RNA–Protein interactions for RNA: ENST00000586539.5

ABCA8-208, Transcript of ATP binding cassette subfamily A member 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCA8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-208ENST00000586539 MRE11P49959 708 aa13.74□□□□□ -0.21
ABCA8-208ENST00000586539 ITPRIPQ8IWB1 547 aa13.74□□□□□ -0.21
ABCA8-208ENST00000586539 PLCD3Q8N3E9 789 aa13.74□□□□□ -0.21
ABCA8-208ENST00000586539 HSP90B2PQ58FF3 399 aa13.74□□□□□ -0.21
ABCA8-208ENST00000586539 CGNQ9P2M7 1197 aaKnown RBP13.74□□□□□ -0.21
ABCA8-208ENST00000586539 MYBBP1AQ9BQG0 1328 aaKnown RBP13.74□□□□□ -0.21
ABCA8-208ENST00000586539 NGEFQ8N5V2 710 aa13.74□□□□□ -0.21
ABCA8-208ENST00000586539 RBM28Q9NW13 759 aaKnown RBP13.74□□□□□ -0.21
ABCA8-208ENST00000586539 CGNL1Q0VF96 1302 aa13.74□□□□□ -0.21
ABCA8-208ENST00000586539 TPM4P67936 248 aa13.73□□□□□ -0.21
ABCA8-208ENST00000586539 AK7Q96M32 723 aa13.73□□□□□ -0.21
ABCA8-208ENST00000586539 SMC4Q9NTJ3 1288 aa13.72□□□□□ -0.21
ABCA8-208ENST00000586539 RAD54L2Q9Y4B4 1467 aa13.72□□□□□ -0.21
ABCA8-208ENST00000586539 TRAK1Q9UPV9 953 aa13.72□□□□□ -0.21
ABCA8-208ENST00000586539 CYB5RLQ6IPT4 315 aa13.71□□□□□ -0.21
ABCA8-208ENST00000586539 PES1O00541 588 aaKnown RBP13.71□□□□□ -0.21
ABCA8-208ENST00000586539 COG3Q96JB2 828 aa13.71□□□□□ -0.21
ABCA8-208ENST00000586539 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.21
ABCA8-208ENST00000586539 FYCO1Q9BQS8 1478 aa13.71□□□□□ -0.22
ABCA8-208ENST00000586539 ZHX1Q9UKY1 873 aaPredicted RBP13.71□□□□□ -0.22
ABCA8-208ENST00000586539 CENPJQ9HC77 1338 aaPredicted RBP13.7□□□□□ -0.22
ABCA8-208ENST00000586539 TMCO5BA8MYB1 307 aa13.7□□□□□ -0.22
ABCA8-208ENST00000586539 CDR1P51861 262 aa13.7□□□□□ -0.22
ABCA8-208ENST00000586539 GTF2A1P52655 376 aaPredicted RBP13.7□□□□□ -0.22
ABCA8-208ENST00000586539 ERICH3Q5RHP9 1530 aa13.7□□□□□ -0.22
ABCA8-208ENST00000586539 GNL2Q13823 731 aaKnown RBP13.7□□□□□ -0.22
ABCA8-208ENST00000586539 FGD6Q6ZV73 1430 aa13.7□□□□□ -0.22
ABCA8-208ENST00000586539 CASKIN1Q8WXD9 1431 aa13.7□□□□□ -0.22
ABCA8-208ENST00000586539 TDO2P48775 406 aa13.69□□□□□ -0.22
ABCA8-208ENST00000586539 DCTN1Q14203 1278 aa13.69□□□□□ -0.22
ABCA8-208ENST00000586539 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
ABCA8-208ENST00000586539 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
ABCA8-208ENST00000586539 IFT140Q96RY7 1462 aa13.69□□□□□ -0.22
ABCA8-208ENST00000586539 GORABQ5T7V8 394 aa13.68□□□□□ -0.22
ABCA8-208ENST00000586539 TPM3P06753 285 aa13.68□□□□□ -0.22
ABCA8-208ENST00000586539 CCDC70Q6NSX1 233 aa13.68□□□□□ -0.22
ABCA8-208ENST00000586539 INCENPQ9NQS7 918 aa13.68□□□□□ -0.22
ABCA8-208ENST00000586539 CFTRP13569 1480 aa13.68□□□□□ -0.22
ABCA8-208ENST00000586539 PDCL2Q8N4E4 241 aa13.68□□□□□ -0.22
ABCA8-208ENST00000586539 ST20-MTHFSA0A0A6YYL1 179 aa13.67□□□□□ -0.22
ABCA8-208ENST00000586539 TNNT1P13805 278 aa13.67□□□□□ -0.22
ABCA8-208ENST00000586539 SYNJ2O15056 1496 aa13.67□□□□□ -0.22
ABCA8-208ENST00000586539 HMGXB3Q12766 1538 aa13.67□□□□□ -0.22
ABCA8-208ENST00000586539 BCCIPQ9P287 314 aaKnown RBP eCLIP13.67□□□□□ -0.22
ABCA8-208ENST00000586539 USP47Q96K76 1375 aa13.67□□□□□ -0.22
ABCA8-208ENST00000586539 ZNF330Q9Y3S2 320 aaPredicted RBP13.66□□□□□ -0.22
ABCA8-208ENST00000586539 NUTM2DQ5VT03 806 aaPredicted RBP13.66□□□□□ -0.22
ABCA8-208ENST00000586539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.66□□□□□ -0.22
ABCA8-208ENST00000586539 KIF21BO75037 1637 aa13.66□□□□□ -0.22
ABCA8-208ENST00000586539 EFCAB5A4FU69 1503 aa13.66□□□□□ -0.22
ABCA8-208ENST00000586539 SETSIPP0DME0 302 aa13.65□□□□□ -0.22
ABCA8-208ENST00000586539 PANK3Q9H999 370 aa13.65□□□□□ -0.22
ABCA8-208ENST00000586539 DDX49Q9Y6V7 483 aaKnown RBP13.65□□□□□ -0.22
ABCA8-208ENST00000586539 C1orf141Q5JVX7 400 aa13.65□□□□□ -0.22
ABCA8-208ENST00000586539 IPO4Q8TEX9 1081 aaKnown RBP13.65□□□□□ -0.22
ABCA8-208ENST00000586539 CCDC39Q9UFE4 941 aa13.65□□□□□ -0.22
ABCA8-208ENST00000586539 PLEKHH2Q8IVE3 1493 aa13.65□□□□□ -0.22
ABCA8-208ENST00000586539 CCAR2Q8N163 923 aaKnown RBP13.64□□□□□ -0.23
ABCA8-208ENST00000586539 ZNF592Q92610 1267 aa13.64□□□□□ -0.23
ABCA8-208ENST00000586539 CCDC34Q96HJ3 373 aa13.64□□□□□ -0.23
ABCA8-208ENST00000586539 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
ABCA8-208ENST00000586539 FAM69CQ0P6D2 419 aa13.64□□□□□ -0.23
ABCA8-208ENST00000586539 CTR9Q6PD62 1173 aa13.64□□□□□ -0.23
ABCA8-208ENST00000586539 DHX37Q8IY37 1157 aaKnown RBP13.64□□□□□ -0.23
ABCA8-208ENST00000586539 AQRO60306 1485 aaKnown RBP eCLIP13.64□□□□□ -0.23
ABCA8-208ENST00000586539 MIA2Q96PC5 1412 aa13.64□□□□□ -0.23
ABCA8-208ENST00000586539 CHMP4CQ96CF2 233 aa13.64□□□□□ -0.23
ABCA8-208ENST00000586539 TIGD1Q96MW7 591 aa13.63□□□□□ -0.23
ABCA8-208ENST00000586539 GOLGA6L10A6NI86 522 aa13.63□□□□□ -0.23
ABCA8-208ENST00000586539 LRRC9Q6ZRR7 1453 aa13.63□□□□□ -0.23
ABCA8-208ENST00000586539 PRDM2Q13029 1718 aa13.63□□□□□ -0.23
ABCA8-208ENST00000586539 LETM1O95202 739 aaPredicted RBP13.63□□□□□ -0.23
ABCA8-208ENST00000586539 NFKBIBQ15653 356 aa13.62□□□□□ -0.23
ABCA8-208ENST00000586539 APBB1O00213 710 aa13.62□□□□□ -0.23
ABCA8-208ENST00000586539 CLSTN1O94985 981 aa13.62□□□□□ -0.23
ABCA8-208ENST00000586539 ISY1Q9ULR0 285 aaKnown RBP13.62□□□□□ -0.23
ABCA8-208ENST00000586539 KIAA0754O94854 1291 aa13.62□□□□□ -0.23
ABCA8-208ENST00000586539 PRDM10Q9NQV6 1147 aa13.62□□□□□ -0.23
ABCA8-208ENST00000586539 ANKRD50Q9ULJ7 1429 aa13.61□□□□□ -0.23
ABCA8-208ENST00000586539 UQCRHLA0A096LP55 91 aa13.61□□□□□ -0.23
ABCA8-208ENST00000586539 GOLGA6L19H0YKK7 550 aa13.61□□□□□ -0.23
ABCA8-208ENST00000586539 UQCRHP07919 91 aa13.61□□□□□ -0.23
ABCA8-208ENST00000586539 CHMP3Q9Y3E7 222 aa13.61□□□□□ -0.23
ABCA8-208ENST00000586539 ERCC4Q92889 916 aaPredicted RBP13.61□□□□□ -0.23
ABCA8-208ENST00000586539 MNS1Q8NEH6 495 aa13.61□□□□□ -0.23
ABCA8-208ENST00000586539 TAOK2Q9UL54 1235 aa13.6□□□□□ -0.23
ABCA8-208ENST00000586539 NEXNQ0ZGT2 675 aa13.6□□□□□ -0.23
ABCA8-208ENST00000586539 SARNPP82979 210 aaKnown RBP13.6□□□□□ -0.23
ABCA8-208ENST00000586539 ARHGAP5Q13017 1502 aa13.6□□□□□ -0.23
ABCA8-208ENST00000586539 RRBP1Q9P2E9 1410 aaKnown RBP13.6□□□□□ -0.23
ABCA8-208ENST00000586539 NCOA2Q15596 1464 aa13.59□□□□□ -0.23
ABCA8-208ENST00000586539 CCDC146Q8IYE0 955 aa13.59□□□□□ -0.23
ABCA8-208ENST00000586539 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.23
ABCA8-208ENST00000586539 LTV1Q96GA3 475 aaPredicted RBP13.59□□□□□ -0.23
ABCA8-208ENST00000586539 ESPNB1AK53 854 aa13.59□□□□□ -0.23
ABCA8-208ENST00000586539 TEFQ10587 303 aa13.59□□□□□ -0.23
ABCA8-208ENST00000586539 SLC4A10Q6U841 1118 aa13.59□□□□□ -0.23
ABCA8-208ENST00000586539 ZRSR2Q15696 482 aaKnown RBP13.58□□□□□ -0.24
ABCA8-208ENST00000586539 LRRFIP1Q32MZ4 808 aaKnown RBP13.58□□□□□ -0.24
ABCA8-208ENST00000586539 KIF16BQ96L93 1317 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms