RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 ARHGAP23Q9P227 1491 aa12.23□□□□□ -0.45
KPNB1-213ENST00000583013 NUP155O75694 1391 aa12.23□□□□□ -0.45
KPNB1-213ENST00000583013 NCKAP5LQ9HCH0 1330 aa12.23□□□□□ -0.45
KPNB1-213ENST00000583013 THEMISQ8N1K5 641 aaPredicted RBP12.23□□□□□ -0.45
KPNB1-213ENST00000583013 ABCB7O75027 752 aa12.22□□□□□ -0.45
KPNB1-213ENST00000583013 IQGAP1P46940 1657 aa12.21□□□□□ -0.45
KPNB1-213ENST00000583013 SPHKAPQ2M3C7 1700 aa12.2□□□□□ -0.46
KPNB1-213ENST00000583013 LTBP4Q8N2S1 1624 aa12.2□□□□□ -0.46
KPNB1-213ENST00000583013 SLC52A1Q9NWF4 448 aa12.2□□□□□ -0.46
KPNB1-213ENST00000583013 ANKLE2Q86XL3 938 aa12.19□□□□□ -0.46
KPNB1-213ENST00000583013 NPHP4O75161 1426 aaPredicted RBP12.19□□□□□ -0.46
KPNB1-213ENST00000583013 TMEM131LA2VDJ0 1609 aa12.19□□□□□ -0.46
KPNB1-213ENST00000583013 IDI1Q13907 227 aa12.18□□□□□ -0.46
KPNB1-213ENST00000583013 SCAF11Q99590 1463 aaKnown RBP12.18□□□□□ -0.46
KPNB1-213ENST00000583013 MYO5BQ9ULV0 1848 aa12.18□□□□□ -0.46
KPNB1-213ENST00000583013 TMEM2Q9UHN6 1383 aa12.18□□□□□ -0.46
KPNB1-213ENST00000583013 TRPM2O94759 1503 aa12.16□□□□□ -0.46
KPNB1-213ENST00000583013 IQSEC2Q5JU85 1478 aa12.15□□□□□ -0.46
KPNB1-213ENST00000583013 CERKQ8TCT0 537 aa12.15□□□□□ -0.46
KPNB1-213ENST00000583013 POLA2Q14181 598 aa12.14□□□□□ -0.47
KPNB1-213ENST00000583013 ZFYVE9O95405 1425 aa12.13□□□□□ -0.47
KPNB1-213ENST00000583013 LTKP29376 864 aa12.13□□□□□ -0.47
KPNB1-213ENST00000583013 STAG3Q9UJ98 1225 aa12.13□□□□□ -0.47
KPNB1-213ENST00000583013 ZNF335Q9H4Z2 1342 aaPredicted RBP12.12□□□□□ -0.47
KPNB1-213ENST00000583013 CPS1P31327 1500 aa12.12□□□□□ -0.47
KPNB1-213ENST00000583013 CLTCL1P53675 1640 aa12.12□□□□□ -0.47
KPNB1-213ENST00000583013 TXNDC2Q86VQ3 553 aa12.12□□□□□ -0.47
KPNB1-213ENST00000583013 FBXO41Q8TF61 875 aa12.12□□□□□ -0.47
KPNB1-213ENST00000583013 ACIN1Q9UKV3 1341 aaKnown RBP12.11□□□□□ -0.47
KPNB1-213ENST00000583013 SETD5Q9C0A6 1442 aa12.11□□□□□ -0.47
KPNB1-213ENST00000583013 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
KPNB1-213ENST00000583013 EID1Q9Y6B2 187 aa12.11□□□□□ -0.47
KPNB1-213ENST00000583013 STRCP1A6NGW2 1772 aa12.1□□□□□ -0.47
KPNB1-213ENST00000583013 TRIM52Q96A61 297 aa12.1□□□□□ -0.47
KPNB1-213ENST00000583013 RIMS2Q9UQ26 1411 aa12.1□□□□□ -0.47
KPNB1-213ENST00000583013 KIF1BO60333 1816 aa12.09□□□□□ -0.47
KPNB1-213ENST00000583013 RAB3GAP2Q9H2M9 1393 aa12.07□□□□□ -0.48
KPNB1-213ENST00000583013 PLEKHG1Q9ULL1 1385 aa12.07□□□□□ -0.48
KPNB1-213ENST00000583013 DIP2AQ14689 1571 aa12.06□□□□□ -0.48
KPNB1-213ENST00000583013 NWD1Q149M9 1564 aa12.06□□□□□ -0.48
KPNB1-213ENST00000583013 HDGFP51858 240 aaKnown RBP12.06□□□□□ -0.48
KPNB1-213ENST00000583013 CHGAP10645 457 aaKnown RBP12.05□□□□□ -0.48
KPNB1-213ENST00000583013 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.05□□□□□ -0.483e-6■□□□□ 8.2
KPNB1-213ENST00000583013 NEXMIFQ5QGS0 1516 aa12.05□□□□□ -0.48
KPNB1-213ENST00000583013 MPHOSPH9Q99550 1183 aa12.04□□□□□ -0.48
KPNB1-213ENST00000583013 LRRC7Q96NW7 1537 aa12.04□□□□□ -0.48
KPNB1-213ENST00000583013 SETBP1Q9Y6X0 1596 aa12.04□□□□□ -0.48
KPNB1-213ENST00000583013 NRXN3Q9Y4C0 1643 aa12.03□□□□□ -0.48
KPNB1-213ENST00000583013 CHD2O14647 1828 aaKnown RBP12.02□□□□□ -0.48
KPNB1-213ENST00000583013 XIRP1Q702N8 1843 aaKnown RBP12.02□□□□□ -0.48
KPNB1-213ENST00000583013 PPP1R15AO75807 674 aaPredicted RBP12.02□□□□□ -0.49
KPNB1-213ENST00000583013 HRCP23327 699 aa12.02□□□□□ -0.49
KPNB1-213ENST00000583013 PPLO60437 1756 aa12.02□□□□□ -0.49
KPNB1-213ENST00000583013 ADAMTS13Q76LX8 1427 aa12.02□□□□□ -0.49
KPNB1-213ENST00000583013 NKTRP30414 1462 aaKnown RBP12.02□□□□□ -0.49
KPNB1-213ENST00000583013 CCDC144AA2RUR9 1427 aa12.01□□□□□ -0.49
KPNB1-213ENST00000583013 SLC26A8Q96RN1 970 aa12□□□□□ -0.49
KPNB1-213ENST00000583013 IFT172Q9UG01 1749 aa12□□□□□ -0.49
KPNB1-213ENST00000583013 KCNA6P17658 529 aa11.99□□□□□ -0.49
KPNB1-213ENST00000583013 ZNF326Q5BKZ1 582 aaKnown RBP11.99□□□□□ -0.49
KPNB1-213ENST00000583013 TBX22Q9Y458 520 aa11.99□□□□□ -0.49
KPNB1-213ENST00000583013 PIK3R4Q99570 1358 aa11.99□□□□□ -0.49
KPNB1-213ENST00000583013 SPATA31E1Q6ZUB1 1445 aa11.99□□□□□ -0.49
KPNB1-213ENST00000583013 ALKQ9UM73 1620 aa11.99□□□□□ -0.49
KPNB1-213ENST00000583013 SETD1AO15047 1707 aaKnown RBP11.97□□□□□ -0.49
KPNB1-213ENST00000583013 RPGRIP1LQ68CZ1 1315 aa11.97□□□□□ -0.49
KPNB1-213ENST00000583013 NUTM2DQ5VT03 806 aaPredicted RBP11.97□□□□□ -0.49
KPNB1-213ENST00000583013 BCANQ96GW7 911 aa11.97□□□□□ -0.49
KPNB1-213ENST00000583013 XRN1Q8IZH2 1706 aaKnown RBP11.97□□□□□ -0.49
KPNB1-213ENST00000583013 UBAP1LF5GYI3 381 aa11.95□□□□□ -0.5
KPNB1-213ENST00000583013 TMEM94Q12767 1356 aa11.94□□□□□ -0.5
KPNB1-213ENST00000583013 PTPRUQ92729 1446 aa11.94□□□□□ -0.5
KPNB1-213ENST00000583013 ANKRD30BQ9BXX2 1392 aa11.93□□□□□ -0.5
KPNB1-213ENST00000583013 VGFO15240 615 aaPredicted RBP11.93□□□□□ -0.5
KPNB1-213ENST00000583013 TOM1O60784 492 aa11.93□□□□□ -0.5
KPNB1-213ENST00000583013 NCOA3Q9Y6Q9 1424 aa11.93□□□□□ -0.5
KPNB1-213ENST00000583013 METP08581 1390 aa11.92□□□□□ -0.5
KPNB1-213ENST00000583013 MYOM2P54296 1465 aa11.91□□□□□ -0.5
KPNB1-213ENST00000583013 PROSER2Q86WR7 435 aaPredicted RBP11.91□□□□□ -0.5
KPNB1-213ENST00000583013 ZBTB12Q9Y330 459 aaPredicted RBP11.91□□□□□ -0.5
KPNB1-213ENST00000583013 PRAG1Q86YV5 1406 aa11.91□□□□□ -0.5
KPNB1-213ENST00000583013 NRXN1Q9ULB1 1477 aa11.89□□□□□ -0.51
KPNB1-213ENST00000583013 PIK3C2GO75747 1445 aa11.89□□□□□ -0.51
KPNB1-213ENST00000583013 LAMC1P11047 1609 aa11.89□□□□□ -0.51
KPNB1-213ENST00000583013 PTCH1Q13635 1447 aa11.88□□□□□ -0.51
KPNB1-213ENST00000583013 RGL3Q3MIN7 710 aa11.88□□□□□ -0.51
KPNB1-213ENST00000583013 AMOTL2Q9Y2J4 779 aa11.88□□□□□ -0.51
KPNB1-213ENST00000583013 MSH6P52701 1360 aa11.88□□□□□ -0.51
KPNB1-213ENST00000583013 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.88□□□□□ -0.51
KPNB1-213ENST00000583013 ADGRF5Q8IZF2 1346 aa11.87□□□□□ -0.51
KPNB1-213ENST00000583013 ASXL1Q8IXJ9 1541 aa11.86□□□□□ -0.51
KPNB1-213ENST00000583013 KNDC1Q76NI1 1749 aa11.86□□□□□ -0.51
KPNB1-213ENST00000583013 NALCNQ8IZF0 1738 aa11.86□□□□□ -0.51
KPNB1-213ENST00000583013 PIP4K2BP78356 416 aa11.86□□□□□ -0.51
KPNB1-213ENST00000583013 RBM33Q96EV2 1170 aaKnown RBP11.86□□□□□ -0.51
KPNB1-213ENST00000583013 DCCP43146 1447 aa11.86□□□□□ -0.51
KPNB1-213ENST00000583013 ROBO1Q9Y6N7 1651 aa11.85□□□□□ -0.51
KPNB1-213ENST00000583013 TECPR2O15040 1411 aa11.85□□□□□ -0.51
KPNB1-213ENST00000583013 FAM135BQ49AJ0 1406 aa11.85□□□□□ -0.51
KPNB1-213ENST00000583013 TRIM26Q12899 539 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms