RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 EFCAB6Q5THR3 1501 aa18.32■□□□□ 0.52
SRSF1-205ENST00000582730 CDCA8Q53HL2 280 aa18.32■□□□□ 0.52
SRSF1-205ENST00000582730 EIF3AQ14152 1382 aaKnown RBP18.31■□□□□ 0.52
SRSF1-205ENST00000582730 CYB5RLQ6IPT4 315 aa18.31■□□□□ 0.52
SRSF1-205ENST00000582730 CFAP65Q6ZU64 1925 aaKnown RBP18.31■□□□□ 0.52
SRSF1-205ENST00000582730 PPRC1Q5VV67 1664 aaKnown RBP18.3■□□□□ 0.52
SRSF1-205ENST00000582730 ERICH6BQ5W0A0 696 aa18.3■□□□□ 0.52
SRSF1-205ENST00000582730 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
SRSF1-205ENST00000582730 IQGAP1P46940 1657 aa18.29■□□□□ 0.52
SRSF1-205ENST00000582730 ERICH6Q7L0X2 663 aa18.29■□□□□ 0.52
SRSF1-205ENST00000582730 HECW2Q9P2P5 1572 aa18.28■□□□□ 0.52
SRSF1-205ENST00000582730 KIF1BO60333 1816 aa18.27■□□□□ 0.52
SRSF1-205ENST00000582730 MLH3Q9UHC1 1453 aa18.27■□□□□ 0.51
SRSF1-205ENST00000582730 NOS1P29475 1434 aa18.26■□□□□ 0.51
SRSF1-205ENST00000582730 SENP3Q9H4L4 574 aaPredicted RBP18.26■□□□□ 0.51
SRSF1-205ENST00000582730 NPATQ14207 1427 aa18.26■□□□□ 0.51
SRSF1-205ENST00000582730 NUTM2DQ5VT03 806 aaPredicted RBP18.25■□□□□ 0.51
SRSF1-205ENST00000582730 FRMPD1Q5SYB0 1578 aa18.25■□□□□ 0.51
SRSF1-205ENST00000582730 MAP3K4Q9Y6R4 1608 aa18.24■□□□□ 0.51
SRSF1-205ENST00000582730 ABCA6Q8N139 1617 aa18.23■□□□□ 0.51
SRSF1-205ENST00000582730 MROH2AA6NES4 1674 aa18.23■□□□□ 0.51
SRSF1-205ENST00000582730 TRAK1Q9UPV9 953 aa18.23■□□□□ 0.51
SRSF1-205ENST00000582730 MYOM2P54296 1465 aa18.23■□□□□ 0.51
SRSF1-205ENST00000582730 LMTK2Q8IWU2 1503 aa18.22■□□□□ 0.51
SRSF1-205ENST00000582730 NEO1Q92859 1461 aa18.21■□□□□ 0.5
SRSF1-205ENST00000582730 PPP2R1AP30153 589 aa18.21■□□□□ 0.5
SRSF1-205ENST00000582730 AMER1Q5JTC6 1135 aaPredicted RBP18.21■□□□□ 0.5
SRSF1-205ENST00000582730 TMEM132EQ6IEE7 984 aa18.21■□□□□ 0.5
SRSF1-205ENST00000582730 WDR43Q15061 677 aaKnown RBP eCLIP18.2■□□□□ 0.59e-21■□□□□ 9.3
SRSF1-205ENST00000582730 CDCA7LQ96GN5 454 aa18.19■□□□□ 0.5
SRSF1-205ENST00000582730 ADAMTS8Q9UP79 889 aa18.18■□□□□ 0.5
SRSF1-205ENST00000582730 SYNMO15061 1565 aa18.18■□□□□ 0.5
SRSF1-205ENST00000582730 CCDC136Q96JN2 1154 aa18.18■□□□□ 0.5
SRSF1-205ENST00000582730 KIAA1210Q9ULL0 1709 aa18.18■□□□□ 0.5
SRSF1-205ENST00000582730 ABCC3O15438 1527 aa18.17■□□□□ 0.5
SRSF1-205ENST00000582730 CENPJQ9HC77 1338 aaPredicted RBP18.17■□□□□ 0.5
SRSF1-205ENST00000582730 NEURL4Q96JN8 1562 aa18.17■□□□□ 0.5
SRSF1-205ENST00000582730 ADGRB3O60242 1522 aa18.17■□□□□ 0.5
SRSF1-205ENST00000582730 RCAN3Q9UKA8 241 aa18.16■□□□□ 0.5
SRSF1-205ENST00000582730 FAM69CQ0P6D2 419 aa18.16■□□□□ 0.5
SRSF1-205ENST00000582730 ASXL1Q8IXJ9 1541 aa18.15■□□□□ 0.5
SRSF1-205ENST00000582730 KDM5AP29375 1690 aaKnown RBP18.15■□□□□ 0.5
SRSF1-205ENST00000582730 ERVK-7P63135 1459 aa18.15■□□□□ 0.5
SRSF1-205ENST00000582730 SLC24A1O60721 1099 aa18.15■□□□□ 0.5
SRSF1-205ENST00000582730 YEATS2Q9ULM3 1422 aa18.15■□□□□ 0.5
SRSF1-205ENST00000582730 RNF123Q5XPI4 1314 aa18.14■□□□□ 0.49
SRSF1-205ENST00000582730 PDE3BQ13370 1112 aa18.14■□□□□ 0.49
SRSF1-205ENST00000582730 IFT172Q9UG01 1749 aa18.14■□□□□ 0.49
SRSF1-205ENST00000582730 DIP2CQ9Y2E4 1556 aa18.13■□□□□ 0.49
SRSF1-205ENST00000582730 C14orf93Q9H972 538 aaKnown RBP18.13■□□□□ 0.49
SRSF1-205ENST00000582730 RRP1P56182 461 aaKnown RBP18.12■□□□□ 0.49
SRSF1-205ENST00000582730 BLMP54132 1417 aaPredicted RBP18.12■□□□□ 0.49
SRSF1-205ENST00000582730 NRXN1Q9ULB1 1477 aa18.11■□□□□ 0.49
SRSF1-205ENST00000582730 CAMSAP1Q5T5Y3 1602 aa18.11■□□□□ 0.49
SRSF1-205ENST00000582730 MYOM1P52179 1685 aa18.11■□□□□ 0.49
SRSF1-205ENST00000582730 PIK3C2GO75747 1445 aa18.11■□□□□ 0.49
SRSF1-205ENST00000582730 SAFB2Q14151 953 aaKnown RBP eCLIP18.1■□□□□ 0.49
SRSF1-205ENST00000582730 IDI1Q13907 227 aa18.1■□□□□ 0.49
SRSF1-205ENST00000582730 CARD14Q9BXL6 1004 aa18.1■□□□□ 0.49
SRSF1-205ENST00000582730 RPGRIP1LQ68CZ1 1315 aa18.1■□□□□ 0.49
SRSF1-205ENST00000582730 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
SRSF1-205ENST00000582730 CCDC146Q8IYE0 955 aa18.09■□□□□ 0.49
SRSF1-205ENST00000582730 TNNT2P45379 298 aaPredicted RBP18.09■□□□□ 0.49
SRSF1-205ENST00000582730 SLC12A5Q9H2X9 1139 aa18.08■□□□□ 0.48
SRSF1-205ENST00000582730 DEKP35659 375 aaKnown RBP18.07■□□□□ 0.48
SRSF1-205ENST00000582730 STK26Q9P289 416 aa18.07■□□□□ 0.48
SRSF1-205ENST00000582730 PPLO60437 1756 aa18.07■□□□□ 0.48
SRSF1-205ENST00000582730 RICTORQ6R327 1708 aa18.07■□□□□ 0.48
SRSF1-205ENST00000582730 SIGLEC1Q9BZZ2 1709 aa18.07■□□□□ 0.48
SRSF1-205ENST00000582730 EXOC6Q8TAG9 804 aa18.06■□□□□ 0.48
SRSF1-205ENST00000582730 PLIN1O60240 522 aa18.05■□□□□ 0.48
SRSF1-205ENST00000582730 SETBP1Q9Y6X0 1596 aa18.04■□□□□ 0.48
SRSF1-205ENST00000582730 SBNO2Q9Y2G9 1366 aa18.04■□□□□ 0.48
SRSF1-205ENST00000582730 STAG3Q9UJ98 1225 aa18.04■□□□□ 0.48
SRSF1-205ENST00000582730 NPC1L1Q9UHC9 1359 aa18.04■□□□□ 0.48
SRSF1-205ENST00000582730 FBXO31Q5XUX0 539 aaPredicted RBP18.04■□□□□ 0.48
SRSF1-205ENST00000582730 MLECQ14165 292 aa18.03■□□□□ 0.48
SRSF1-205ENST00000582730 NSD3Q9BZ95 1437 aa18.03■□□□□ 0.48
SRSF1-205ENST00000582730 INSRP06213 1382 aa18.03■□□□□ 0.48
SRSF1-205ENST00000582730 MORC1Q86VD1 984 aa18.03■□□□□ 0.48
SRSF1-205ENST00000582730 SLC52A1Q9NWF4 448 aa18.03■□□□□ 0.48
SRSF1-205ENST00000582730 TSPOAP1O95153 1857 aa18.03■□□□□ 0.48
SRSF1-205ENST00000582730 ZMYM4Q5VZL5 1548 aa18.02■□□□□ 0.48
SRSF1-205ENST00000582730 ADGRB1O14514 1584 aa18.02■□□□□ 0.48
SRSF1-205ENST00000582730 PLEKHH1Q9ULM0 1364 aa18.02■□□□□ 0.48
SRSF1-205ENST00000582730 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
SRSF1-205ENST00000582730 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
SRSF1-205ENST00000582730 RIMBP3Q9UFD9 1639 aa18.01■□□□□ 0.47
SRSF1-205ENST00000582730 QRICH2Q9H0J4 1663 aa18.01■□□□□ 0.47
SRSF1-205ENST00000582730 MYO3AQ8NEV4 1616 aa18.01■□□□□ 0.47
SRSF1-205ENST00000582730 EVC2Q86UK5 1308 aa18■□□□□ 0.47
SRSF1-205ENST00000582730 APAF1O14727 1248 aa18■□□□□ 0.47
SRSF1-205ENST00000582730 CABP2Q9NPB3 220 aa18■□□□□ 0.47
SRSF1-205ENST00000582730 ARHGAP31Q2M1Z3 1444 aa17.99■□□□□ 0.47
SRSF1-205ENST00000582730 NEXMIFQ5QGS0 1516 aa17.99■□□□□ 0.47
SRSF1-205ENST00000582730 GOLGA2Q08379 1002 aa17.98■□□□□ 0.47
SRSF1-205ENST00000582730 GLI2P10070 1586 aa17.98■□□□□ 0.47
SRSF1-205ENST00000582730 PIK3C2BO00750 1634 aa17.98■□□□□ 0.47
SRSF1-205ENST00000582730 NOP58Q9Y2X3 529 aaKnown RBP17.98■□□□□ 0.47
SRSF1-205ENST00000582730 SRPK2P78362 688 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms