RNA–Protein interactions for RNA: ENST00000582583.4

CCDC144NL-AS1-216, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene CCDC144NL-AS1, Length 1,670 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-216ENST00000582583 NISCHQ9Y2I1 1504 aa29.55■■■□□ 2.32
CCDC144NL-AS1-216ENST00000582583 CCDC180Q9P1Z9 1646 aa26.18■■□□□ 1.78
CCDC144NL-AS1-216ENST00000582583 AEBP2Q6ZN18 517 aaPredicted RBP26.17■■□□□ 1.78
CCDC144NL-AS1-216ENST00000582583 CHIC1Q5VXU3 224 aa25.64■■□□□ 1.69
CCDC144NL-AS1-216ENST00000582583 ABCC9O60706 1549 aa25.42■■□□□ 1.66
CCDC144NL-AS1-216ENST00000582583 ZCCHC6Q5VYS8 1495 aaKnown RBP24.67■■□□□ 1.54
CCDC144NL-AS1-216ENST00000582583 DCAF8L2P0C7V8 631 aa24.62■■□□□ 1.53
CCDC144NL-AS1-216ENST00000582583 NACADO15069 1562 aa24.56■■□□□ 1.52
CCDC144NL-AS1-216ENST00000582583 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
CCDC144NL-AS1-216ENST00000582583 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
CCDC144NL-AS1-216ENST00000582583 DCAF1Q9Y4B6 1507 aa24.46■■□□□ 1.51
CCDC144NL-AS1-216ENST00000582583 UNC13AQ9UPW8 1703 aa23.98■■□□□ 1.43
CCDC144NL-AS1-216ENST00000582583 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
CCDC144NL-AS1-216ENST00000582583 PABPN1Q86U42 306 aaKnown RBP eCLIP23.79■■□□□ 1.4
CCDC144NL-AS1-216ENST00000582583 BICRAQ9NZM4 1560 aa23.79■■□□□ 1.4
CCDC144NL-AS1-216ENST00000582583 SHROOM4Q9ULL8 1493 aa23.55■■□□□ 1.36
CCDC144NL-AS1-216ENST00000582583 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.3
CCDC144NL-AS1-216ENST00000582583 DNAJC5BQ9UF47 199 aa23.11■■□□□ 1.29
CCDC144NL-AS1-216ENST00000582583 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
CCDC144NL-AS1-216ENST00000582583 CC2D2AQ9P2K1 1620 aa23■■□□□ 1.27
CCDC144NL-AS1-216ENST00000582583 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
CCDC144NL-AS1-216ENST00000582583 SMARCA4P51532 1647 aa22.89■■□□□ 1.26
CCDC144NL-AS1-216ENST00000582583 MROH2BQ7Z745 1585 aa22.79■■□□□ 1.24
CCDC144NL-AS1-216ENST00000582583 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
CCDC144NL-AS1-216ENST00000582583 SMARCA2P51531 1590 aa22.69■■□□□ 1.22
CCDC144NL-AS1-216ENST00000582583 PEG3Q9GZU2 1588 aa22.66■■□□□ 1.22
CCDC144NL-AS1-216ENST00000582583 NCAPD3P42695 1498 aa22.65■■□□□ 1.22
CCDC144NL-AS1-216ENST00000582583 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
CCDC144NL-AS1-216ENST00000582583 HMGXB3Q12766 1538 aa22.57■■□□□ 1.2
CCDC144NL-AS1-216ENST00000582583 WIZO95785 1651 aa22.56■■□□□ 1.2
CCDC144NL-AS1-216ENST00000582583 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
CCDC144NL-AS1-216ENST00000582583 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
CCDC144NL-AS1-216ENST00000582583 TOP2AP11388 1531 aaKnown RBP22.33■■□□□ 1.16
CCDC144NL-AS1-216ENST00000582583 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
CCDC144NL-AS1-216ENST00000582583 SUPT5HO00267 1087 aaKnown RBP22.22■■□□□ 1.15
CCDC144NL-AS1-216ENST00000582583 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
CCDC144NL-AS1-216ENST00000582583 NESP48681 1621 aa22.06■■□□□ 1.12
CCDC144NL-AS1-216ENST00000582583 LAMC3Q9Y6N6 1575 aa22.04■■□□□ 1.12
CCDC144NL-AS1-216ENST00000582583 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.11
CCDC144NL-AS1-216ENST00000582583 CFTRP13569 1480 aa21.93■■□□□ 1.1
CCDC144NL-AS1-216ENST00000582583 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
CCDC144NL-AS1-216ENST00000582583 PDS5BQ9NTI5 1447 aa21.88■■□□□ 1.09
CCDC144NL-AS1-216ENST00000582583 KIF21AQ7Z4S6 1674 aa21.8■■□□□ 1.08
CCDC144NL-AS1-216ENST00000582583 PRDM2Q13029 1718 aa21.78■■□□□ 1.08
CCDC144NL-AS1-216ENST00000582583 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.07
CCDC144NL-AS1-216ENST00000582583 CEP164Q9UPV0 1460 aa21.73■■□□□ 1.07
CCDC144NL-AS1-216ENST00000582583 THOC2Q8NI27 1593 aaKnown RBP21.67■■□□□ 1.06
CCDC144NL-AS1-216ENST00000582583 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.05
CCDC144NL-AS1-216ENST00000582583 CUX2O14529 1486 aa21.58■■□□□ 1.04
CCDC144NL-AS1-216ENST00000582583 WDR62O43379 1518 aa21.56■■□□□ 1.04
CCDC144NL-AS1-216ENST00000582583 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
CCDC144NL-AS1-216ENST00000582583 ABCC8Q09428 1581 aa21.45■■□□□ 1.02
CCDC144NL-AS1-216ENST00000582583 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
CCDC144NL-AS1-216ENST00000582583 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
CCDC144NL-AS1-216ENST00000582583 CUX1P39880 1505 aa21.36■■□□□ 1.01
CCDC144NL-AS1-216ENST00000582583 WRNQ14191 1432 aaPredicted RBP eCLIP21.32■■□□□ 1
CCDC144NL-AS1-216ENST00000582583 POLA1P09884 1462 aaPredicted RBP21.28■■□□□ 1
CCDC144NL-AS1-216ENST00000582583 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
CCDC144NL-AS1-216ENST00000582583 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
CCDC144NL-AS1-216ENST00000582583 SYNJ1O43426 1573 aa21.25■□□□□ 0.99
CCDC144NL-AS1-216ENST00000582583 TOP2BQ02880 1626 aa21.24■□□□□ 0.99
CCDC144NL-AS1-216ENST00000582583 BIVM-ERCC5R4GMW8 1640 aa21.23■□□□□ 0.99
CCDC144NL-AS1-216ENST00000582583 SOGA1O94964 1423 aa21.19■□□□□ 0.98
CCDC144NL-AS1-216ENST00000582583 RAD54L2Q9Y4B4 1467 aa21.19■□□□□ 0.98
CCDC144NL-AS1-216ENST00000582583 TARBP1Q13395 1621 aaKnown RBP21.18■□□□□ 0.98
CCDC144NL-AS1-216ENST00000582583 ZNF608Q9ULD9 1512 aaPredicted RBP21.14■□□□□ 0.97
CCDC144NL-AS1-216ENST00000582583 EIF4G3O43432 1585 aaKnown RBP21.07■□□□□ 0.96
CCDC144NL-AS1-216ENST00000582583 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
CCDC144NL-AS1-216ENST00000582583 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
CCDC144NL-AS1-216ENST00000582583 AQRO60306 1485 aaKnown RBP eCLIP21.05■□□□□ 0.96
CCDC144NL-AS1-216ENST00000582583 TDRD9Q8NDG6 1382 aaKnown RBP21.05■□□□□ 0.96
CCDC144NL-AS1-216ENST00000582583 TRIM41Q8WV44 630 aa20.97■□□□□ 0.95
CCDC144NL-AS1-216ENST00000582583 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
CCDC144NL-AS1-216ENST00000582583 GAPVD1Q14C86 1478 aa20.96■□□□□ 0.95
CCDC144NL-AS1-216ENST00000582583 GRIN2BQ13224 1484 aa20.92■□□□□ 0.94
CCDC144NL-AS1-216ENST00000582583 PBRM1Q86U86 1689 aa20.9■□□□□ 0.94
CCDC144NL-AS1-216ENST00000582583 SNAPC4Q5SXM2 1469 aa20.87■□□□□ 0.93
CCDC144NL-AS1-216ENST00000582583 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
CCDC144NL-AS1-216ENST00000582583 KIF27Q86VH2 1401 aa20.85■□□□□ 0.93
CCDC144NL-AS1-216ENST00000582583 MAGI1Q96QZ7 1491 aaPredicted RBP20.84■□□□□ 0.93
CCDC144NL-AS1-216ENST00000582583 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
CCDC144NL-AS1-216ENST00000582583 FBLN2P98095 1184 aa20.77■□□□□ 0.92
CCDC144NL-AS1-216ENST00000582583 CHD1O14646 1710 aa20.76■□□□□ 0.91
CCDC144NL-AS1-216ENST00000582583 SYNJ2O15056 1496 aa20.76■□□□□ 0.91
CCDC144NL-AS1-216ENST00000582583 ADAMTS12P58397 1594 aa20.75■□□□□ 0.91
CCDC144NL-AS1-216ENST00000582583 CHMP7Q8WUX9 453 aaPredicted RBP20.74■□□□□ 0.91
CCDC144NL-AS1-216ENST00000582583 IGF1RP08069 1367 aa20.73■□□□□ 0.91
CCDC144NL-AS1-216ENST00000582583 RUSC2Q8N2Y8 1516 aa20.73■□□□□ 0.91
CCDC144NL-AS1-216ENST00000582583 OSCARQ8IYS5 282 aa20.72■□□□□ 0.91
CCDC144NL-AS1-216ENST00000582583 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
CCDC144NL-AS1-216ENST00000582583 CUL7Q14999 1698 aa20.67■□□□□ 0.9
CCDC144NL-AS1-216ENST00000582583 GRIN2AQ12879 1464 aa20.65■□□□□ 0.9
CCDC144NL-AS1-216ENST00000582583 DNAJC5Q9H3Z4 198 aa20.64■□□□□ 0.9
CCDC144NL-AS1-216ENST00000582583 CARMIL1Q5VZK9 1371 aa20.62■□□□□ 0.89
CCDC144NL-AS1-216ENST00000582583 EEA1Q15075 1411 aa20.6■□□□□ 0.89
CCDC144NL-AS1-216ENST00000582583 FOXD1Q16676 465 aa20.6■□□□□ 0.89
CCDC144NL-AS1-216ENST00000582583 NUP160Q12769 1436 aa20.55■□□□□ 0.88
CCDC144NL-AS1-216ENST00000582583 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
CCDC144NL-AS1-216ENST00000582583 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
CCDC144NL-AS1-216ENST00000582583 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms