RNA–Protein interactions for RNA: ENST00000585025.1

AC004253.2-201, humanhuman

TSL 3 BASIC

Gene AC004253.2, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004253.2-201ENST00000585025 NISCHQ9Y2I1 1504 aa22.06■■□□□ 1.12
AC004253.2-201ENST00000585025 CCDC180Q9P1Z9 1646 aa19.66■□□□□ 0.74
AC004253.2-201ENST00000585025 ABCC9O60706 1549 aa19.2■□□□□ 0.66
AC004253.2-201ENST00000585025 DCAF8L2P0C7V8 631 aa18.62■□□□□ 0.57
AC004253.2-201ENST00000585025 RB1CC1Q8TDY2 1594 aa18.5■□□□□ 0.55
AC004253.2-201ENST00000585025 NACADO15069 1562 aa18.42■□□□□ 0.54
AC004253.2-201ENST00000585025 ZCCHC6Q5VYS8 1495 aaKnown RBP18.39■□□□□ 0.54
AC004253.2-201ENST00000585025 MYO15BQ96JP2 1530 aa18.22■□□□□ 0.51
AC004253.2-201ENST00000585025 DCAF1Q9Y4B6 1507 aa18.19■□□□□ 0.5
AC004253.2-201ENST00000585025 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
AC004253.2-201ENST00000585025 SCRIBQ14160 1630 aa18.03■□□□□ 0.48
AC004253.2-201ENST00000585025 PABPN1Q86U42 306 aaKnown RBP eCLIP17.91■□□□□ 0.46
AC004253.2-201ENST00000585025 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
AC004253.2-201ENST00000585025 SHROOM4Q9ULL8 1493 aa17.65■□□□□ 0.42
AC004253.2-201ENST00000585025 EIF4G1Q04637 1599 aaKnown RBP17.4■□□□□ 0.38
AC004253.2-201ENST00000585025 CC2D2AQ9P2K1 1620 aa17.34■□□□□ 0.37
AC004253.2-201ENST00000585025 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
AC004253.2-201ENST00000585025 CECR2Q9BXF3 1484 aa17.2■□□□□ 0.34
AC004253.2-201ENST00000585025 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
AC004253.2-201ENST00000585025 BAZ1AQ9NRL2 1556 aaPredicted RBP17.16■□□□□ 0.34
AC004253.2-201ENST00000585025 SMARCA2P51531 1590 aa17.04■□□□□ 0.32
AC004253.2-201ENST00000585025 MROH2BQ7Z745 1585 aa17.01■□□□□ 0.31
AC004253.2-201ENST00000585025 ATAD2BQ9ULI0 1458 aa16.98■□□□□ 0.31
AC004253.2-201ENST00000585025 BAZ1BQ9UIG0 1483 aaKnown RBP16.96■□□□□ 0.31
AC004253.2-201ENST00000585025 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
AC004253.2-201ENST00000585025 WIZO95785 1651 aa16.91■□□□□ 0.3
AC004253.2-201ENST00000585025 NCAPD3P42695 1498 aa16.91■□□□□ 0.3
AC004253.2-201ENST00000585025 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.29
AC004253.2-201ENST00000585025 RSF1Q96T23 1441 aaPredicted RBP16.8■□□□□ 0.28
AC004253.2-201ENST00000585025 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
AC004253.2-201ENST00000585025 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
AC004253.2-201ENST00000585025 SUPT5HO00267 1087 aaKnown RBP16.63■□□□□ 0.25
AC004253.2-201ENST00000585025 NESP48681 1621 aa16.58■□□□□ 0.24
AC004253.2-201ENST00000585025 LAMC3Q9Y6N6 1575 aa16.57■□□□□ 0.24
AC004253.2-201ENST00000585025 KIF21AQ7Z4S6 1674 aa16.48■□□□□ 0.23
AC004253.2-201ENST00000585025 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
AC004253.2-201ENST00000585025 CCDC88BA6NC98 1476 aa16.46■□□□□ 0.23
AC004253.2-201ENST00000585025 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
AC004253.2-201ENST00000585025 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
AC004253.2-201ENST00000585025 CFTRP13569 1480 aa16.37■□□□□ 0.21
AC004253.2-201ENST00000585025 CEP164Q9UPV0 1460 aa16.37■□□□□ 0.21
AC004253.2-201ENST00000585025 FANCD2Q9BXW9 1451 aa16.35■□□□□ 0.21
AC004253.2-201ENST00000585025 THOC2Q8NI27 1593 aaKnown RBP16.32■□□□□ 0.2
AC004253.2-201ENST00000585025 MRC2Q9UBG0 1479 aa16.29■□□□□ 0.2
AC004253.2-201ENST00000585025 CUX2O14529 1486 aa16.29■□□□□ 0.2
AC004253.2-201ENST00000585025 WDR62O43379 1518 aa16.19■□□□□ 0.18
AC004253.2-201ENST00000585025 URB2Q14146 1524 aaKnown RBP16.14■□□□□ 0.17
AC004253.2-201ENST00000585025 DNMBPQ6XZF7 1577 aa16.1■□□□□ 0.17
AC004253.2-201ENST00000585025 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
AC004253.2-201ENST00000585025 TOPBP1Q92547 1522 aa16.08■□□□□ 0.16
AC004253.2-201ENST00000585025 CUX1P39880 1505 aa15.97■□□□□ 0.15
AC004253.2-201ENST00000585025 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
AC004253.2-201ENST00000585025 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
AC004253.2-201ENST00000585025 POLA1P09884 1462 aaPredicted RBP15.94■□□□□ 0.14
AC004253.2-201ENST00000585025 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.14
AC004253.2-201ENST00000585025 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
AC004253.2-201ENST00000585025 SYNJ1O43426 1573 aa15.89■□□□□ 0.13
AC004253.2-201ENST00000585025 EIF4G3O43432 1585 aaKnown RBP15.89■□□□□ 0.13
AC004253.2-201ENST00000585025 SOGA1O94964 1423 aa15.89■□□□□ 0.13
AC004253.2-201ENST00000585025 TOP2BQ02880 1626 aa15.89■□□□□ 0.13
AC004253.2-201ENST00000585025 RAD54L2Q9Y4B4 1467 aa15.88■□□□□ 0.13
AC004253.2-201ENST00000585025 TARBP1Q13395 1621 aaKnown RBP15.87■□□□□ 0.13
AC004253.2-201ENST00000585025 ZNF608Q9ULD9 1512 aaPredicted RBP15.86■□□□□ 0.13
AC004253.2-201ENST00000585025 WDR97A6NE52 1622 aa15.82■□□□□ 0.12
AC004253.2-201ENST00000585025 PBRM1Q86U86 1689 aa15.79■□□□□ 0.12
AC004253.2-201ENST00000585025 AQRO60306 1485 aaKnown RBP eCLIP15.79■□□□□ 0.12
AC004253.2-201ENST00000585025 TDRD9Q8NDG6 1382 aaKnown RBP15.78■□□□□ 0.12
AC004253.2-201ENST00000585025 FBLN2P98095 1184 aa15.75■□□□□ 0.11
AC004253.2-201ENST00000585025 ABCA10Q8WWZ4 1543 aa15.74■□□□□ 0.11
AC004253.2-201ENST00000585025 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
AC004253.2-201ENST00000585025 CHD1O14646 1710 aa15.72■□□□□ 0.11
AC004253.2-201ENST00000585025 ABCA5Q8WWZ7 1642 aa15.71■□□□□ 0.11
AC004253.2-201ENST00000585025 GRIN2BQ13224 1484 aa15.71■□□□□ 0.1
AC004253.2-201ENST00000585025 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.1
AC004253.2-201ENST00000585025 TRIM41Q8WV44 630 aa15.68■□□□□ 0.1
AC004253.2-201ENST00000585025 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
AC004253.2-201ENST00000585025 CHMP7Q8WUX9 453 aaPredicted RBP15.64■□□□□ 0.09
AC004253.2-201ENST00000585025 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
AC004253.2-201ENST00000585025 KIF27Q86VH2 1401 aa15.61■□□□□ 0.09
AC004253.2-201ENST00000585025 ADAMTS12P58397 1594 aa15.59■□□□□ 0.09
AC004253.2-201ENST00000585025 DNAJC5Q9H3Z4 198 aa15.59■□□□□ 0.09
AC004253.2-201ENST00000585025 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
AC004253.2-201ENST00000585025 ERICH3Q5RHP9 1530 aa15.58■□□□□ 0.09
AC004253.2-201ENST00000585025 CUL7Q14999 1698 aa15.55■□□□□ 0.08
AC004253.2-201ENST00000585025 FHAD1B1AJZ9 1412 aa15.52■□□□□ 0.08
AC004253.2-201ENST00000585025 GRIN2AQ12879 1464 aa15.5■□□□□ 0.07
AC004253.2-201ENST00000585025 RUSC2Q8N2Y8 1516 aa15.43■□□□□ 0.06
AC004253.2-201ENST00000585025 CEP170Q5SW79 1584 aa15.42■□□□□ 0.06
AC004253.2-201ENST00000585025 RIMBP3CA6NJZ7 1639 aa15.42■□□□□ 0.06
AC004253.2-201ENST00000585025 RIMBP3BA6NNM3 1639 aa15.42■□□□□ 0.06
AC004253.2-201ENST00000585025 RIMBP3Q9UFD9 1639 aa15.42■□□□□ 0.06
AC004253.2-201ENST00000585025 IGF1RP08069 1367 aa15.41■□□□□ 0.06
AC004253.2-201ENST00000585025 CARMIL1Q5VZK9 1371 aa15.41■□□□□ 0.06
AC004253.2-201ENST00000585025 CHIC1Q5VXU3 224 aa15.41■□□□□ 0.06
AC004253.2-201ENST00000585025 FAM9AQ8IZU1 332 aaPredicted RBP15.41■□□□□ 0.06
AC004253.2-201ENST00000585025 CLASP1Q7Z460 1538 aa15.41■□□□□ 0.06
AC004253.2-201ENST00000585025 ARHGEF11O15085 1522 aa15.39■□□□□ 0.05
AC004253.2-201ENST00000585025 RAPGEF2Q9Y4G8 1499 aa15.36■□□□□ 0.05
AC004253.2-201ENST00000585025 NUP160Q12769 1436 aa15.35■□□□□ 0.05
AC004253.2-201ENST00000585025 EEA1Q15075 1411 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms