RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 GNAI1P63096 354 aa20.12■□□□□ 0.81
ERBB2-214ENST00000583038 IFFO2Q5TF58 517 aa20.12■□□□□ 0.81
ERBB2-214ENST00000583038 LRRC9Q6ZRR7 1453 aa20.12■□□□□ 0.81
ERBB2-214ENST00000583038 FANCIQ9NVI1 1328 aa20.12■□□□□ 0.81
ERBB2-214ENST00000583038 DDX58O95786 925 aaKnown RBP20.12■□□□□ 0.81
ERBB2-214ENST00000583038 TTC5Q8N0Z6 440 aa20.12■□□□□ 0.81
ERBB2-214ENST00000583038 G3V3G9 751 aa20.12■□□□□ 0.81
ERBB2-214ENST00000583038 DCAF8Q5TAQ9 597 aa20.12■□□□□ 0.81
ERBB2-214ENST00000583038 CASKIN1Q8WXD9 1431 aa20.12■□□□□ 0.81
ERBB2-214ENST00000583038 KIF7Q2M1P5 1343 aa20.11■□□□□ 0.81
ERBB2-214ENST00000583038 C9orf78Q9NZ63 289 aaPredicted RBP20.1■□□□□ 0.81
ERBB2-214ENST00000583038 CNTLNQ9NXG0 1405 aa20.1■□□□□ 0.81
ERBB2-214ENST00000583038 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
ERBB2-214ENST00000583038 TPM3P06753 285 aa20.09■□□□□ 0.81
ERBB2-214ENST00000583038 HSP90AB4PQ58FF6 505 aa20.09■□□□□ 0.81
ERBB2-214ENST00000583038 NOC3LQ8WTT2 800 aaKnown RBP20.08■□□□□ 0.81
ERBB2-214ENST00000583038 BRD4O60885 1362 aaPredicted RBP20.08■□□□□ 0.81
ERBB2-214ENST00000583038 SYNE3Q6ZMZ3 975 aa20.07■□□□□ 0.8
ERBB2-214ENST00000583038 AKAP17AQ02040 695 aaKnown RBP20.07■□□□□ 0.8
ERBB2-214ENST00000583038 KIF21BO75037 1637 aa20.07■□□□□ 0.8
ERBB2-214ENST00000583038 WASHC2AQ641Q2 1341 aa20.06■□□□□ 0.8
ERBB2-214ENST00000583038 RNF20Q5VTR2 975 aa20.06■□□□□ 0.8
ERBB2-214ENST00000583038 GOLGA6L19H0YKK7 550 aa20.05■□□□□ 0.8
ERBB2-214ENST00000583038 GSE1Q14687 1217 aa20.05■□□□□ 0.8
ERBB2-214ENST00000583038 CHMP5Q9NZZ3 219 aa20.05■□□□□ 0.8
ERBB2-214ENST00000583038 GOLGA6L1Q8N7Z2 621 aa20.05■□□□□ 0.8
ERBB2-214ENST00000583038 RAD54L2Q9Y4B4 1467 aa20.04■□□□□ 0.8
ERBB2-214ENST00000583038 MARCH6O60337 910 aa20.04■□□□□ 0.8
ERBB2-214ENST00000583038 IFIT2P09913 472 aaKnown RBP20.04■□□□□ 0.8
ERBB2-214ENST00000583038 BECN2A8MW95 431 aa20.04■□□□□ 0.8
ERBB2-214ENST00000583038 NCOA2Q15596 1464 aa20.04■□□□□ 0.8
ERBB2-214ENST00000583038 CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
ERBB2-214ENST00000583038 EVA1CP58658 441 aa20.03■□□□□ 0.8
ERBB2-214ENST00000583038 FKBP5Q13451 457 aaPredicted RBP20.03■□□□□ 0.8
ERBB2-214ENST00000583038 ZNF644Q9H582 1327 aaPredicted RBP20.02■□□□□ 0.8
ERBB2-214ENST00000583038 ERICH3Q5RHP9 1530 aa20.02■□□□□ 0.8
ERBB2-214ENST00000583038 EIF2S2P20042 333 aaKnown RBP20.01■□□□□ 0.79
ERBB2-214ENST00000583038 INTS3Q68E01 1043 aaKnown RBP20.01■□□□□ 0.79
ERBB2-214ENST00000583038 RRBP1Q9P2E9 1410 aaKnown RBP20.01■□□□□ 0.79
ERBB2-214ENST00000583038 TSR1Q2NL82 804 aaKnown RBP20.01■□□□□ 0.79
ERBB2-214ENST00000583038 G3BP1Q13283 466 aaKnown RBP eCLIP20.01■□□□□ 0.79
ERBB2-214ENST00000583038 HFM1A2PYH4 1435 aa20■□□□□ 0.79
ERBB2-214ENST00000583038 NUCB2P80303 420 aa20■□□□□ 0.79
ERBB2-214ENST00000583038 PSME1Q06323 249 aa20■□□□□ 0.79
ERBB2-214ENST00000583038 TPM1P09493 284 aa20■□□□□ 0.79
ERBB2-214ENST00000583038 FOXD4L5Q5VV16 416 aaPredicted RBP19.99■□□□□ 0.79
ERBB2-214ENST00000583038 FOXD4L4Q8WXT5 416 aaPredicted RBP19.99■□□□□ 0.79
ERBB2-214ENST00000583038 CEP89Q96ST8 783 aa19.99■□□□□ 0.79
ERBB2-214ENST00000583038 ERC2O15083 957 aa19.99■□□□□ 0.79
ERBB2-214ENST00000583038 AMOTL1Q8IY63 956 aa19.99■□□□□ 0.79
ERBB2-214ENST00000583038 TPD52L1Q16890 204 aaPredicted RBP19.98■□□□□ 0.79
ERBB2-214ENST00000583038 TRIM29Q14134 588 aa19.98■□□□□ 0.79
ERBB2-214ENST00000583038 TSPYL4Q9UJ04 414 aa19.97■□□□□ 0.79
ERBB2-214ENST00000583038 NOL10Q9BSC4 688 aaKnown RBP19.97■□□□□ 0.79
ERBB2-214ENST00000583038 GRIN2BQ13224 1484 aa19.97■□□□□ 0.79
ERBB2-214ENST00000583038 TRDNQ13061 729 aa19.97■□□□□ 0.79
ERBB2-214ENST00000583038 CPLX1O14810 134 aa19.96■□□□□ 0.79
ERBB2-214ENST00000583038 ANO2Q9NQ90 1003 aa19.96■□□□□ 0.79
ERBB2-214ENST00000583038 SCAPERQ9BY12 1400 aa19.96■□□□□ 0.79
ERBB2-214ENST00000583038 TPM2P07951 284 aa19.95■□□□□ 0.78
ERBB2-214ENST00000583038 CREBRFQ8IUR6 639 aa19.95■□□□□ 0.78
ERBB2-214ENST00000583038 RAPGEF4Q8WZA2 1011 aa19.95■□□□□ 0.78
ERBB2-214ENST00000583038 SLC4A3P48751 1232 aa19.95■□□□□ 0.78
ERBB2-214ENST00000583038 MCTP1Q6DN14 999 aa19.94■□□□□ 0.78
ERBB2-214ENST00000583038 SYNJ2O15056 1496 aa19.93■□□□□ 0.78
ERBB2-214ENST00000583038 CCDC47Q96A33 483 aaKnown RBP19.93■□□□□ 0.78
ERBB2-214ENST00000583038 RSPH6AQ9H0K4 717 aa19.93■□□□□ 0.78
ERBB2-214ENST00000583038 HOOK1Q9UJC3 728 aaKnown RBP19.93■□□□□ 0.78
ERBB2-214ENST00000583038 GGNBP2Q9H3C7 697 aa19.92■□□□□ 0.78
ERBB2-214ENST00000583038 FAM69CQ0P6D2 419 aa19.91■□□□□ 0.78
ERBB2-214ENST00000583038 ANKRD20A12PQ8NF67 263 aa19.91■□□□□ 0.78
ERBB2-214ENST00000583038 C22orf23Q9BZE7 217 aa19.91■□□□□ 0.78
ERBB2-214ENST00000583038 WWC1Q8IX03 1113 aa19.91■□□□□ 0.78
ERBB2-214ENST00000583038 EFCAB5A4FU69 1503 aa19.91■□□□□ 0.78
ERBB2-214ENST00000583038 LNPKQ9C0E8 428 aa19.91■□□□□ 0.78
ERBB2-214ENST00000583038 AQRO60306 1485 aaKnown RBP eCLIP19.9■□□□□ 0.789e-7■■■■■ 26.9
ERBB2-214ENST00000583038 PLEKHH2Q8IVE3 1493 aa19.9■□□□□ 0.78
ERBB2-214ENST00000583038 GNAI3P08754 354 aa19.9■□□□□ 0.78
ERBB2-214ENST00000583038 A0A0U1RQG5 324 aaPredicted RBP19.9■□□□□ 0.78
ERBB2-214ENST00000583038 SMC3Q9UQE7 1217 aa19.9■□□□□ 0.78
ERBB2-214ENST00000583038 PES1O00541 588 aaKnown RBP19.9■□□□□ 0.78
ERBB2-214ENST00000583038 CDC45O75419 566 aa19.9■□□□□ 0.78
ERBB2-214ENST00000583038 MTHFSP49914 203 aa19.9■□□□□ 0.78
ERBB2-214ENST00000583038 ADAMTS8Q9UP79 889 aa19.9■□□□□ 0.78
ERBB2-214ENST00000583038 VPS53Q5VIR6 699 aa19.89■□□□□ 0.78
ERBB2-214ENST00000583038 IPO7O95373 1038 aaKnown RBP19.89■□□□□ 0.77
ERBB2-214ENST00000583038 TCP11L2Q8N4U5 519 aa19.88■□□□□ 0.77
ERBB2-214ENST00000583038 GAS2L2Q8NHY3 880 aa19.88■□□□□ 0.77
ERBB2-214ENST00000583038 APPP05067 770 aa19.88■□□□□ 0.77
ERBB2-214ENST00000583038 HMOX1P09601 288 aa19.87■□□□□ 0.77
ERBB2-214ENST00000583038 UBTFL1P0CB47 393 aaPredicted RBP19.87■□□□□ 0.77
ERBB2-214ENST00000583038 PDE3AQ14432 1141 aa19.87■□□□□ 0.77
ERBB2-214ENST00000583038 ARHGAP5Q13017 1502 aa19.87■□□□□ 0.77
ERBB2-214ENST00000583038 BICD2Q8TD16 824 aa19.87■□□□□ 0.77
ERBB2-214ENST00000583038 CCDC70Q6NSX1 233 aa19.87■□□□□ 0.77
ERBB2-214ENST00000583038 NECTIN2Q92692 538 aa19.86■□□□□ 0.77
ERBB2-214ENST00000583038 CABP2Q9NPB3 220 aa19.86■□□□□ 0.77
ERBB2-214ENST00000583038 PRDM2Q13029 1718 aa19.86■□□□□ 0.77
ERBB2-214ENST00000583038 TNNT3P45378 269 aaPredicted RBP19.86■□□□□ 0.77
ERBB2-214ENST00000583038 CFTRP13569 1480 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms