RNA–Protein interactions for RNA: ENST00000585025.1

AC004253.2-201, humanhuman

TSL 3 BASIC

Gene AC004253.2, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004253.2-201ENST00000585025 NEURL4Q96JN8 1562 aa13.57□□□□□ -0.24
AC004253.2-201ENST00000585025 PTPRTO14522 1441 aa13.56□□□□□ -0.24
AC004253.2-201ENST00000585025 RIMS2Q9UQ26 1411 aa13.56□□□□□ -0.24
AC004253.2-201ENST00000585025 SLIT1O75093 1534 aa13.56□□□□□ -0.24
AC004253.2-201ENST00000585025 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.55□□□□□ -0.24
AC004253.2-201ENST00000585025 ARHGAP23Q9P227 1491 aa13.54□□□□□ -0.24
AC004253.2-201ENST00000585025 RGL3Q3MIN7 710 aa13.52□□□□□ -0.25
AC004253.2-201ENST00000585025 LTKP29376 864 aa13.51□□□□□ -0.25
AC004253.2-201ENST00000585025 MED14O60244 1454 aa13.5□□□□□ -0.25
AC004253.2-201ENST00000585025 ZNF335Q9H4Z2 1342 aaPredicted RBP13.5□□□□□ -0.25
AC004253.2-201ENST00000585025 SLC26A8Q96RN1 970 aa13.49□□□□□ -0.25
AC004253.2-201ENST00000585025 PPLO60437 1756 aa13.49□□□□□ -0.25
AC004253.2-201ENST00000585025 NEXMIFQ5QGS0 1516 aa13.48□□□□□ -0.25
AC004253.2-201ENST00000585025 ZFYVE9O95405 1425 aa13.47□□□□□ -0.25
AC004253.2-201ENST00000585025 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
AC004253.2-201ENST00000585025 DIP2AQ14689 1571 aa13.46□□□□□ -0.25
AC004253.2-201ENST00000585025 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
AC004253.2-201ENST00000585025 VGFO15240 615 aaPredicted RBP13.45□□□□□ -0.26
AC004253.2-201ENST00000585025 CPS1P31327 1500 aa13.44□□□□□ -0.26
AC004253.2-201ENST00000585025 CLSPNQ9HAW4 1339 aa13.44□□□□□ -0.26
AC004253.2-201ENST00000585025 CERKQ8TCT0 537 aa13.44□□□□□ -0.26
AC004253.2-201ENST00000585025 IFT172Q9UG01 1749 aa13.44□□□□□ -0.26
AC004253.2-201ENST00000585025 RPGRIP1LQ68CZ1 1315 aa13.43□□□□□ -0.26
AC004253.2-201ENST00000585025 SCAF1Q9H7N4 1312 aaKnown RBP13.43□□□□□ -0.26
AC004253.2-201ENST00000585025 C14orf37Q86TY3 774 aa13.43□□□□□ -0.26
AC004253.2-201ENST00000585025 NEUROD1Q13562 356 aa13.42□□□□□ -0.26
AC004253.2-201ENST00000585025 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
AC004253.2-201ENST00000585025 ANKRD30BQ9BXX2 1392 aa13.42□□□□□ -0.26
AC004253.2-201ENST00000585025 SETBP1Q9Y6X0 1596 aa13.41□□□□□ -0.26
AC004253.2-201ENST00000585025 STRCP1A6NGW2 1772 aa13.4□□□□□ -0.26
AC004253.2-201ENST00000585025 LTBP4Q8N2S1 1624 aa13.4□□□□□ -0.26
AC004253.2-201ENST00000585025 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
AC004253.2-201ENST00000585025 DCAF11Q8TEB1 546 aa13.39□□□□□ -0.27
AC004253.2-201ENST00000585025 NRXN3Q9Y4C0 1643 aa13.39□□□□□ -0.27
AC004253.2-201ENST00000585025 SPATA31E1Q6ZUB1 1445 aa13.39□□□□□ -0.27
AC004253.2-201ENST00000585025 PROSER2Q86WR7 435 aaPredicted RBP13.38□□□□□ -0.27
AC004253.2-201ENST00000585025 LAMC1P11047 1609 aa13.38□□□□□ -0.27
AC004253.2-201ENST00000585025 TBX22Q9Y458 520 aa13.37□□□□□ -0.27
AC004253.2-201ENST00000585025 NWD1Q149M9 1564 aa13.37□□□□□ -0.27
AC004253.2-201ENST00000585025 NKTRP30414 1462 aaKnown RBP13.36□□□□□ -0.27
AC004253.2-201ENST00000585025 ALKQ9UM73 1620 aa13.36□□□□□ -0.27
AC004253.2-201ENST00000585025 UBAP1LF5GYI3 381 aa13.36□□□□□ -0.27
AC004253.2-201ENST00000585025 KCNA6P17658 529 aa13.36□□□□□ -0.27
AC004253.2-201ENST00000585025 ADAMTS13Q76LX8 1427 aa13.36□□□□□ -0.27
AC004253.2-201ENST00000585025 ADGRF5Q8IZF2 1346 aa13.36□□□□□ -0.27
AC004253.2-201ENST00000585025 MYOM2P54296 1465 aa13.35□□□□□ -0.27
AC004253.2-201ENST00000585025 IQSEC2Q5JU85 1478 aa13.35□□□□□ -0.27
AC004253.2-201ENST00000585025 TONSLQ96HA7 1378 aa13.34□□□□□ -0.27
AC004253.2-201ENST00000585025 PIP4K2BP78356 416 aa13.34□□□□□ -0.27
AC004253.2-201ENST00000585025 RBM33Q96EV2 1170 aaKnown RBP13.34□□□□□ -0.27
AC004253.2-201ENST00000585025 AMOTL2Q9Y2J4 779 aa13.34□□□□□ -0.27
AC004253.2-201ENST00000585025 LRRC7Q96NW7 1537 aa13.34□□□□□ -0.27
AC004253.2-201ENST00000585025 MSH6P52701 1360 aa13.33□□□□□ -0.27
AC004253.2-201ENST00000585025 PIK3R4Q99570 1358 aa13.33□□□□□ -0.27
AC004253.2-201ENST00000585025 CCER1Q8TC90 406 aaPredicted RBP13.33□□□□□ -0.28
AC004253.2-201ENST00000585025 SIN3AQ96ST3 1273 aa13.33□□□□□ -0.28
AC004253.2-201ENST00000585025 STK26Q9P289 416 aa13.33□□□□□ -0.28
AC004253.2-201ENST00000585025 SETD1AO15047 1707 aaKnown RBP13.33□□□□□ -0.28
AC004253.2-201ENST00000585025 TOM1O60784 492 aa13.32□□□□□ -0.28
AC004253.2-201ENST00000585025 FBXO41Q8TF61 875 aa13.32□□□□□ -0.28
AC004253.2-201ENST00000585025 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
AC004253.2-201ENST00000585025 METP08581 1390 aa13.32□□□□□ -0.28
AC004253.2-201ENST00000585025 TMEM94Q12767 1356 aa13.32□□□□□ -0.28
AC004253.2-201ENST00000585025 PIK3C2GO75747 1445 aa13.31□□□□□ -0.28
AC004253.2-201ENST00000585025 XRN1Q8IZH2 1706 aaKnown RBP13.31□□□□□ -0.28
AC004253.2-201ENST00000585025 ATF3P18847 181 aa13.28□□□□□ -0.28
AC004253.2-201ENST00000585025 CFAP70Q5T0N1 1121 aa13.28□□□□□ -0.28
AC004253.2-201ENST00000585025 TMEM132EQ6IEE7 984 aa13.28□□□□□ -0.28
AC004253.2-201ENST00000585025 PTPRUQ92729 1446 aa13.28□□□□□ -0.28
AC004253.2-201ENST00000585025 KNDC1Q76NI1 1749 aa13.27□□□□□ -0.28
AC004253.2-201ENST00000585025 STAC3Q96MF2 364 aa13.27□□□□□ -0.29
AC004253.2-201ENST00000585025 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
AC004253.2-201ENST00000585025 NALCNQ8IZF0 1738 aa13.26□□□□□ -0.29
AC004253.2-201ENST00000585025 POGKQ9P215 609 aa13.26□□□□□ -0.29
AC004253.2-201ENST00000585025 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.25□□□□□ -0.29
AC004253.2-201ENST00000585025 YTHDC2Q9H6S0 1430 aaKnown RBP13.25□□□□□ -0.29
AC004253.2-201ENST00000585025 L3MBTL2Q969R5 705 aa13.25□□□□□ -0.29
AC004253.2-201ENST00000585025 NRXN1Q9ULB1 1477 aa13.24□□□□□ -0.29
AC004253.2-201ENST00000585025 PTCH1Q13635 1447 aa13.24□□□□□ -0.29
AC004253.2-201ENST00000585025 SAFB2Q14151 953 aaKnown RBP eCLIP13.24□□□□□ -0.29
AC004253.2-201ENST00000585025 KIAA1210Q9ULL0 1709 aa13.24□□□□□ -0.29
AC004253.2-201ENST00000585025 ASXL1Q8IXJ9 1541 aa13.23□□□□□ -0.29
AC004253.2-201ENST00000585025 C14orf93Q9H972 538 aaKnown RBP13.23□□□□□ -0.29
AC004253.2-201ENST00000585025 TIMELESSQ9UNS1 1208 aa13.23□□□□□ -0.29
AC004253.2-201ENST00000585025 TRAK1Q9UPV9 953 aa13.23□□□□□ -0.29
AC004253.2-201ENST00000585025 LRPPRCP42704 1394 aaKnown RBP13.22□□□□□ -0.29
AC004253.2-201ENST00000585025 CADPS2Q86UW7 1296 aa13.22□□□□□ -0.29
AC004253.2-201ENST00000585025 PRAG1Q86YV5 1406 aa13.22□□□□□ -0.29
AC004253.2-201ENST00000585025 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
AC004253.2-201ENST00000585025 ROCK2O75116 1388 aaKnown RBP13.21□□□□□ -0.29
AC004253.2-201ENST00000585025 ROBO2Q9HCK4 1378 aa13.21□□□□□ -0.29
AC004253.2-201ENST00000585025 C19orf44Q9H6X5 657 aa13.21□□□□□ -0.29
AC004253.2-201ENST00000585025 ROBO1Q9Y6N7 1651 aa13.21□□□□□ -0.3
AC004253.2-201ENST00000585025 NCOA3Q9Y6Q9 1424 aa13.21□□□□□ -0.3
AC004253.2-201ENST00000585025 TRPM1Q7Z4N2 1603 aa13.21□□□□□ -0.3
AC004253.2-201ENST00000585025 ARHGEF28Q8N1W1 1705 aaKnown RBP13.19□□□□□ -0.3
AC004253.2-201ENST00000585025 WAPLQ7Z5K2 1190 aa13.19□□□□□ -0.3
AC004253.2-201ENST00000585025 PRAM1Q96QH2 718 aa13.19□□□□□ -0.3
AC004253.2-201ENST00000585025 PHLPP1O60346 1717 aa13.17□□□□□ -0.3
AC004253.2-201ENST00000585025 ADGRB1O14514 1584 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms