RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 KCNK17Q96T54 332 aa12.88□□□□□ -0.35
SRSF1-203ENST00000581497 EFCAB5A4FU69 1503 aa12.88□□□□□ -0.35
SRSF1-203ENST00000581497 NUP153P49790 1475 aaKnown RBP12.87□□□□□ -0.35
SRSF1-203ENST00000581497 PLEKHD1A6NEE1 506 aa12.87□□□□□ -0.35
SRSF1-203ENST00000581497 CHGAP10645 457 aaKnown RBP12.87□□□□□ -0.35
SRSF1-203ENST00000581497 PHLDB1Q86UU1 1377 aa12.86□□□□□ -0.35
SRSF1-203ENST00000581497 OXER1Q8TDS5 423 aa12.84□□□□□ -0.35
SRSF1-203ENST00000581497 UPF1Q92900 1129 aaKnown RBP eCLIP12.83□□□□□ -0.361e-16■□□□□ 9.5
SRSF1-203ENST00000581497 ABCA9Q8IUA7 1624 aa12.83□□□□□ -0.36
SRSF1-203ENST00000581497 ADGRL1O94910 1474 aa12.83□□□□□ -0.36
SRSF1-203ENST00000581497 ARAP3Q8WWN8 1544 aa12.83□□□□□ -0.36
SRSF1-203ENST00000581497 VPS9D1Q9Y2B5 631 aa12.82□□□□□ -0.36
SRSF1-203ENST00000581497 FMN1Q68DA7 1419 aa12.8□□□□□ -0.36
SRSF1-203ENST00000581497 NEO1Q92859 1461 aa12.8□□□□□ -0.36
SRSF1-203ENST00000581497 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
SRSF1-203ENST00000581497 ZNF454Q8N9F8 522 aa12.8□□□□□ -0.36
SRSF1-203ENST00000581497 CRISPLD2Q9H0B8 497 aa12.79□□□□□ -0.36
SRSF1-203ENST00000581497 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
SRSF1-203ENST00000581497 ATP1B4Q9UN42 357 aaPredicted RBP12.79□□□□□ -0.36
SRSF1-203ENST00000581497 ARHGAP35Q9NRY4 1499 aa12.78□□□□□ -0.36
SRSF1-203ENST00000581497 RAPGEF3O95398 923 aa12.77□□□□□ -0.37
SRSF1-203ENST00000581497 PPP1R15BQ5SWA1 713 aa12.77□□□□□ -0.37
SRSF1-203ENST00000581497 BCL2L12Q9HB09 334 aa12.77□□□□□ -0.37
SRSF1-203ENST00000581497 CDK11AQ9UQ88 783 aaPredicted RBP12.76□□□□□ -0.37
SRSF1-203ENST00000581497 SLC4A5Q9BY07 1137 aa12.75□□□□□ -0.37
SRSF1-203ENST00000581497 CDK13Q14004 1512 aaKnown RBP12.74□□□□□ -0.37
SRSF1-203ENST00000581497 PTPN5P54829 565 aa12.74□□□□□ -0.37
SRSF1-203ENST00000581497 FOSBP53539 338 aa12.73□□□□□ -0.37
SRSF1-203ENST00000581497 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.72□□□□□ -0.37
SRSF1-203ENST00000581497 FANCAO15360 1455 aa12.72□□□□□ -0.37
SRSF1-203ENST00000581497 AKNAQ7Z591 1439 aa12.72□□□□□ -0.37
SRSF1-203ENST00000581497 PTPREP23469 700 aa12.72□□□□□ -0.37
SRSF1-203ENST00000581497 HECW1Q76N89 1606 aa12.72□□□□□ -0.37
SRSF1-203ENST00000581497 DENND4BO75064 1496 aaPredicted RBP12.72□□□□□ -0.37
SRSF1-203ENST00000581497 NCKAP5LQ9HCH0 1330 aa12.7□□□□□ -0.38
SRSF1-203ENST00000581497 PLCH2O75038 1416 aa12.7□□□□□ -0.38
SRSF1-203ENST00000581497 BHMG1C9JSJ3 638 aaPredicted RBP12.69□□□□□ -0.38
SRSF1-203ENST00000581497 PDE4AP27815 886 aa12.69□□□□□ -0.38
SRSF1-203ENST00000581497 CFAP74Q9C0B2 1584 aa12.69□□□□□ -0.38
SRSF1-203ENST00000581497 ARID4BQ4LE39 1312 aaPredicted RBP12.68□□□□□ -0.38
SRSF1-203ENST00000581497 EFCAB2Q5VUJ9 269 aa12.68□□□□□ -0.38
SRSF1-203ENST00000581497 ANO8Q9HCE9 1232 aaPredicted RBP12.68□□□□□ -0.38
SRSF1-203ENST00000581497 TTC37Q6PGP7 1564 aa12.68□□□□□ -0.38
SRSF1-203ENST00000581497 THSD4Q6ZMP0 1018 aa12.67□□□□□ -0.38
SRSF1-203ENST00000581497 ZBED2Q9BTP6 218 aa12.67□□□□□ -0.38
SRSF1-203ENST00000581497 CLIP1P30622 1438 aa12.67□□□□□ -0.38
SRSF1-203ENST00000581497 TROQ12816 1431 aaPredicted RBP12.67□□□□□ -0.38
SRSF1-203ENST00000581497 FRMPD1Q5SYB0 1578 aa12.66□□□□□ -0.38
SRSF1-203ENST00000581497 EVI5O60447 810 aa12.66□□□□□ -0.38
SRSF1-203ENST00000581497 CASKIN1Q8WXD9 1431 aa12.65□□□□□ -0.38
SRSF1-203ENST00000581497 SCAPERQ9BY12 1400 aa12.65□□□□□ -0.38
SRSF1-203ENST00000581497 GOLGA8CPA6NN73 597 aa12.65□□□□□ -0.38
SRSF1-203ENST00000581497 MRPL50Q8N5N7 158 aaKnown RBP12.64□□□□□ -0.39
SRSF1-203ENST00000581497 WNT2BQ93097 391 aa12.64□□□□□ -0.39
SRSF1-203ENST00000581497 ZDHHC16Q969W1 377 aa12.64□□□□□ -0.39
SRSF1-203ENST00000581497 IFFO2Q5TF58 517 aa12.63□□□□□ -0.39
SRSF1-203ENST00000581497 CCDC18Q5T9S5 1454 aa12.63□□□□□ -0.39
SRSF1-203ENST00000581497 MAGI2Q86UL8 1455 aa12.63□□□□□ -0.39
SRSF1-203ENST00000581497 ARHGEF40Q8TER5 1519 aa12.62□□□□□ -0.39
SRSF1-203ENST00000581497 KIF14Q15058 1648 aa12.62□□□□□ -0.39
SRSF1-203ENST00000581497 ADAM33Q9BZ11 813 aa12.62□□□□□ -0.39
SRSF1-203ENST00000581497 ZMYM4Q5VZL5 1548 aa12.62□□□□□ -0.39
SRSF1-203ENST00000581497 POGZQ7Z3K3 1410 aa12.62□□□□□ -0.39
SRSF1-203ENST00000581497 RICTORQ6R327 1708 aa12.61□□□□□ -0.39
SRSF1-203ENST00000581497 PTPRMP28827 1452 aa12.6□□□□□ -0.39
SRSF1-203ENST00000581497 DDX27Q96GQ7 796 aaKnown RBP12.6□□□□□ -0.39
SRSF1-203ENST00000581497 LARP6Q9BRS8 491 aaKnown RBP12.6□□□□□ -0.39
SRSF1-203ENST00000581497 NBPF3Q9H094 633 aa12.6□□□□□ -0.39
SRSF1-203ENST00000581497 ZFYVE16Q7Z3T8 1539 aa12.6□□□□□ -0.39
SRSF1-203ENST00000581497 YEATS2Q9ULM3 1422 aa12.6□□□□□ -0.39
SRSF1-203ENST00000581497 PCF11O94913 1555 aaKnown RBP12.6□□□□□ -0.39
SRSF1-203ENST00000581497 HECW2Q9P2P5 1572 aa12.6□□□□□ -0.39
SRSF1-203ENST00000581497 FYCO1Q9BQS8 1478 aa12.59□□□□□ -0.39
SRSF1-203ENST00000581497 ARHGAP5Q13017 1502 aa12.59□□□□□ -0.39
SRSF1-203ENST00000581497 ADAMTSL3P82987 1691 aa12.59□□□□□ -0.39
SRSF1-203ENST00000581497 RGS20O76081 388 aa12.59□□□□□ -0.39
SRSF1-203ENST00000581497 GTPBP6O43824 516 aaPredicted RBP12.58□□□□□ -0.4
SRSF1-203ENST00000581497 BCORL1Q5H9F3 1711 aa12.57□□□□□ -0.4
SRSF1-203ENST00000581497 MAP3K9P80192 1104 aa12.57□□□□□ -0.4
SRSF1-203ENST00000581497 ZNF518AQ6AHZ1 1483 aa12.57□□□□□ -0.4
SRSF1-203ENST00000581497 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
SRSF1-203ENST00000581497 AFAP1Q8N556 730 aa12.56□□□□□ -0.4
SRSF1-203ENST00000581497 ATP10AO60312 1499 aa12.56□□□□□ -0.4
SRSF1-203ENST00000581497 A0A0G2JS52 829 aa12.55□□□□□ -0.4
SRSF1-203ENST00000581497 MFSD10Q14728 455 aa12.55□□□□□ -0.4
SRSF1-203ENST00000581497 C9orf84Q5VXU9 1444 aa12.54□□□□□ -0.4
SRSF1-203ENST00000581497 MLECQ14165 292 aa12.54□□□□□ -0.4
SRSF1-203ENST00000581497 MADDQ8WXG6 1647 aa12.54□□□□□ -0.4
SRSF1-203ENST00000581497 PPP1R3GB7ZBB8 358 aa12.53□□□□□ -0.4
SRSF1-203ENST00000581497 LRRIQ1Q96JM4 1722 aa12.53□□□□□ -0.4
SRSF1-203ENST00000581497 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
SRSF1-203ENST00000581497 PCDHGA10Q9Y5H3 936 aa12.51□□□□□ -0.41
SRSF1-203ENST00000581497 MTUS2Q5JR59 1369 aa12.51□□□□□ -0.41
SRSF1-203ENST00000581497 KDM5CP41229 1560 aa12.51□□□□□ -0.41
SRSF1-203ENST00000581497 RABGEF1Q9UJ41 708 aa12.5□□□□□ -0.41
SRSF1-203ENST00000581497 ZNF777Q9ULD5 760 aaPredicted RBP12.5□□□□□ -0.41
SRSF1-203ENST00000581497 CEP162Q5TB80 1403 aa12.5□□□□□ -0.41
SRSF1-203ENST00000581497 TRAPPC8Q9Y2L5 1435 aa12.5□□□□□ -0.41
SRSF1-203ENST00000581497 MLH3Q9UHC1 1453 aa12.5□□□□□ -0.41
SRSF1-203ENST00000581497 PREX2Q70Z35 1606 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms