RNA–Protein interactions for RNA: ENST00000582583.4

CCDC144NL-AS1-216, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene CCDC144NL-AS1, Length 1,670 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-216ENST00000582583 DHX57Q6P158 1386 aaKnown RBP18.08■□□□□ 0.49
CCDC144NL-AS1-216ENST00000582583 POLR1AO95602 1720 aaPredicted RBP18.08■□□□□ 0.49
CCDC144NL-AS1-216ENST00000582583 EID1Q9Y6B2 187 aa18.07■□□□□ 0.48
CCDC144NL-AS1-216ENST00000582583 SCAF11Q99590 1463 aaKnown RBP18.07■□□□□ 0.48
CCDC144NL-AS1-216ENST00000582583 TXNDC2Q86VQ3 553 aa18.06■□□□□ 0.48
CCDC144NL-AS1-216ENST00000582583 LTKP29376 864 aa18.06■□□□□ 0.48
CCDC144NL-AS1-216ENST00000582583 ZNF326Q5BKZ1 582 aaKnown RBP18.06■□□□□ 0.48
CCDC144NL-AS1-216ENST00000582583 RIMS2Q9UQ26 1411 aa18.06■□□□□ 0.48
CCDC144NL-AS1-216ENST00000582583 NEURL4Q96JN8 1562 aa18.05■□□□□ 0.48
CCDC144NL-AS1-216ENST00000582583 ZFYVE9O95405 1425 aa18.05■□□□□ 0.48
CCDC144NL-AS1-216ENST00000582583 DMRT2Q9Y5R5 561 aa18.05■□□□□ 0.48
CCDC144NL-AS1-216ENST00000582583 HDGFP51858 240 aaKnown RBP18.03■□□□□ 0.48
CCDC144NL-AS1-216ENST00000582583 MED14O60244 1454 aa18.03■□□□□ 0.48
CCDC144NL-AS1-216ENST00000582583 NPHP4O75161 1426 aaPredicted RBP18.02■□□□□ 0.48
CCDC144NL-AS1-216ENST00000582583 SPATA31E1Q6ZUB1 1445 aa18.02■□□□□ 0.48
CCDC144NL-AS1-216ENST00000582583 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.02■□□□□ 0.47
CCDC144NL-AS1-216ENST00000582583 PPP1R15AO75807 674 aaPredicted RBP18.01■□□□□ 0.47
CCDC144NL-AS1-216ENST00000582583 IQGAP1P46940 1657 aa18■□□□□ 0.47
CCDC144NL-AS1-216ENST00000582583 RGL3Q3MIN7 710 aa18■□□□□ 0.47
CCDC144NL-AS1-216ENST00000582583 NUTM2DQ5VT03 806 aaPredicted RBP18■□□□□ 0.47
CCDC144NL-AS1-216ENST00000582583 NEXMIFQ5QGS0 1516 aa18■□□□□ 0.47
CCDC144NL-AS1-216ENST00000582583 KCNA4P22459 653 aa17.99■□□□□ 0.47
CCDC144NL-AS1-216ENST00000582583 RPGRIP1LQ68CZ1 1315 aa17.99■□□□□ 0.47
CCDC144NL-AS1-216ENST00000582583 MAPK8IP2Q13387 824 aaPredicted RBP17.99■□□□□ 0.47
CCDC144NL-AS1-216ENST00000582583 PLEKHG1Q9ULL1 1385 aa17.97■□□□□ 0.47
CCDC144NL-AS1-216ENST00000582583 PPLO60437 1756 aa17.96■□□□□ 0.47
CCDC144NL-AS1-216ENST00000582583 CCER1Q8TC90 406 aaPredicted RBP17.95■□□□□ 0.46
CCDC144NL-AS1-216ENST00000582583 BCANQ96GW7 911 aa17.95■□□□□ 0.46
CCDC144NL-AS1-216ENST00000582583 VGFO15240 615 aaPredicted RBP17.94■□□□□ 0.46
CCDC144NL-AS1-216ENST00000582583 SIN3AQ96ST3 1273 aa17.93■□□□□ 0.46
CCDC144NL-AS1-216ENST00000582583 IFT172Q9UG01 1749 aa17.93■□□□□ 0.46
CCDC144NL-AS1-216ENST00000582583 NCBP3Q53F19 620 aaKnown RBP17.92■□□□□ 0.46
CCDC144NL-AS1-216ENST00000582583 SLC26A8Q96RN1 970 aa17.91■□□□□ 0.46
CCDC144NL-AS1-216ENST00000582583 NEUROD1Q13562 356 aa17.9■□□□□ 0.46
CCDC144NL-AS1-216ENST00000582583 SETBP1Q9Y6X0 1596 aa17.89■□□□□ 0.46
CCDC144NL-AS1-216ENST00000582583 ADAMTS13Q76LX8 1427 aa17.88■□□□□ 0.45
CCDC144NL-AS1-216ENST00000582583 NRXN3Q9Y4C0 1643 aa17.88■□□□□ 0.45
CCDC144NL-AS1-216ENST00000582583 ADGRF5Q8IZF2 1346 aa17.88■□□□□ 0.45
CCDC144NL-AS1-216ENST00000582583 ZNF335Q9H4Z2 1342 aaPredicted RBP17.88■□□□□ 0.45
CCDC144NL-AS1-216ENST00000582583 MYOM2P54296 1465 aa17.88■□□□□ 0.45
CCDC144NL-AS1-216ENST00000582583 DIP2AQ14689 1571 aa17.88■□□□□ 0.45
CCDC144NL-AS1-216ENST00000582583 DCAF11Q8TEB1 546 aa17.87■□□□□ 0.45
CCDC144NL-AS1-216ENST00000582583 TBX22Q9Y458 520 aa17.87■□□□□ 0.45
CCDC144NL-AS1-216ENST00000582583 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
CCDC144NL-AS1-216ENST00000582583 KDM2AQ9Y2K7 1162 aa17.86■□□□□ 0.45
CCDC144NL-AS1-216ENST00000582583 CLSPNQ9HAW4 1339 aa17.85■□□□□ 0.45
CCDC144NL-AS1-216ENST00000582583 STAC3Q96MF2 364 aa17.84■□□□□ 0.45
CCDC144NL-AS1-216ENST00000582583 NRXN1Q9ULB1 1477 aa17.84■□□□□ 0.45
CCDC144NL-AS1-216ENST00000582583 PIK3C2GO75747 1445 aa17.84■□□□□ 0.45
CCDC144NL-AS1-216ENST00000582583 LTBP4Q8N2S1 1624 aa17.83■□□□□ 0.44
CCDC144NL-AS1-216ENST00000582583 ALKQ9UM73 1620 aa17.83■□□□□ 0.44
CCDC144NL-AS1-216ENST00000582583 L3MBTL2Q969R5 705 aa17.82■□□□□ 0.44
CCDC144NL-AS1-216ENST00000582583 PIK3R4Q99570 1358 aa17.82■□□□□ 0.44
CCDC144NL-AS1-216ENST00000582583 SETD1AO15047 1707 aaKnown RBP17.81■□□□□ 0.44
CCDC144NL-AS1-216ENST00000582583 KCNA6P17658 529 aa17.8■□□□□ 0.44
CCDC144NL-AS1-216ENST00000582583 STRCP1A6NGW2 1772 aa17.8■□□□□ 0.44
CCDC144NL-AS1-216ENST00000582583 TONSLQ96HA7 1378 aa17.8■□□□□ 0.44
CCDC144NL-AS1-216ENST00000582583 METP08581 1390 aa17.79■□□□□ 0.44
CCDC144NL-AS1-216ENST00000582583 CPS1P31327 1500 aa17.79■□□□□ 0.44
CCDC144NL-AS1-216ENST00000582583 NWD1Q149M9 1564 aa17.79■□□□□ 0.44
CCDC144NL-AS1-216ENST00000582583 CHD2O14647 1828 aaKnown RBP17.79■□□□□ 0.44
CCDC144NL-AS1-216ENST00000582583 PTPRUQ92729 1446 aa17.77■□□□□ 0.44
CCDC144NL-AS1-216ENST00000582583 LAMC1P11047 1609 aa17.77■□□□□ 0.43
CCDC144NL-AS1-216ENST00000582583 CFAP70Q5T0N1 1121 aa17.77■□□□□ 0.43
CCDC144NL-AS1-216ENST00000582583 C14orf93Q9H972 538 aaKnown RBP17.77■□□□□ 0.43
CCDC144NL-AS1-216ENST00000582583 NKTRP30414 1462 aaKnown RBP17.75■□□□□ 0.43
CCDC144NL-AS1-216ENST00000582583 AMOTL2Q9Y2J4 779 aa17.75■□□□□ 0.43
CCDC144NL-AS1-216ENST00000582583 PRAG1Q86YV5 1406 aa17.75■□□□□ 0.43
CCDC144NL-AS1-216ENST00000582583 ASXL1Q8IXJ9 1541 aa17.74■□□□□ 0.43
CCDC144NL-AS1-216ENST00000582583 CERKQ8TCT0 537 aa17.74■□□□□ 0.43
CCDC144NL-AS1-216ENST00000582583 XRN1Q8IZH2 1706 aaKnown RBP17.73■□□□□ 0.43
CCDC144NL-AS1-216ENST00000582583 LRRC7Q96NW7 1537 aa17.73■□□□□ 0.43
CCDC144NL-AS1-216ENST00000582583 TMEM132EQ6IEE7 984 aa17.73■□□□□ 0.43
CCDC144NL-AS1-216ENST00000582583 PROSER2Q86WR7 435 aaPredicted RBP17.71■□□□□ 0.43
CCDC144NL-AS1-216ENST00000582583 LRPPRCP42704 1394 aaKnown RBP17.7■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 KIAA1210Q9ULL0 1709 aa17.69■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 ADGRB1O14514 1584 aa17.69■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 TMEM94Q12767 1356 aa17.69■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 YTHDC2Q9H6S0 1430 aaKnown RBP17.69■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 IQSEC2Q5JU85 1478 aa17.69■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 RBM33Q96EV2 1170 aaKnown RBP17.68■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 STK26Q9P289 416 aa17.68■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 TIMELESSQ9UNS1 1208 aa17.68■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 PTCH1Q13635 1447 aa17.67■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 ABCC11Q96J66 1382 aa17.67■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 XIRP1Q702N8 1843 aaKnown RBP17.67■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 KNDC1Q76NI1 1749 aa17.66■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 TECPR2O15040 1411 aa17.66■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 ROBO2Q9HCK4 1378 aa17.66■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 NBPF8Q3BBV2 869 aa17.66■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 TRPM1Q7Z4N2 1603 aa17.65■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 NBPF1Q3BBV0 1214 aa17.65■□□□□ 0.42
CCDC144NL-AS1-216ENST00000582583 NCOA3Q9Y6Q9 1424 aa17.64■□□□□ 0.41
CCDC144NL-AS1-216ENST00000582583 NPM3O75607 178 aaKnown RBP17.64■□□□□ 0.41
CCDC144NL-AS1-216ENST00000582583 C14orf37Q86TY3 774 aa17.63■□□□□ 0.41
CCDC144NL-AS1-216ENST00000582583 TRAK1Q9UPV9 953 aa17.62■□□□□ 0.41
CCDC144NL-AS1-216ENST00000582583 ROCK2O75116 1388 aaKnown RBP17.62■□□□□ 0.41
CCDC144NL-AS1-216ENST00000582583 MSH6P52701 1360 aa17.61■□□□□ 0.41
CCDC144NL-AS1-216ENST00000582583 DLC1Q96QB1 1528 aa17.61■□□□□ 0.41
CCDC144NL-AS1-216ENST00000582583 SIRT1Q96EB6 747 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms