RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 NPM1P06748 294 aaKnown RBP eCLIP11.42□□□□□ -0.58
SKA2-203ENST00000578105 HIRIP3Q9BW71 556 aaPredicted RBP11.42□□□□□ -0.58
SKA2-203ENST00000578105 ASXL2Q76L83 1435 aa11.42□□□□□ -0.58
SKA2-203ENST00000578105 TRAPPC8Q9Y2L5 1435 aa11.42□□□□□ -0.58
SKA2-203ENST00000578105 KANK1Q14678 1352 aa11.41□□□□□ -0.58
SKA2-203ENST00000578105 GPRASP1Q5JY77 1395 aa11.41□□□□□ -0.58
SKA2-203ENST00000578105 VWDEQ8N2E2 1590 aa11.41□□□□□ -0.58
SKA2-203ENST00000578105 KIF7Q2M1P5 1343 aa11.4□□□□□ -0.58
SKA2-203ENST00000578105 TET3O43151 1660 aa11.4□□□□□ -0.58
SKA2-203ENST00000578105 ADGRL1O94910 1474 aa11.4□□□□□ -0.58
SKA2-203ENST00000578105 TRPM1Q7Z4N2 1603 aa11.4□□□□□ -0.58
SKA2-203ENST00000578105 PAK3O75914 559 aaPredicted RBP11.4□□□□□ -0.58
SKA2-203ENST00000578105 PRAG1Q86YV5 1406 aa11.4□□□□□ -0.58
SKA2-203ENST00000578105 TRPM2O94759 1503 aa11.4□□□□□ -0.59
SKA2-203ENST00000578105 PLA2R1Q13018 1463 aa11.39□□□□□ -0.59
SKA2-203ENST00000578105 ZNF518AQ6AHZ1 1483 aa11.39□□□□□ -0.59
SKA2-203ENST00000578105 PRDM15P57071 1507 aaPredicted RBP11.39□□□□□ -0.59
SKA2-203ENST00000578105 PTPRTO14522 1441 aa11.38□□□□□ -0.59
SKA2-203ENST00000578105 POTEFA5A3E0 1075 aa11.38□□□□□ -0.59
SKA2-203ENST00000578105 CARD11Q9BXL7 1154 aa11.38□□□□□ -0.59
SKA2-203ENST00000578105 DHX29Q7Z478 1369 aaKnown RBP11.38□□□□□ -0.59
SKA2-203ENST00000578105 LMTK2Q8IWU2 1503 aa11.37□□□□□ -0.59
SKA2-203ENST00000578105 PRKRIP1Q9H875 184 aaPredicted RBP11.37□□□□□ -0.59
SKA2-203ENST00000578105 SCAPERQ9BY12 1400 aa11.36□□□□□ -0.59
SKA2-203ENST00000578105 SPHKAPQ2M3C7 1700 aa11.36□□□□□ -0.59
SKA2-203ENST00000578105 BCORL1Q5H9F3 1711 aa11.36□□□□□ -0.59
SKA2-203ENST00000578105 SLC24A1O60721 1099 aa11.36□□□□□ -0.59
SKA2-203ENST00000578105 DCAF11Q8TEB1 546 aa11.36□□□□□ -0.59
SKA2-203ENST00000578105 MS4A3Q96HJ5 214 aa11.36□□□□□ -0.59
SKA2-203ENST00000578105 A2MP01023 1474 aa11.36□□□□□ -0.59
SKA2-203ENST00000578105 CEP152O94986 1710 aa11.35□□□□□ -0.59
SKA2-203ENST00000578105 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
SKA2-203ENST00000578105 NEO1Q92859 1461 aa11.35□□□□□ -0.59
SKA2-203ENST00000578105 MLH3Q9UHC1 1453 aa11.35□□□□□ -0.59
SKA2-203ENST00000578105 E9PCH4 1651 aa11.35□□□□□ -0.59
SKA2-203ENST00000578105 RNF17Q9BXT8 1623 aaKnown RBP11.34□□□□□ -0.59
SKA2-203ENST00000578105 WASHC2CQ9Y4E1 1318 aa11.34□□□□□ -0.59
SKA2-203ENST00000578105 KIAA1210Q9ULL0 1709 aa11.33□□□□□ -0.6
SKA2-203ENST00000578105 C11orf95C9JLR9 678 aaPredicted RBP11.33□□□□□ -0.6
SKA2-203ENST00000578105 CD109Q6YHK3 1445 aa11.32□□□□□ -0.6
SKA2-203ENST00000578105 KIDINS220Q9ULH0 1771 aa11.31□□□□□ -0.6
SKA2-203ENST00000578105 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
SKA2-203ENST00000578105 AFAP1Q8N556 730 aa11.31□□□□□ -0.6
SKA2-203ENST00000578105 POGZQ7Z3K3 1410 aa11.31□□□□□ -0.6
SKA2-203ENST00000578105 NEFLP07196 543 aa11.3□□□□□ -0.6
SKA2-203ENST00000578105 ZNF326Q5BKZ1 582 aaKnown RBP11.3□□□□□ -0.6
SKA2-203ENST00000578105 ERICH6BQ5W0A0 696 aa11.3□□□□□ -0.6
SKA2-203ENST00000578105 MROH1Q8NDA8 1641 aa11.3□□□□□ -0.6
SKA2-203ENST00000578105 EFCAB6Q5THR3 1501 aa11.3□□□□□ -0.6
SKA2-203ENST00000578105 GLI2P10070 1586 aa11.29□□□□□ -0.6
SKA2-203ENST00000578105 HECW2Q9P2P5 1572 aa11.29□□□□□ -0.6
SKA2-203ENST00000578105 MADDQ8WXG6 1647 aa11.29□□□□□ -0.6
SKA2-203ENST00000578105 RALBP1Q15311 655 aa11.29□□□□□ -0.6
SKA2-203ENST00000578105 SUPT16HQ9Y5B9 1047 aaKnown RBP11.29□□□□□ -0.6
SKA2-203ENST00000578105 MYOM2P54296 1465 aa11.29□□□□□ -0.6
SKA2-203ENST00000578105 COL17A1Q9UMD9 1497 aaPredicted RBP11.29□□□□□ -0.6
SKA2-203ENST00000578105 KDM2AQ9Y2K7 1162 aa11.28□□□□□ -0.6
SKA2-203ENST00000578105 INSRP06213 1382 aa11.28□□□□□ -0.6
SKA2-203ENST00000578105 ST20-MTHFSA0A0A6YYL1 179 aa11.27□□□□□ -0.61
SKA2-203ENST00000578105 CDCA8Q53HL2 280 aa11.27□□□□□ -0.61
SKA2-203ENST00000578105 MRS2Q9HD23 443 aa11.27□□□□□ -0.61
SKA2-203ENST00000578105 ZBED9Q6R2W3 1325 aa11.27□□□□□ -0.61
SKA2-203ENST00000578105 CLTCL1P53675 1640 aa11.27□□□□□ -0.61
SKA2-203ENST00000578105 EIF3AQ14152 1382 aaKnown RBP11.27□□□□□ -0.61
SKA2-203ENST00000578105 ZMYM4Q5VZL5 1548 aa11.26□□□□□ -0.61
SKA2-203ENST00000578105 IQGAP1P46940 1657 aa11.26□□□□□ -0.61
SKA2-203ENST00000578105 BRD4O60885 1362 aaPredicted RBP11.26□□□□□ -0.61
SKA2-203ENST00000578105 KIF1BO60333 1816 aa11.25□□□□□ -0.61
SKA2-203ENST00000578105 KIF3BO15066 747 aa11.25□□□□□ -0.61
SKA2-203ENST00000578105 TMF1P82094 1093 aa11.25□□□□□ -0.61
SKA2-203ENST00000578105 HNRNPUQ00839 825 aaKnown RBP eCLIP11.25□□□□□ -0.61
SKA2-203ENST00000578105 SCAF11Q99590 1463 aaKnown RBP11.25□□□□□ -0.61
SKA2-203ENST00000578105 MAP3K4Q9Y6R4 1608 aa11.24□□□□□ -0.61
SKA2-203ENST00000578105 ZC3H13Q5T200 1668 aaKnown RBP11.24□□□□□ -0.61
SKA2-203ENST00000578105 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
SKA2-203ENST00000578105 RGL3Q3MIN7 710 aa11.23□□□□□ -0.61
SKA2-203ENST00000578105 MYBBP1AQ9BQG0 1328 aaKnown RBP11.23□□□□□ -0.61
SKA2-203ENST00000578105 RPGRIP1LQ68CZ1 1315 aa11.22□□□□□ -0.61
SKA2-203ENST00000578105 IFT172Q9UG01 1749 aa11.22□□□□□ -0.61
SKA2-203ENST00000578105 MYT1LQ9UL68 1186 aa11.22□□□□□ -0.61
SKA2-203ENST00000578105 PPRC1Q5VV67 1664 aaKnown RBP11.21□□□□□ -0.61
SKA2-203ENST00000578105 NRXN1Q9ULB1 1477 aa11.21□□□□□ -0.61
SKA2-203ENST00000578105 ARHGAP31Q2M1Z3 1444 aa11.21□□□□□ -0.61
SKA2-203ENST00000578105 TESK2Q96S53 571 aa11.21□□□□□ -0.61
SKA2-203ENST00000578105 FRMPD1Q5SYB0 1578 aa11.2□□□□□ -0.62
SKA2-203ENST00000578105 SETBP1Q9Y6X0 1596 aa11.2□□□□□ -0.62
SKA2-203ENST00000578105 ADGRB3O60242 1522 aa11.2□□□□□ -0.62
SKA2-203ENST00000578105 PARD3Q8TEW0 1356 aa11.2□□□□□ -0.62
SKA2-203ENST00000578105 SBNO2Q9Y2G9 1366 aa11.19□□□□□ -0.62
SKA2-203ENST00000578105 RICTORQ6R327 1708 aa11.19□□□□□ -0.62
SKA2-203ENST00000578105 NBPF1Q3BBV0 1214 aa11.19□□□□□ -0.62
SKA2-203ENST00000578105 ABCA6Q8N139 1617 aa11.19□□□□□ -0.62
SKA2-203ENST00000578105 SYNMO15061 1565 aa11.19□□□□□ -0.62
SKA2-203ENST00000578105 LRPPRCP42704 1394 aaKnown RBP11.18□□□□□ -0.62
SKA2-203ENST00000578105 NPC1L1Q9UHC9 1359 aa11.18□□□□□ -0.62
SKA2-203ENST00000578105 MYO3AQ8NEV4 1616 aa11.18□□□□□ -0.62
SKA2-203ENST00000578105 NLRP13Q86W25 1043 aa11.18□□□□□ -0.62
SKA2-203ENST00000578105 REREQ9P2R6 1566 aa11.18□□□□□ -0.62
SKA2-203ENST00000578105 DIP2CQ9Y2E4 1556 aa11.18□□□□□ -0.62
SKA2-203ENST00000578105 ABCC3O15438 1527 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms