RNA–Protein interactions for RNA: ENST00000585931.5

LDLRAD4-205, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-205ENST00000585931 IFT172Q9UG01 1749 aa20.92■□□□□ 0.94
LDLRAD4-205ENST00000585931 MYOM2P54296 1465 aa20.92■□□□□ 0.94
LDLRAD4-205ENST00000585931 TESK2Q96S53 571 aa20.92■□□□□ 0.94
LDLRAD4-205ENST00000585931 PIK3C2BO00750 1634 aa20.9■□□□□ 0.94
LDLRAD4-205ENST00000585931 IDI1Q13907 227 aa20.89■□□□□ 0.93
LDLRAD4-205ENST00000585931 CFAP70Q5T0N1 1121 aa20.89■□□□□ 0.93
LDLRAD4-205ENST00000585931 PRKRIP1Q9H875 184 aaPredicted RBP20.89■□□□□ 0.93
LDLRAD4-205ENST00000585931 ARHGEF40Q8TER5 1519 aa20.88■□□□□ 0.93
LDLRAD4-205ENST00000585931 PPP6R1Q9UPN7 881 aa20.87■□□□□ 0.93
LDLRAD4-205ENST00000585931 NRXN1Q9ULB1 1477 aa20.87■□□□□ 0.93
LDLRAD4-205ENST00000585931 MLECQ14165 292 aa20.87■□□□□ 0.93
LDLRAD4-205ENST00000585931 FBXO31Q5XUX0 539 aaPredicted RBP20.87■□□□□ 0.93
LDLRAD4-205ENST00000585931 KIAA1210Q9ULL0 1709 aa20.87■□□□□ 0.93
LDLRAD4-205ENST00000585931 SLC52A1Q9NWF4 448 aa20.86■□□□□ 0.93
LDLRAD4-205ENST00000585931 IQGAP1P46940 1657 aa20.85■□□□□ 0.93
LDLRAD4-205ENST00000585931 PREX1Q8TCU6 1659 aa20.85■□□□□ 0.93
LDLRAD4-205ENST00000585931 PPLO60437 1756 aa20.85■□□□□ 0.93
LDLRAD4-205ENST00000585931 SCAF11Q99590 1463 aaKnown RBP20.84■□□□□ 0.93
LDLRAD4-205ENST00000585931 RPGRIP1LQ68CZ1 1315 aa20.84■□□□□ 0.93
LDLRAD4-205ENST00000585931 DISP3Q9P2K9 1392 aa20.84■□□□□ 0.93
LDLRAD4-205ENST00000585931 CLTCQ00610 1675 aaKnown RBP20.82■□□□□ 0.92
LDLRAD4-205ENST00000585931 TMF1P82094 1093 aa20.81■□□□□ 0.92
LDLRAD4-205ENST00000585931 NUTM2DQ5VT03 806 aaPredicted RBP20.8■□□□□ 0.92
LDLRAD4-205ENST00000585931 PIK3C2GO75747 1445 aa20.8■□□□□ 0.92
LDLRAD4-205ENST00000585931 CCDC184Q52MB2 194 aa20.8■□□□□ 0.92
LDLRAD4-205ENST00000585931 ERVK-7P63135 1459 aa20.79■□□□□ 0.92
LDLRAD4-205ENST00000585931 TRHP20396 242 aaPredicted RBP20.78■□□□□ 0.92
LDLRAD4-205ENST00000585931 C14orf93Q9H972 538 aaKnown RBP20.78■□□□□ 0.92
LDLRAD4-205ENST00000585931 NEXMIFQ5QGS0 1516 aa20.77■□□□□ 0.92
LDLRAD4-205ENST00000585931 CNGB1Q14028 1251 aaPredicted RBP20.77■□□□□ 0.92
LDLRAD4-205ENST00000585931 VGFO15240 615 aaPredicted RBP20.76■□□□□ 0.91
LDLRAD4-205ENST00000585931 MYO5BQ9ULV0 1848 aa20.76■□□□□ 0.91
LDLRAD4-205ENST00000585931 TMEM131LA2VDJ0 1609 aa20.75■□□□□ 0.91
LDLRAD4-205ENST00000585931 EIF3AQ14152 1382 aaKnown RBP20.75■□□□□ 0.91
LDLRAD4-205ENST00000585931 SETBP1Q9Y6X0 1596 aa20.73■□□□□ 0.91
LDLRAD4-205ENST00000585931 TMEM132EQ6IEE7 984 aa20.72■□□□□ 0.91
LDLRAD4-205ENST00000585931 ZMYM3Q14202 1370 aa20.71■□□□□ 0.91
LDLRAD4-205ENST00000585931 ESF1Q9H501 851 aaKnown RBP20.71■□□□□ 0.91
LDLRAD4-205ENST00000585931 SPATA31D1Q6ZQQ2 1576 aa20.71■□□□□ 0.91
LDLRAD4-205ENST00000585931 ADGRB1O14514 1584 aa20.71■□□□□ 0.91
LDLRAD4-205ENST00000585931 PER1O15534 1290 aaPredicted RBP20.71■□□□□ 0.91
LDLRAD4-205ENST00000585931 ZFYVE9O95405 1425 aa20.7■□□□□ 0.9
LDLRAD4-205ENST00000585931 MRS2Q9HD23 443 aa20.69■□□□□ 0.9
LDLRAD4-205ENST00000585931 PANK3Q9H999 370 aa20.69■□□□□ 0.9
LDLRAD4-205ENST00000585931 TRAK1Q9UPV9 953 aa20.69■□□□□ 0.9
LDLRAD4-205ENST00000585931 STAG3Q9UJ98 1225 aa20.68■□□□□ 0.9
LDLRAD4-205ENST00000585931 CDCA8Q53HL2 280 aa20.66■□□□□ 0.9
LDLRAD4-205ENST00000585931 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
LDLRAD4-205ENST00000585931 MYO3AQ8NEV4 1616 aa20.64■□□□□ 0.89
LDLRAD4-205ENST00000585931 CENPJQ9HC77 1338 aaPredicted RBP20.63■□□□□ 0.89
LDLRAD4-205ENST00000585931 SLC24A1O60721 1099 aa20.63■□□□□ 0.89
LDLRAD4-205ENST00000585931 FAM9BQ8IZU0 186 aa20.63■□□□□ 0.89
LDLRAD4-205ENST00000585931 A2ML1A8K2U0 1454 aa20.63■□□□□ 0.89
LDLRAD4-205ENST00000585931 RALBP1Q15311 655 aa20.62■□□□□ 0.89
LDLRAD4-205ENST00000585931 SBNO2Q9Y2G9 1366 aa20.61■□□□□ 0.89
LDLRAD4-205ENST00000585931 KTN1Q86UP2 1357 aaKnown RBP20.6■□□□□ 0.89
LDLRAD4-205ENST00000585931 HNRNPUQ00839 825 aaKnown RBP eCLIP20.59■□□□□ 0.89
LDLRAD4-205ENST00000585931 ANP32EQ9BTT0 268 aa20.59■□□□□ 0.89
LDLRAD4-205ENST00000585931 KDM5AP29375 1690 aaKnown RBP20.58■□□□□ 0.89
LDLRAD4-205ENST00000585931 PARD3Q8TEW0 1356 aa20.57■□□□□ 0.88
LDLRAD4-205ENST00000585931 CC2D1BQ5T0F9 858 aaKnown RBP20.57■□□□□ 0.88
LDLRAD4-205ENST00000585931 MYBBP1AQ9BQG0 1328 aaKnown RBP20.57■□□□□ 0.88
LDLRAD4-205ENST00000585931 ASXL1Q8IXJ9 1541 aa20.57■□□□□ 0.88
LDLRAD4-205ENST00000585931 MYOM1P52179 1685 aa20.57■□□□□ 0.88
LDLRAD4-205ENST00000585931 TNRQ92752 1358 aa20.56■□□□□ 0.88
LDLRAD4-205ENST00000585931 QRICH2Q9H0J4 1663 aa20.56■□□□□ 0.88
LDLRAD4-205ENST00000585931 RIMS2Q9UQ26 1411 aa20.56■□□□□ 0.88
LDLRAD4-205ENST00000585931 ARHGEF28Q8N1W1 1705 aaKnown RBP20.55■□□□□ 0.88
LDLRAD4-205ENST00000585931 CEBPAP49715 358 aaPredicted RBP20.54■□□□□ 0.88
LDLRAD4-205ENST00000585931 STK26Q9P289 416 aa20.54■□□□□ 0.88
LDLRAD4-205ENST00000585931 TMC1Q8TDI8 760 aa20.54■□□□□ 0.88
LDLRAD4-205ENST00000585931 ALKQ9UM73 1620 aa20.53■□□□□ 0.88
LDLRAD4-205ENST00000585931 KNSTRNQ9Y448 316 aa20.53■□□□□ 0.88
LDLRAD4-205ENST00000585931 PNISRQ8TF01 805 aaKnown RBP20.52■□□□□ 0.88
LDLRAD4-205ENST00000585931 AMER1Q5JTC6 1135 aaPredicted RBP20.51■□□□□ 0.87
LDLRAD4-205ENST00000585931 BRD4O60885 1362 aaPredicted RBP20.51■□□□□ 0.87
LDLRAD4-205ENST00000585931 YTHDC2Q9H6S0 1430 aaKnown RBP20.5■□□□□ 0.87
LDLRAD4-205ENST00000585931 SAFB2Q14151 953 aaKnown RBP eCLIP20.5■□□□□ 0.87
LDLRAD4-205ENST00000585931 NLRP13Q86W25 1043 aa20.49■□□□□ 0.87
LDLRAD4-205ENST00000585931 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.47■□□□□ 0.87
LDLRAD4-205ENST00000585931 PTPRMP28827 1452 aa20.47■□□□□ 0.87
LDLRAD4-205ENST00000585931 CARD14Q9BXL6 1004 aa20.47■□□□□ 0.87
LDLRAD4-205ENST00000585931 UBR1Q8IWV7 1749 aa20.46■□□□□ 0.87
LDLRAD4-205ENST00000585931 PLPPR3Q6T4P5 718 aa20.45■□□□□ 0.86
LDLRAD4-205ENST00000585931 PRAM1Q96QH2 718 aa20.45■□□□□ 0.86
LDLRAD4-205ENST00000585931 C3P01024 1663 aa20.45■□□□□ 0.86
LDLRAD4-205ENST00000585931 FER1L4A9Z1Z3 1794 aa20.45■□□□□ 0.86
LDLRAD4-205ENST00000585931 EVC2Q86UK5 1308 aa20.45■□□□□ 0.86
LDLRAD4-205ENST00000585931 SLC12A5Q9H2X9 1139 aa20.45■□□□□ 0.86
LDLRAD4-205ENST00000585931 TULP4Q9NRJ4 1543 aa20.45■□□□□ 0.86
LDLRAD4-205ENST00000585931 SETD1AO15047 1707 aaKnown RBP20.44■□□□□ 0.86
LDLRAD4-205ENST00000585931 TMEM2Q9UHN6 1383 aa20.44■□□□□ 0.86
LDLRAD4-205ENST00000585931 NRXN3Q9Y4C0 1643 aa20.43■□□□□ 0.86
LDLRAD4-205ENST00000585931 HDGFP51858 240 aaKnown RBP20.43■□□□□ 0.86
LDLRAD4-205ENST00000585931 PUS7Q96PZ0 661 aaKnown RBP20.42■□□□□ 0.86
LDLRAD4-205ENST00000585931 NLRP1Q9C000 1473 aa20.42■□□□□ 0.86
LDLRAD4-205ENST00000585931 LRPPRCP42704 1394 aaKnown RBP20.42■□□□□ 0.86
LDLRAD4-205ENST00000585931 CABP2Q9NPB3 220 aa20.42■□□□□ 0.86
LDLRAD4-205ENST00000585931 POGKQ9P215 609 aa20.42■□□□□ 0.86
LDLRAD4-205ENST00000585931 NPC1L1Q9UHC9 1359 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms