RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 CERKQ8TCT0 537 aa30.6■■■□□ 2.49
PPP4R1-221ENST00000582240 BCANQ96GW7 911 aa30.6■■■□□ 2.49
PPP4R1-221ENST00000582240 ZFYVE9O95405 1425 aa30.59■■■□□ 2.49
PPP4R1-221ENST00000582240 PPP1R15AO75807 674 aaPredicted RBP30.59■■■□□ 2.49
PPP4R1-221ENST00000582240 TRIM26Q12899 539 aaPredicted RBP30.58■■■□□ 2.49
PPP4R1-221ENST00000582240 IQGAP1P46940 1657 aa30.58■■■□□ 2.49
PPP4R1-221ENST00000582240 SLC26A8Q96RN1 970 aa30.57■■■□□ 2.48
PPP4R1-221ENST00000582240 LTBP4Q8N2S1 1624 aa30.55■■■□□ 2.48
PPP4R1-221ENST00000582240 HDGFP51858 240 aaKnown RBP30.54■■■□□ 2.48
PPP4R1-221ENST00000582240 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.53■■■□□ 2.48
PPP4R1-221ENST00000582240 CCDC144AA2RUR9 1427 aa30.48■■■□□ 2.47
PPP4R1-221ENST00000582240 RGL3Q3MIN7 710 aa30.48■■■□□ 2.47
PPP4R1-221ENST00000582240 PLEKHG1Q9ULL1 1385 aa30.47■■■□□ 2.47
PPP4R1-221ENST00000582240 KIF1BO60333 1816 aa30.45■■■□□ 2.46
PPP4R1-221ENST00000582240 ANKRD30BQ9BXX2 1392 aa30.41■■■□□ 2.46
PPP4R1-221ENST00000582240 ILDR1Q86SU0 546 aaPredicted RBP30.41■■■□□ 2.46
PPP4R1-221ENST00000582240 NEXMIFQ5QGS0 1516 aa30.39■■■□□ 2.46
PPP4R1-221ENST00000582240 STRCP1A6NGW2 1772 aa30.37■■■□□ 2.45
PPP4R1-221ENST00000582240 SPATA31E1Q6ZUB1 1445 aa30.37■■■□□ 2.45
PPP4R1-221ENST00000582240 ADAMTS13Q76LX8 1427 aa30.37■■■□□ 2.45
PPP4R1-221ENST00000582240 TBX22Q9Y458 520 aa30.36■■■□□ 2.45
PPP4R1-221ENST00000582240 FBXO41Q8TF61 875 aa30.35■■■□□ 2.45
PPP4R1-221ENST00000582240 RPGRIP1LQ68CZ1 1315 aa30.34■■■□□ 2.45
PPP4R1-221ENST00000582240 KCNA6P17658 529 aa30.34■■■□□ 2.45
PPP4R1-221ENST00000582240 CPS1P31327 1500 aa30.32■■■□□ 2.44
PPP4R1-221ENST00000582240 VGFO15240 615 aaPredicted RBP30.32■■■□□ 2.44
PPP4R1-221ENST00000582240 RBM33Q96EV2 1170 aaKnown RBP30.32■■■□□ 2.44
PPP4R1-221ENST00000582240 ADGRF5Q8IZF2 1346 aa30.29■■■□□ 2.44
PPP4R1-221ENST00000582240 LRRC7Q96NW7 1537 aa30.28■■■□□ 2.44
PPP4R1-221ENST00000582240 NRXN3Q9Y4C0 1643 aa30.26■■■□□ 2.44
PPP4R1-221ENST00000582240 PROSER2Q86WR7 435 aaPredicted RBP30.26■■■□□ 2.43
PPP4R1-221ENST00000582240 PPLO60437 1756 aa30.23■■■□□ 2.43
PPP4R1-221ENST00000582240 UBAP1LF5GYI3 381 aa30.23■■■□□ 2.43
PPP4R1-221ENST00000582240 PCGF6Q9BYE7 350 aa30.23■■■□□ 2.43
PPP4R1-221ENST00000582240 METP08581 1390 aa30.23■■■□□ 2.43
PPP4R1-221ENST00000582240 SETBP1Q9Y6X0 1596 aa30.23■■■□□ 2.43
PPP4R1-221ENST00000582240 PTPRUQ92729 1446 aa30.22■■■□□ 2.43
PPP4R1-221ENST00000582240 IQSEC2Q5JU85 1478 aa30.21■■■□□ 2.43
PPP4R1-221ENST00000582240 AMOTL2Q9Y2J4 779 aa30.21■■■□□ 2.43
PPP4R1-221ENST00000582240 DIP2AQ14689 1571 aa30.2■■■□□ 2.42
PPP4R1-221ENST00000582240 TMEM94Q12767 1356 aa30.19■■■□□ 2.42
PPP4R1-221ENST00000582240 DHX57Q6P158 1386 aaKnown RBP30.19■■■□□ 2.42
PPP4R1-221ENST00000582240 KDM2AQ9Y2K7 1162 aa30.19■■■□□ 2.42
PPP4R1-221ENST00000582240 SIN3AQ96ST3 1273 aa30.18■■■□□ 2.42
PPP4R1-221ENST00000582240 NWD1Q149M9 1564 aa30.17■■■□□ 2.42
PPP4R1-221ENST00000582240 CHD2O14647 1828 aaKnown RBP30.17■■■□□ 2.42
PPP4R1-221ENST00000582240 PIK3R4Q99570 1358 aa30.15■■■□□ 2.42
PPP4R1-221ENST00000582240 DCAF11Q8TEB1 546 aa30.14■■■□□ 2.42
PPP4R1-221ENST00000582240 ALKQ9UM73 1620 aa30.14■■■□□ 2.41
PPP4R1-221ENST00000582240 IFT172Q9UG01 1749 aa30.13■■■□□ 2.41
PPP4R1-221ENST00000582240 PIP4K2BP78356 416 aa30.12■■■□□ 2.41
PPP4R1-221ENST00000582240 NEUROD1Q13562 356 aa30.11■■■□□ 2.41
PPP4R1-221ENST00000582240 NKTRP30414 1462 aaKnown RBP30.11■■■□□ 2.41
PPP4R1-221ENST00000582240 SCAF1Q9H7N4 1312 aaKnown RBP30.1■■■□□ 2.41
PPP4R1-221ENST00000582240 TMEM132EQ6IEE7 984 aa30.09■■■□□ 2.41
PPP4R1-221ENST00000582240 XIRP1Q702N8 1843 aaKnown RBP30.09■■■□□ 2.41
PPP4R1-221ENST00000582240 TOM1O60784 492 aa30.08■■■□□ 2.41
PPP4R1-221ENST00000582240 CFAP70Q5T0N1 1121 aa30.08■■■□□ 2.41
PPP4R1-221ENST00000582240 PIK3C2GO75747 1445 aa30.06■■■□□ 2.4
PPP4R1-221ENST00000582240 C14orf37Q86TY3 774 aa30.06■■■□□ 2.4
PPP4R1-221ENST00000582240 STK26Q9P289 416 aa30.06■■■□□ 2.4
PPP4R1-221ENST00000582240 SETD1AO15047 1707 aaKnown RBP30.05■■■□□ 2.4
PPP4R1-221ENST00000582240 MYOM2P54296 1465 aa30.04■■■□□ 2.4
PPP4R1-221ENST00000582240 C14orf93Q9H972 538 aaKnown RBP30.03■■■□□ 2.4
PPP4R1-221ENST00000582240 NRXN1Q9ULB1 1477 aa30.02■■■□□ 2.4
PPP4R1-221ENST00000582240 XRN1Q8IZH2 1706 aaKnown RBP30.02■■■□□ 2.4
PPP4R1-221ENST00000582240 ASXL1Q8IXJ9 1541 aa29.98■■■□□ 2.39
PPP4R1-221ENST00000582240 MSH6P52701 1360 aa29.98■■■□□ 2.39
PPP4R1-221ENST00000582240 ROBO2Q9HCK4 1378 aa29.98■■■□□ 2.39
PPP4R1-221ENST00000582240 L3MBTL2Q969R5 705 aa29.97■■■□□ 2.39
PPP4R1-221ENST00000582240 LRPPRCP42704 1394 aaKnown RBP29.92■■■□□ 2.38
PPP4R1-221ENST00000582240 WAPLQ7Z5K2 1190 aa29.92■■■□□ 2.38
PPP4R1-221ENST00000582240 C19orf44Q9H6X5 657 aa29.92■■■□□ 2.38
PPP4R1-221ENST00000582240 NCOA3Q9Y6Q9 1424 aa29.91■■■□□ 2.38
PPP4R1-221ENST00000582240 YTHDC2Q9H6S0 1430 aaKnown RBP29.9■■■□□ 2.38
PPP4R1-221ENST00000582240 STAC3Q96MF2 364 aa29.9■■■□□ 2.38
PPP4R1-221ENST00000582240 ATF3P18847 181 aa29.88■■■□□ 2.37
PPP4R1-221ENST00000582240 PTCH1Q13635 1447 aa29.88■■■□□ 2.37
PPP4R1-221ENST00000582240 HSPA1LP34931 641 aa29.87■■■□□ 2.37
PPP4R1-221ENST00000582240 SLAIN2Q9P270 581 aa29.87■■■□□ 2.37
PPP4R1-221ENST00000582240 ABCC11Q96J66 1382 aa29.87■■■□□ 2.37
PPP4R1-221ENST00000582240 PLEKHH1Q9ULM0 1364 aa29.87■■■□□ 2.37
PPP4R1-221ENST00000582240 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.85■■■□□ 2.37
PPP4R1-221ENST00000582240 CADPS2Q86UW7 1296 aa29.83■■■□□ 2.37
PPP4R1-221ENST00000582240 TRAK1Q9UPV9 953 aa29.83■■■□□ 2.37
PPP4R1-221ENST00000582240 PRAG1Q86YV5 1406 aa29.82■■■□□ 2.36
PPP4R1-221ENST00000582240 ADGRL3Q9HAR2 1447 aa29.82■■■□□ 2.36
PPP4R1-221ENST00000582240 SAFB2Q14151 953 aaKnown RBP eCLIP29.82■■■□□ 2.36
PPP4R1-221ENST00000582240 NBPF1Q3BBV0 1214 aa29.82■■■□□ 2.36
PPP4R1-221ENST00000582240 TECPR2O15040 1411 aa29.81■■■□□ 2.36
PPP4R1-221ENST00000582240 LAMC1P11047 1609 aa29.81■■■□□ 2.36
PPP4R1-221ENST00000582240 ADGRB1O14514 1584 aa29.81■■■□□ 2.36
PPP4R1-221ENST00000582240 PRAM1Q96QH2 718 aa29.78■■■□□ 2.36
PPP4R1-221ENST00000582240 NALCNQ8IZF0 1738 aa29.78■■■□□ 2.36
PPP4R1-221ENST00000582240 FAM135BQ49AJ0 1406 aa29.77■■■□□ 2.36
PPP4R1-221ENST00000582240 SIRT1Q96EB6 747 aa29.75■■■□□ 2.35
PPP4R1-221ENST00000582240 POGKQ9P215 609 aa29.75■■■□□ 2.35
PPP4R1-221ENST00000582240 TONSLQ96HA7 1378 aa29.75■■■□□ 2.35
PPP4R1-221ENST00000582240 NBPF8Q3BBV2 869 aa29.74■■■□□ 2.35
PPP4R1-221ENST00000582240 KNDC1Q76NI1 1749 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms