RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 UNC13BO14795 1591 aa13.48□□□□□ -0.25
CRLF3-205ENST00000583805 UBAP1LF5GYI3 381 aa13.47□□□□□ -0.25
CRLF3-205ENST00000583805 RPRD2Q5VT52 1461 aaKnown RBP13.47□□□□□ -0.25
CRLF3-205ENST00000583805 ADGRB3O60242 1522 aa13.46□□□□□ -0.25
CRLF3-205ENST00000583805 RRP7BPQ9NSQ0 103 aa13.46□□□□□ -0.25
CRLF3-205ENST00000583805 DISP3Q9P2K9 1392 aa13.45□□□□□ -0.26
CRLF3-205ENST00000583805 IQGAP3Q86VI3 1631 aa13.43□□□□□ -0.26
CRLF3-205ENST00000583805 TOM1O60784 492 aa13.43□□□□□ -0.26
CRLF3-205ENST00000583805 ANKRD50Q9ULJ7 1429 aa13.42□□□□□ -0.26
CRLF3-205ENST00000583805 E9PCH4 1651 aa13.42□□□□□ -0.26
CRLF3-205ENST00000583805 LRRC7Q96NW7 1537 aa13.42□□□□□ -0.26
CRLF3-205ENST00000583805 NOS1P29475 1434 aa13.41□□□□□ -0.26
CRLF3-205ENST00000583805 ALKQ9UM73 1620 aa13.41□□□□□ -0.26
CRLF3-205ENST00000583805 PLCB2Q00722 1185 aa13.4□□□□□ -0.26
CRLF3-205ENST00000583805 EID1Q9Y6B2 187 aa13.4□□□□□ -0.26
CRLF3-205ENST00000583805 CHD2O14647 1828 aaKnown RBP13.4□□□□□ -0.26
CRLF3-205ENST00000583805 TMEM2Q9UHN6 1383 aa13.4□□□□□ -0.26
CRLF3-205ENST00000583805 CHIC2Q9UKJ5 165 aa13.39□□□□□ -0.27
CRLF3-205ENST00000583805 NWD1Q149M9 1564 aa13.39□□□□□ -0.27
CRLF3-205ENST00000583805 TMEM131LA2VDJ0 1609 aa13.39□□□□□ -0.27
CRLF3-205ENST00000583805 ROCK1Q13464 1354 aa13.38□□□□□ -0.27
CRLF3-205ENST00000583805 FAM50AQ14320 339 aaKnown RBP13.38□□□□□ -0.27
CRLF3-205ENST00000583805 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
CRLF3-205ENST00000583805 MED1Q15648 1581 aaPredicted RBP13.37□□□□□ -0.27
CRLF3-205ENST00000583805 SPHKAPQ2M3C7 1700 aa13.37□□□□□ -0.27
CRLF3-205ENST00000583805 TXNDC2Q86VQ3 553 aa13.37□□□□□ -0.27
CRLF3-205ENST00000583805 SLC52A1Q9NWF4 448 aa13.36□□□□□ -0.27
CRLF3-205ENST00000583805 LTKP29376 864 aa13.35□□□□□ -0.27
CRLF3-205ENST00000583805 NKTRP30414 1462 aaKnown RBP13.35□□□□□ -0.27
CRLF3-205ENST00000583805 VASPP50552 380 aaPredicted RBP13.34□□□□□ -0.27
CRLF3-205ENST00000583805 DIP2AQ14689 1571 aa13.33□□□□□ -0.28
CRLF3-205ENST00000583805 PIP4K2BP78356 416 aa13.33□□□□□ -0.28
CRLF3-205ENST00000583805 IDI1Q13907 227 aa13.33□□□□□ -0.28
CRLF3-205ENST00000583805 KIF1BO60333 1816 aa13.32□□□□□ -0.28
CRLF3-205ENST00000583805 ZFYVE9O95405 1425 aa13.3□□□□□ -0.28
CRLF3-205ENST00000583805 SOCS7O14512 581 aa13.3□□□□□ -0.28
CRLF3-205ENST00000583805 HSPA1LP34931 641 aa13.3□□□□□ -0.28
CRLF3-205ENST00000583805 ILDR2Q71H61 639 aa13.3□□□□□ -0.28
CRLF3-205ENST00000583805 ROBO1Q9Y6N7 1651 aa13.3□□□□□ -0.28
CRLF3-205ENST00000583805 HDGFP51858 240 aaKnown RBP13.28□□□□□ -0.28
CRLF3-205ENST00000583805 PROM2Q8N271 834 aa13.28□□□□□ -0.28
CRLF3-205ENST00000583805 PLEKHG1Q9ULL1 1385 aa13.28□□□□□ -0.28
CRLF3-205ENST00000583805 RIMS2Q9UQ26 1411 aa13.27□□□□□ -0.29
CRLF3-205ENST00000583805 KCNA6P17658 529 aa13.26□□□□□ -0.29
CRLF3-205ENST00000583805 HAP1P54257 671 aaPredicted RBP13.26□□□□□ -0.29
CRLF3-205ENST00000583805 PHLPP1O60346 1717 aa13.25□□□□□ -0.29
CRLF3-205ENST00000583805 TRPM2O94759 1503 aa13.25□□□□□ -0.29
CRLF3-205ENST00000583805 FAM135BQ49AJ0 1406 aa13.24□□□□□ -0.29
CRLF3-205ENST00000583805 RRBP1Q9P2E9 1410 aaKnown RBP13.24□□□□□ -0.29
CRLF3-205ENST00000583805 TMEM94Q12767 1356 aa13.24□□□□□ -0.29
CRLF3-205ENST00000583805 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.24□□□□□ -0.29
CRLF3-205ENST00000583805 NCOA3Q9Y6Q9 1424 aa13.23□□□□□ -0.29
CRLF3-205ENST00000583805 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.23□□□□□ -0.29
CRLF3-205ENST00000583805 PPP1R15AO75807 674 aaPredicted RBP13.23□□□□□ -0.29
CRLF3-205ENST00000583805 NUP155O75694 1391 aa13.22□□□□□ -0.29
CRLF3-205ENST00000583805 MSH6P52701 1360 aa13.22□□□□□ -0.29
CRLF3-205ENST00000583805 PIK3R4Q99570 1358 aa13.22□□□□□ -0.29
CRLF3-205ENST00000583805 NRXN3Q9Y4C0 1643 aa13.22□□□□□ -0.29
CRLF3-205ENST00000583805 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
CRLF3-205ENST00000583805 SETBP1Q9Y6X0 1596 aa13.22□□□□□ -0.29
CRLF3-205ENST00000583805 XRN1Q8IZH2 1706 aaKnown RBP13.22□□□□□ -0.29
CRLF3-205ENST00000583805 BCANQ96GW7 911 aa13.21□□□□□ -0.29
CRLF3-205ENST00000583805 SLC26A8Q96RN1 970 aa13.21□□□□□ -0.29
CRLF3-205ENST00000583805 CLTCL1P53675 1640 aa13.21□□□□□ -0.3
CRLF3-205ENST00000583805 PROSER2Q86WR7 435 aaPredicted RBP13.2□□□□□ -0.3
CRLF3-205ENST00000583805 TBX22Q9Y458 520 aa13.19□□□□□ -0.3
CRLF3-205ENST00000583805 ADAMTS13Q76LX8 1427 aa13.19□□□□□ -0.3
CRLF3-205ENST00000583805 IFNLR1Q8IU57 520 aaPredicted RBP13.18□□□□□ -0.3
CRLF3-205ENST00000583805 SETD1AO15047 1707 aaKnown RBP13.18□□□□□ -0.3
CRLF3-205ENST00000583805 PPLO60437 1756 aa13.17□□□□□ -0.3
CRLF3-205ENST00000583805 SHPRHQ149N8 1683 aa13.17□□□□□ -0.3
CRLF3-205ENST00000583805 COL16A1Q07092 1604 aaPredicted RBP13.17□□□□□ -0.3
CRLF3-205ENST00000583805 CHGAP10645 457 aaKnown RBP13.16□□□□□ -0.3
CRLF3-205ENST00000583805 ITGAEP38570 1179 aa13.16□□□□□ -0.3
CRLF3-205ENST00000583805 NEXMIFQ5QGS0 1516 aa13.16□□□□□ -0.3
CRLF3-205ENST00000583805 NAIPQ13075 1403 aa13.15□□□□□ -0.3
CRLF3-205ENST00000583805 AHDC1Q5TGY3 1603 aaPredicted RBP13.15□□□□□ -0.3
CRLF3-205ENST00000583805 HFM1A2PYH4 1435 aa13.13□□□□□ -0.31
CRLF3-205ENST00000583805 DCCP43146 1447 aa13.13□□□□□ -0.31
CRLF3-205ENST00000583805 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
CRLF3-205ENST00000583805 NALCNQ8IZF0 1738 aa13.13□□□□□ -0.31
CRLF3-205ENST00000583805 POLA2Q14181 598 aa13.12□□□□□ -0.31
CRLF3-205ENST00000583805 IFT172Q9UG01 1749 aa13.12□□□□□ -0.31
CRLF3-205ENST00000583805 VSIG10Q8N0Z9 540 aa13.11□□□□□ -0.31
CRLF3-205ENST00000583805 CADPS2Q86UW7 1296 aa13.1□□□□□ -0.31
CRLF3-205ENST00000583805 PPARGC1BQ86YN6 1023 aaKnown RBP13.1□□□□□ -0.31
CRLF3-205ENST00000583805 SLAIN2Q9P270 581 aa13.1□□□□□ -0.31
CRLF3-205ENST00000583805 JCADQ9P266 1359 aa13.09□□□□□ -0.31
CRLF3-205ENST00000583805 C14orf37Q86TY3 774 aa13.09□□□□□ -0.31
CRLF3-205ENST00000583805 PTPRUQ92729 1446 aa13.08□□□□□ -0.32
CRLF3-205ENST00000583805 ZNF326Q5BKZ1 582 aaKnown RBP13.08□□□□□ -0.32
CRLF3-205ENST00000583805 RBM33Q96EV2 1170 aaKnown RBP13.08□□□□□ -0.32
CRLF3-205ENST00000583805 C19orf44Q9H6X5 657 aa13.08□□□□□ -0.32
CRLF3-205ENST00000583805 ATF3P18847 181 aa13.07□□□□□ -0.32
CRLF3-205ENST00000583805 NUTM2DQ5VT03 806 aaPredicted RBP13.07□□□□□ -0.32
CRLF3-205ENST00000583805 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.07□□□□□ -0.32
CRLF3-205ENST00000583805 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
CRLF3-205ENST00000583805 LAMC1P11047 1609 aa13.06□□□□□ -0.32
CRLF3-205ENST00000583805 KNDC1Q76NI1 1749 aa13.06□□□□□ -0.32
CRLF3-205ENST00000583805 AMOTL2Q9Y2J4 779 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms