2Q9H6S0 1430 aaKnown RBP26.02■■□□□ 1.76
H3F3B-206ENST00000587560 TMEM132EQ6IEE7 984 aa26.01■■□□□ 1.75
H3F3B-206ENST00000587560 DLC1Q96QB1 1528 aa25.99■■□□□ 1.75
H3F3B-206ENST00000587560 ARHGEF28Q8N1W1 1705 aaKnown RBP25.99■■□□□ 1.75
H3F3B-206ENST00000587560 ABCC11Q96J66 1382 aa25.98■■□□□ 1.75
H3F3B-206ENST00000587560 STRCP1A6NGW2 1772 aa25.98■■□□□ 1.75
H3F3B-206ENST00000587560 BCANQ96GW7 911 aa25.98■■□□□ 1.75
H3F3B-206ENST00000587560 CARD11Q9BXL7 1154 aa25.96■■□□□ 1.75
H3F3B-206ENST00000587560 SIRT1Q96EB6 747 aa25.93■■□□□ 1.74
H3F3B-206ENST00000587560 PTCH1Q13635 1447 aa25.93■■□□□ 1.74
H3F3B-206ENST00000587560 KCNA6P17658 529 aa25.91■■□□□ 1.74
H3F3B-206ENST00000587560 FAM135BQ49AJ0 1406 aa25.9■■□□□ 1.74
H3F3B-206ENST00000587560 AMOTL2Q9Y2J4 779 aa25.9■■□□□ 1.74
H3F3B-206ENST00000587560 USP47Q96K76 1375 aa25.9■■□□□ 1.74
H3F3B-206ENST00000587560 UPF1Q92900 1129 aaKnown RBP eCLIP25.89■■□□□ 1.74
H3F3B-206ENST00000587560 NKTRP30414 1462 aaKnown RBP25.88■■□□□ 1.73
H3F3B-206ENST00000587560 ROBO2Q9HCK4 1378 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms