RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 FBXO31Q5XUX0 539 aaPredicted RBP15.25■□□□□ 0.03
CCDC47-203ENST00000580986 CCDC144AA2RUR9 1427 aa15.25■□□□□ 0.03
CCDC47-203ENST00000580986 A2ML1A8K2U0 1454 aa15.24■□□□□ 0.03
CCDC47-203ENST00000580986 CEP170BQ9Y4F5 1589 aaPredicted RBP15.24■□□□□ 0.03
CCDC47-203ENST00000580986 ADGRB3O60242 1522 aa15.23■□□□□ 0.03
CCDC47-203ENST00000580986 UHRF1BP1Q6BDS2 1440 aa15.23■□□□□ 0.03
CCDC47-203ENST00000580986 KIF1BO60333 1816 aa15.22■□□□□ 0.03
CCDC47-203ENST00000580986 MYCNP04198 464 aaPredicted RBP15.22■□□□□ 0.03
CCDC47-203ENST00000580986 TMEM131LA2VDJ0 1609 aa15.21■□□□□ 0.03
CCDC47-203ENST00000580986 UBR1Q8IWV7 1749 aa15.21■□□□□ 0.03
CCDC47-203ENST00000580986 UGGT1Q9NYU2 1555 aa15.21■□□□□ 0.03
CCDC47-203ENST00000580986 IDI1Q13907 227 aa15.19■□□□□ 0.02
CCDC47-203ENST00000580986 SPATA31E1Q6ZUB1 1445 aa15.18■□□□□ 0.02
CCDC47-203ENST00000580986 SLIT1O75093 1534 aa15.17■□□□□ 0.02
CCDC47-203ENST00000580986 LMTK3Q96Q04 1460 aa15.16■□□□□ 0.02
CCDC47-203ENST00000580986 ARHGAP23Q9P227 1491 aa15.15■□□□□ 0.02
CCDC47-203ENST00000580986 CCER1Q8TC90 406 aaPredicted RBP15.14■□□□□ 0.01
CCDC47-203ENST00000580986 MYO5BQ9ULV0 1848 aa15.14■□□□□ 0.01
CCDC47-203ENST00000580986 IFT172Q9UG01 1749 aa15.14■□□□□ 0.01
CCDC47-203ENST00000580986 THEMISQ8N1K5 641 aaPredicted RBP15.13■□□□□ 0.01
CCDC47-203ENST00000580986 STAC3Q96MF2 364 aa15.13■□□□□ 0.01
CCDC47-203ENST00000580986 RBM42Q9BTD8 480 aaKnown RBP15.12■□□□□ 0.01
CCDC47-203ENST00000580986 RPGRIP1LQ68CZ1 1315 aa15.12■□□□□ 0.01
CCDC47-203ENST00000580986 NEXMIFQ5QGS0 1516 aa15.12■□□□□ 0.01
CCDC47-203ENST00000580986 TMEM2Q9UHN6 1383 aa15.11■□□□□ 0.01
CCDC47-203ENST00000580986 ZFYVE9O95405 1425 aa15.11■□□□□ 0.01
CCDC47-203ENST00000580986 POLA2Q14181 598 aa15.11■□□□□ 0.01
CCDC47-203ENST00000580986 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
CCDC47-203ENST00000580986 PPLO60437 1756 aa15.11■□□□□ 0.01
CCDC47-203ENST00000580986 MYOM2P54296 1465 aa15.09■□□□□ 0.01
CCDC47-203ENST00000580986 STAG3Q9UJ98 1225 aa15.09■□□□□ 0.01
CCDC47-203ENST00000580986 POLR1AO95602 1720 aaPredicted RBP15.08■□□□□ 0
CCDC47-203ENST00000580986 HDGFP51858 240 aaKnown RBP15.07■□□□□ 0
CCDC47-203ENST00000580986 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.07■□□□□ 0
CCDC47-203ENST00000580986 RIMS2Q9UQ26 1411 aa15.07■□□□□ 0
CCDC47-203ENST00000580986 MED14O60244 1454 aa15.07■□□□□ 0
CCDC47-203ENST00000580986 SIN3AQ96ST3 1273 aa15.06■□□□□ 0
CCDC47-203ENST00000580986 SCAF11Q99590 1463 aaKnown RBP15.06■□□□□ 0
CCDC47-203ENST00000580986 NRXN1Q9ULB1 1477 aa15.06■□□□□ 0
CCDC47-203ENST00000580986 TONSLQ96HA7 1378 aa15.04■□□□□ -0
CCDC47-203ENST00000580986 CHGAP10645 457 aaKnown RBP15.04■□□□□ -0
CCDC47-203ENST00000580986 SETBP1Q9Y6X0 1596 aa15.03■□□□□ -0
CCDC47-203ENST00000580986 VGFO15240 615 aaPredicted RBP15.03■□□□□ -0
CCDC47-203ENST00000580986 EID1Q9Y6B2 187 aa15.03■□□□□ -0
CCDC47-203ENST00000580986 PLEKHG1Q9ULL1 1385 aa15.02■□□□□ -0
CCDC47-203ENST00000580986 ZNF326Q5BKZ1 582 aaKnown RBP15.02■□□□□ -0
CCDC47-203ENST00000580986 ANKLE2Q86XL3 938 aa15.02■□□□□ -0
CCDC47-203ENST00000580986 LAMC1P11047 1609 aa15.02□□□□□ -0.01
CCDC47-203ENST00000580986 DIP2AQ14689 1571 aa15.02□□□□□ -0.01
CCDC47-203ENST00000580986 PIK3C2GO75747 1445 aa15.01□□□□□ -0.01
CCDC47-203ENST00000580986 STRCQ7RTU9 1775 aa15.01□□□□□ -0.01
CCDC47-203ENST00000580986 NEUROD1Q13562 356 aa15.01□□□□□ -0.01
CCDC47-203ENST00000580986 RGL3Q3MIN7 710 aa15.01□□□□□ -0.01
CCDC47-203ENST00000580986 L3MBTL2Q969R5 705 aa15□□□□□ -0.01
CCDC47-203ENST00000580986 KIAA1210Q9ULL0 1709 aa15□□□□□ -0.01
CCDC47-203ENST00000580986 IQGAP1P46940 1657 aa15□□□□□ -0.01
CCDC47-203ENST00000580986 LTKP29376 864 aa14.99□□□□□ -0.01
CCDC47-203ENST00000580986 NRXN3Q9Y4C0 1643 aa14.99□□□□□ -0.01
CCDC47-203ENST00000580986 TXNDC2Q86VQ3 553 aa14.98□□□□□ -0.01
CCDC47-203ENST00000580986 PRAG1Q86YV5 1406 aa14.98□□□□□ -0.01
CCDC47-203ENST00000580986 DCAF11Q8TEB1 546 aa14.97□□□□□ -0.01
CCDC47-203ENST00000580986 NPHP4O75161 1426 aaPredicted RBP14.97□□□□□ -0.01
CCDC47-203ENST00000580986 SETD1AO15047 1707 aaKnown RBP14.97□□□□□ -0.01
CCDC47-203ENST00000580986 HSPA2P54652 639 aa14.96□□□□□ -0.01
CCDC47-203ENST00000580986 PPP1R15AO75807 674 aaPredicted RBP14.95□□□□□ -0.02
CCDC47-203ENST00000580986 ADGRF5Q8IZF2 1346 aa14.94□□□□□ -0.02
CCDC47-203ENST00000580986 ADAMTS13Q76LX8 1427 aa14.94□□□□□ -0.02
CCDC47-203ENST00000580986 FOXD4L1Q9NU39 408 aa14.94□□□□□ -0.02
CCDC47-203ENST00000580986 TRPM1Q7Z4N2 1603 aa14.94□□□□□ -0.02
CCDC47-203ENST00000580986 ALKQ9UM73 1620 aa14.94□□□□□ -0.02
CCDC47-203ENST00000580986 PIK3R4Q99570 1358 aa14.94□□□□□ -0.02
CCDC47-203ENST00000580986 TBX22Q9Y458 520 aa14.92□□□□□ -0.02
CCDC47-203ENST00000580986 RALGAPBQ86X10 1494 aa14.91□□□□□ -0.02
CCDC47-203ENST00000580986 C14orf93Q9H972 538 aaKnown RBP14.91□□□□□ -0.02
CCDC47-203ENST00000580986 NCKAP5LQ9HCH0 1330 aa14.91□□□□□ -0.02
CCDC47-203ENST00000580986 ADGRB1O14514 1584 aa14.9□□□□□ -0.02
CCDC47-203ENST00000580986 ZEB1P37275 1124 aaPredicted RBP14.9□□□□□ -0.02
CCDC47-203ENST00000580986 GPRASP1Q5JY77 1395 aa14.89□□□□□ -0.03
CCDC47-203ENST00000580986 KDM2AQ9Y2K7 1162 aa14.89□□□□□ -0.03
CCDC47-203ENST00000580986 NWD1Q149M9 1564 aa14.89□□□□□ -0.03
CCDC47-203ENST00000580986 ASXL1Q8IXJ9 1541 aa14.88□□□□□ -0.03
CCDC47-203ENST00000580986 NUTM2DQ5VT03 806 aaPredicted RBP14.88□□□□□ -0.03
CCDC47-203ENST00000580986 KNDC1Q76NI1 1749 aa14.88□□□□□ -0.03
CCDC47-203ENST00000580986 CHD2O14647 1828 aaKnown RBP14.87□□□□□ -0.03
CCDC47-203ENST00000580986 XRN1Q8IZH2 1706 aaKnown RBP14.87□□□□□ -0.03
CCDC47-203ENST00000580986 TECPR2O15040 1411 aa14.86□□□□□ -0.03
CCDC47-203ENST00000580986 CHRDL2Q6WN34 429 aa14.86□□□□□ -0.03
CCDC47-203ENST00000580986 NKTRP30414 1462 aaKnown RBP14.85□□□□□ -0.03
CCDC47-203ENST00000580986 NBPF8Q3BBV2 869 aa14.85□□□□□ -0.03
CCDC47-203ENST00000580986 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
CCDC47-203ENST00000580986 CPS1P31327 1500 aa14.84□□□□□ -0.03
CCDC47-203ENST00000580986 DLC1Q96QB1 1528 aa14.84□□□□□ -0.03
CCDC47-203ENST00000580986 CFAP70Q5T0N1 1121 aa14.84□□□□□ -0.03
CCDC47-203ENST00000580986 METP08581 1390 aa14.84□□□□□ -0.03
CCDC47-203ENST00000580986 PTCH1Q13635 1447 aa14.83□□□□□ -0.03
CCDC47-203ENST00000580986 SLC26A8Q96RN1 970 aa14.83□□□□□ -0.04
CCDC47-203ENST00000580986 ROCK2O75116 1388 aaKnown RBP14.83□□□□□ -0.04
CCDC47-203ENST00000580986 LRPPRCP42704 1394 aaKnown RBP14.83□□□□□ -0.04
CCDC47-203ENST00000580986 ABCC11Q96J66 1382 aa14.83□□□□□ -0.04
CCDC47-203ENST00000580986 YTHDC2Q9H6S0 1430 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms