RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 E9PCH4 1651 aa8.9□□□□□ -0.98
PPP4R1-223ENST00000582933 ADGRB3O60242 1522 aa8.9□□□□□ -0.99
PPP4R1-223ENST00000582933 SETD5Q9C0A6 1442 aa8.89□□□□□ -0.99
PPP4R1-223ENST00000582933 PIK3C2BO00750 1634 aa8.88□□□□□ -0.99
PPP4R1-223ENST00000582933 ANP32EQ9BTT0 268 aa8.88□□□□□ -0.99
PPP4R1-223ENST00000582933 PTPRTO14522 1441 aa8.88□□□□□ -0.99
PPP4R1-223ENST00000582933 KDM5AP29375 1690 aaKnown RBP8.88□□□□□ -0.99
PPP4R1-223ENST00000582933 RAB3GAP2Q9H2M9 1393 aa8.87□□□□□ -0.99
PPP4R1-223ENST00000582933 TRPM2O94759 1503 aa8.87□□□□□ -0.99
PPP4R1-223ENST00000582933 NEURL4Q96JN8 1562 aa8.86□□□□□ -0.99
PPP4R1-223ENST00000582933 ACIN1Q9UKV3 1341 aaKnown RBP8.86□□□□□ -0.99
PPP4R1-223ENST00000582933 SLIT1O75093 1534 aa8.86□□□□□ -0.99
PPP4R1-223ENST00000582933 UBR1Q8IWV7 1749 aa8.86□□□□□ -0.99
PPP4R1-223ENST00000582933 ARHGAP23Q9P227 1491 aa8.86□□□□□ -0.99
PPP4R1-223ENST00000582933 STRCQ7RTU9 1775 aa8.86□□□□□ -0.99
PPP4R1-223ENST00000582933 SLC52A1Q9NWF4 448 aa8.85□□□□□ -0.99
PPP4R1-223ENST00000582933 SPHKAPQ2M3C7 1700 aa8.85□□□□□ -0.99
PPP4R1-223ENST00000582933 SCAF11Q99590 1463 aaKnown RBP8.84□□□□□ -0.99
PPP4R1-223ENST00000582933 PKD2Q13563 968 aa8.84□□□□□ -0.99
PPP4R1-223ENST00000582933 THEMISQ8N1K5 641 aaPredicted RBP8.84□□□□□ -0.99
PPP4R1-223ENST00000582933 TMEM2Q9UHN6 1383 aa8.84□□□□□ -0.99
PPP4R1-223ENST00000582933 MED14O60244 1454 aa8.83□□□□□ -1
PPP4R1-223ENST00000582933 POLR1AO95602 1720 aaPredicted RBP8.83□□□□□ -1
PPP4R1-223ENST00000582933 IDI1Q13907 227 aa8.83□□□□□ -1
PPP4R1-223ENST00000582933 TRIM52Q96A61 297 aa8.83□□□□□ -1
PPP4R1-223ENST00000582933 TMEM131LA2VDJ0 1609 aa8.83□□□□□ -1
PPP4R1-223ENST00000582933 ZFYVE9O95405 1425 aa8.82□□□□□ -1
PPP4R1-223ENST00000582933 CLTCL1P53675 1640 aa8.82□□□□□ -1
PPP4R1-223ENST00000582933 NPHP4O75161 1426 aaPredicted RBP8.81□□□□□ -1
PPP4R1-223ENST00000582933 NCKAP5LQ9HCH0 1330 aa8.8□□□□□ -1
PPP4R1-223ENST00000582933 SLC4A2P04920 1241 aa8.8□□□□□ -1
PPP4R1-223ENST00000582933 NEFLP07196 543 aa8.8□□□□□ -1
PPP4R1-223ENST00000582933 ANKLE2Q86XL3 938 aa8.8□□□□□ -1
PPP4R1-223ENST00000582933 STAG3Q9UJ98 1225 aa8.8□□□□□ -1
PPP4R1-223ENST00000582933 IQGAP1P46940 1657 aa8.8□□□□□ -1
PPP4R1-223ENST00000582933 TULP1O00294 542 aaPredicted RBP8.79□□□□□ -1
PPP4R1-223ENST00000582933 PKNOX2Q96KN3 472 aa8.79□□□□□ -1
PPP4R1-223ENST00000582933 MPHOSPH9Q99550 1183 aa8.79□□□□□ -1
PPP4R1-223ENST00000582933 CCDC144AA2RUR9 1427 aa8.79□□□□□ -1
PPP4R1-223ENST00000582933 RIMS2Q9UQ26 1411 aa8.79□□□□□ -1
PPP4R1-223ENST00000582933 EID1Q9Y6B2 187 aa8.78□□□□□ -1
PPP4R1-223ENST00000582933 LTBP4Q8N2S1 1624 aa8.77□□□□□ -1.01
PPP4R1-223ENST00000582933 PLEKHG1Q9ULL1 1385 aa8.77□□□□□ -1.01
PPP4R1-223ENST00000582933 LTKP29376 864 aa8.77□□□□□ -1.01
PPP4R1-223ENST00000582933 TRIM26Q12899 539 aaPredicted RBP8.77□□□□□ -1.01
PPP4R1-223ENST00000582933 CFAP65Q6ZU64 1925 aaKnown RBP8.77□□□□□ -1.01
PPP4R1-223ENST00000582933 SPATA31E1Q6ZUB1 1445 aa8.77□□□□□ -1.01
PPP4R1-223ENST00000582933 NEXMIFQ5QGS0 1516 aa8.76□□□□□ -1.01
PPP4R1-223ENST00000582933 PDIA4P13667 645 aaKnown RBP8.76□□□□□ -1.01
PPP4R1-223ENST00000582933 TXNDC2Q86VQ3 553 aa8.76□□□□□ -1.01
PPP4R1-223ENST00000582933 DIP2AQ14689 1571 aa8.75□□□□□ -1.01
PPP4R1-223ENST00000582933 SETBP1Q9Y6X0 1596 aa8.75□□□□□ -1.01
PPP4R1-223ENST00000582933 CHGAP10645 457 aaKnown RBP8.75□□□□□ -1.01
PPP4R1-223ENST00000582933 ZNF335Q9H4Z2 1342 aaPredicted RBP8.75□□□□□ -1.01
PPP4R1-223ENST00000582933 CPS1P31327 1500 aa8.75□□□□□ -1.01
PPP4R1-223ENST00000582933 ANKRD30BQ9BXX2 1392 aa8.74□□□□□ -1.01
PPP4R1-223ENST00000582933 PPP1R15AO75807 674 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-223ENST00000582933 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.74□□□□□ -1.01
PPP4R1-223ENST00000582933 NWD1Q149M9 1564 aa8.73□□□□□ -1.01
PPP4R1-223ENST00000582933 MYO5BQ9ULV0 1848 aa8.73□□□□□ -1.01
PPP4R1-223ENST00000582933 ADAMTS13Q76LX8 1427 aa8.73□□□□□ -1.01
PPP4R1-223ENST00000582933 IQSEC2Q5JU85 1478 aa8.73□□□□□ -1.01
PPP4R1-223ENST00000582933 NRXN3Q9Y4C0 1643 aa8.72□□□□□ -1.01
PPP4R1-223ENST00000582933 NKTRP30414 1462 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-223ENST00000582933 HDGFP51858 240 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-223ENST00000582933 KIF1BO60333 1816 aa8.72□□□□□ -1.01
PPP4R1-223ENST00000582933 ZNF326Q5BKZ1 582 aaKnown RBP8.71□□□□□ -1.02
PPP4R1-223ENST00000582933 RPGRIP1LQ68CZ1 1315 aa8.71□□□□□ -1.02
PPP4R1-223ENST00000582933 MYOM2P54296 1465 aa8.7□□□□□ -1.02
PPP4R1-223ENST00000582933 DSG3P32926 999 aa8.7□□□□□ -1.02
PPP4R1-223ENST00000582933 PIK3R4Q99570 1358 aa8.7□□□□□ -1.02
PPP4R1-223ENST00000582933 IFT172Q9UG01 1749 aa8.69□□□□□ -1.02
PPP4R1-223ENST00000582933 PPLO60437 1756 aa8.69□□□□□ -1.02
PPP4R1-223ENST00000582933 PDE4CQ08493 712 aa8.69□□□□□ -1.02
PPP4R1-223ENST00000582933 NUTM2DQ5VT03 806 aaPredicted RBP8.69□□□□□ -1.02
PPP4R1-223ENST00000582933 CERKQ8TCT0 537 aa8.69□□□□□ -1.02
PPP4R1-223ENST00000582933 SLC26A8Q96RN1 970 aa8.69□□□□□ -1.02
PPP4R1-223ENST00000582933 DHX57Q6P158 1386 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-223ENST00000582933 PIK3C2GO75747 1445 aa8.69□□□□□ -1.02
PPP4R1-223ENST00000582933 NRXN1Q9ULB1 1477 aa8.69□□□□□ -1.02
PPP4R1-223ENST00000582933 LRRC7Q96NW7 1537 aa8.69□□□□□ -1.02
PPP4R1-223ENST00000582933 MYCNP04198 464 aaPredicted RBP8.68□□□□□ -1.02
PPP4R1-223ENST00000582933 PRAG1Q86YV5 1406 aa8.68□□□□□ -1.02
PPP4R1-223ENST00000582933 XRN1Q8IZH2 1706 aaKnown RBP8.68□□□□□ -1.02
PPP4R1-223ENST00000582933 STRCP1A6NGW2 1772 aa8.68□□□□□ -1.02
PPP4R1-223ENST00000582933 VGFO15240 615 aaPredicted RBP8.67□□□□□ -1.02
PPP4R1-223ENST00000582933 BCANQ96GW7 911 aa8.67□□□□□ -1.02
PPP4R1-223ENST00000582933 TBX22Q9Y458 520 aa8.67□□□□□ -1.02
PPP4R1-223ENST00000582933 SETD1AO15047 1707 aaKnown RBP8.66□□□□□ -1.02
PPP4R1-223ENST00000582933 METP08581 1390 aa8.66□□□□□ -1.02
PPP4R1-223ENST00000582933 ATXN8OSP0DMR3 200 aa8.66□□□□□ -1.02
PPP4R1-223ENST00000582933 KCNA6P17658 529 aa8.66□□□□□ -1.02
PPP4R1-223ENST00000582933 ERICH6BQ5W0A0 696 aa8.66□□□□□ -1.02
PPP4R1-223ENST00000582933 ANO8Q9HCE9 1232 aaPredicted RBP8.66□□□□□ -1.02
PPP4R1-223ENST00000582933 LAMC1P11047 1609 aa8.65□□□□□ -1.02
PPP4R1-223ENST00000582933 ALKQ9UM73 1620 aa8.65□□□□□ -1.02
PPP4R1-223ENST00000582933 ASXL1Q8IXJ9 1541 aa8.65□□□□□ -1.02
PPP4R1-223ENST00000582933 PTCH1Q13635 1447 aa8.65□□□□□ -1.02
PPP4R1-223ENST00000582933 PTPRUQ92729 1446 aa8.65□□□□□ -1.02
PPP4R1-223ENST00000582933 TMEM94Q12767 1356 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms