RNA–Protein interactions for RNA: ENST00000586002.3

PCSK4-203, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-203ENST00000586002 MED14O60244 1454 aa25.5■■□□□ 1.67
PCSK4-203ENST00000586002 RGL3Q3MIN7 710 aa25.5■■□□□ 1.67
PCSK4-203ENST00000586002 NPHP4O75161 1426 aaPredicted RBP25.49■■□□□ 1.67
PCSK4-203ENST00000586002 NUTM2DQ5VT03 806 aaPredicted RBP25.49■■□□□ 1.67
PCSK4-203ENST00000586002 ZFYVE9O95405 1425 aa25.48■■□□□ 1.67
PCSK4-203ENST00000586002 DHX57Q6P158 1386 aaKnown RBP25.47■■□□□ 1.67
PCSK4-203ENST00000586002 KIF1BO60333 1816 aa25.47■■□□□ 1.67
PCSK4-203ENST00000586002 BCANQ96GW7 911 aa25.47■■□□□ 1.67
PCSK4-203ENST00000586002 MYO5BQ9ULV0 1848 aa25.47■■□□□ 1.67
PCSK4-203ENST00000586002 VGFO15240 615 aaPredicted RBP25.45■■□□□ 1.66
PCSK4-203ENST00000586002 SPATA31E1Q6ZUB1 1445 aa25.43■■□□□ 1.66
PCSK4-203ENST00000586002 NEURL4Q96JN8 1562 aa25.43■■□□□ 1.66
PCSK4-203ENST00000586002 POLR1AO95602 1720 aaPredicted RBP25.42■■□□□ 1.66
PCSK4-203ENST00000586002 PLEKHG1Q9ULL1 1385 aa25.42■■□□□ 1.66
PCSK4-203ENST00000586002 SLC26A8Q96RN1 970 aa25.39■■□□□ 1.66
PCSK4-203ENST00000586002 SENP3Q9H4L4 574 aaPredicted RBP25.39■■□□□ 1.66
PCSK4-203ENST00000586002 TBX22Q9Y458 520 aa25.38■■□□□ 1.65
PCSK4-203ENST00000586002 SIN3AQ96ST3 1273 aa25.36■■□□□ 1.65
PCSK4-203ENST00000586002 IQGAP1P46940 1657 aa25.35■■□□□ 1.65
PCSK4-203ENST00000586002 NEXMIFQ5QGS0 1516 aa25.34■■□□□ 1.65
PCSK4-203ENST00000586002 STAC3Q96MF2 364 aa25.34■■□□□ 1.65
PCSK4-203ENST00000586002 ZNF335Q9H4Z2 1342 aaPredicted RBP25.34■■□□□ 1.65
PCSK4-203ENST00000586002 NEUROD1Q13562 356 aa25.33■■□□□ 1.65
PCSK4-203ENST00000586002 ADGRF5Q8IZF2 1346 aa25.31■■□□□ 1.64
PCSK4-203ENST00000586002 DCAF11Q8TEB1 546 aa25.3■■□□□ 1.64
PCSK4-203ENST00000586002 KDM2AQ9Y2K7 1162 aa25.29■■□□□ 1.64
PCSK4-203ENST00000586002 KCNA6P17658 529 aa25.28■■□□□ 1.64
PCSK4-203ENST00000586002 ADAMTS13Q76LX8 1427 aa25.28■■□□□ 1.64
PCSK4-203ENST00000586002 PPLO60437 1756 aa25.24■■□□□ 1.63
PCSK4-203ENST00000586002 PIK3R4Q99570 1358 aa25.23■■□□□ 1.63
PCSK4-203ENST00000586002 CERKQ8TCT0 537 aa25.23■■□□□ 1.63
PCSK4-203ENST00000586002 L3MBTL2Q969R5 705 aa25.22■■□□□ 1.63
PCSK4-203ENST00000586002 SETBP1Q9Y6X0 1596 aa25.22■■□□□ 1.63
PCSK4-203ENST00000586002 CLSPNQ9HAW4 1339 aa25.21■■□□□ 1.63
PCSK4-203ENST00000586002 CCER1Q8TC90 406 aaPredicted RBP25.21■■□□□ 1.63
PCSK4-203ENST00000586002 LTBP4Q8N2S1 1624 aa25.2■■□□□ 1.62
PCSK4-203ENST00000586002 C14orf93Q9H972 538 aaKnown RBP25.2■■□□□ 1.62
PCSK4-203ENST00000586002 AMOTL2Q9Y2J4 779 aa25.19■■□□□ 1.62
PCSK4-203ENST00000586002 DIP2AQ14689 1571 aa25.18■■□□□ 1.62
PCSK4-203ENST00000586002 MYOM2P54296 1465 aa25.18■■□□□ 1.62
PCSK4-203ENST00000586002 PROSER2Q86WR7 435 aaPredicted RBP25.17■■□□□ 1.62
PCSK4-203ENST00000586002 IFT172Q9UG01 1749 aa25.17■■□□□ 1.62
PCSK4-203ENST00000586002 METP08581 1390 aa25.17■■□□□ 1.62
PCSK4-203ENST00000586002 CFAP70Q5T0N1 1121 aa25.16■■□□□ 1.62
PCSK4-203ENST00000586002 PIK3C2GO75747 1445 aa25.15■■□□□ 1.62
PCSK4-203ENST00000586002 CPS1P31327 1500 aa25.15■■□□□ 1.62
PCSK4-203ENST00000586002 ALKQ9UM73 1620 aa25.15■■□□□ 1.62
PCSK4-203ENST00000586002 NRXN3Q9Y4C0 1643 aa25.15■■□□□ 1.62
PCSK4-203ENST00000586002 NRXN1Q9ULB1 1477 aa25.15■■□□□ 1.62
PCSK4-203ENST00000586002 TMEM132EQ6IEE7 984 aa25.12■■□□□ 1.61
PCSK4-203ENST00000586002 PTPRUQ92729 1446 aa25.11■■□□□ 1.61
PCSK4-203ENST00000586002 CHD2O14647 1828 aaKnown RBP25.1■■□□□ 1.61
PCSK4-203ENST00000586002 TONSLQ96HA7 1378 aa25.1■■□□□ 1.61
PCSK4-203ENST00000586002 STRCP1A6NGW2 1772 aa25.08■■□□□ 1.61
PCSK4-203ENST00000586002 LRRC7Q96NW7 1537 aa25.07■■□□□ 1.6
PCSK4-203ENST00000586002 STK26Q9P289 416 aa25.06■■□□□ 1.6
PCSK4-203ENST00000586002 TIMELESSQ9UNS1 1208 aa25.06■■□□□ 1.6
PCSK4-203ENST00000586002 NKTRP30414 1462 aaKnown RBP25.05■■□□□ 1.6
PCSK4-203ENST00000586002 NWD1Q149M9 1564 aa25.05■■□□□ 1.6
PCSK4-203ENST00000586002 TMEM94Q12767 1356 aa25.05■■□□□ 1.6
PCSK4-203ENST00000586002 IQSEC2Q5JU85 1478 aa25.04■■□□□ 1.6
PCSK4-203ENST00000586002 RBM33Q96EV2 1170 aaKnown RBP25.04■■□□□ 1.6
PCSK4-203ENST00000586002 LRPPRCP42704 1394 aaKnown RBP25.03■■□□□ 1.6
PCSK4-203ENST00000586002 ABCC11Q96J66 1382 aa25.03■■□□□ 1.6
PCSK4-203ENST00000586002 PRAG1Q86YV5 1406 aa25.03■■□□□ 1.6
PCSK4-203ENST00000586002 SETD1AO15047 1707 aaKnown RBP25.01■■□□□ 1.59
PCSK4-203ENST00000586002 SIRT1Q96EB6 747 aa25.01■■□□□ 1.59
PCSK4-203ENST00000586002 NCOA3Q9Y6Q9 1424 aa25.01■■□□□ 1.59
PCSK4-203ENST00000586002 C14orf37Q86TY3 774 aa24.99■■□□□ 1.59
PCSK4-203ENST00000586002 YTHDC2Q9H6S0 1430 aaKnown RBP24.99■■□□□ 1.59
PCSK4-203ENST00000586002 NBPF1Q3BBV0 1214 aa24.98■■□□□ 1.59
PCSK4-203ENST00000586002 UBAP1LF5GYI3 381 aa24.97■■□□□ 1.59
PCSK4-203ENST00000586002 TOM1O60784 492 aa24.97■■□□□ 1.59
PCSK4-203ENST00000586002 NBPF8Q3BBV2 869 aa24.97■■□□□ 1.59
PCSK4-203ENST00000586002 C19orf44Q9H6X5 657 aa24.97■■□□□ 1.59
PCSK4-203ENST00000586002 LAMC1P11047 1609 aa24.97■■□□□ 1.59
PCSK4-203ENST00000586002 ROBO2Q9HCK4 1378 aa24.96■■□□□ 1.59
PCSK4-203ENST00000586002 FBXO41Q8TF61 875 aa24.96■■□□□ 1.59
PCSK4-203ENST00000586002 XRN1Q8IZH2 1706 aaKnown RBP24.95■■□□□ 1.59
PCSK4-203ENST00000586002 WAPLQ7Z5K2 1190 aa24.94■■□□□ 1.58
PCSK4-203ENST00000586002 TRAK1Q9UPV9 953 aa24.94■■□□□ 1.58
PCSK4-203ENST00000586002 ASXL1Q8IXJ9 1541 aa24.94■■□□□ 1.58
PCSK4-203ENST00000586002 PTCH1Q13635 1447 aa24.94■■□□□ 1.58
PCSK4-203ENST00000586002 MSH6P52701 1360 aa24.93■■□□□ 1.58
PCSK4-203ENST00000586002 TECPR2O15040 1411 aa24.93■■□□□ 1.58
PCSK4-203ENST00000586002 POGKQ9P215 609 aa24.91■■□□□ 1.58
PCSK4-203ENST00000586002 ADGRB1O14514 1584 aa24.91■■□□□ 1.58
PCSK4-203ENST00000586002 ATF3P18847 181 aa24.9■■□□□ 1.58
PCSK4-203ENST00000586002 FAM135BQ49AJ0 1406 aa24.89■■□□□ 1.58
PCSK4-203ENST00000586002 CADPS2Q86UW7 1296 aa24.89■■□□□ 1.58
PCSK4-203ENST00000586002 PRAM1Q96QH2 718 aa24.89■■□□□ 1.58
PCSK4-203ENST00000586002 KIAA1210Q9ULL0 1709 aa24.89■■□□□ 1.57
PCSK4-203ENST00000586002 XIRP1Q702N8 1843 aaKnown RBP24.88■■□□□ 1.57
PCSK4-203ENST00000586002 ROCK2O75116 1388 aaKnown RBP24.86■■□□□ 1.57
PCSK4-203ENST00000586002 PLEKHH1Q9ULM0 1364 aa24.84■■□□□ 1.57
PCSK4-203ENST00000586002 SLAIN2Q9P270 581 aa24.84■■□□□ 1.57
PCSK4-203ENST00000586002 DLC1Q96QB1 1528 aa24.83■■□□□ 1.57
PCSK4-203ENST00000586002 PIP4K2BP78356 416 aa24.83■■□□□ 1.57
PCSK4-203ENST00000586002 SAFB2Q14151 953 aaKnown RBP eCLIP24.83■■□□□ 1.57
PCSK4-203ENST00000586002 ADGRL3Q9HAR2 1447 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms