RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 PTPRKQ15262 1439 aa10.74□□□□□ -0.69
CASC3-205ENST00000577605 ADGRL2O95490 1459 aa10.74□□□□□ -0.69
CASC3-205ENST00000577605 IFNLR1Q8IU57 520 aaPredicted RBP10.73□□□□□ -0.69
CASC3-205ENST00000577605 ROCK1Q13464 1354 aa10.73□□□□□ -0.69
CASC3-205ENST00000577605 GALR2O43603 387 aaPredicted RBP10.72□□□□□ -0.69
CASC3-205ENST00000577605 CHIC2Q9UKJ5 165 aa10.72□□□□□ -0.69
CASC3-205ENST00000577605 PREX1Q8TCU6 1659 aa10.72□□□□□ -0.69
CASC3-205ENST00000577605 C3P01024 1663 aa10.71□□□□□ -0.69
CASC3-205ENST00000577605 PZPP20742 1482 aa10.71□□□□□ -0.69
CASC3-205ENST00000577605 HSPA2P54652 639 aa10.71□□□□□ -0.69
CASC3-205ENST00000577605 FAM212AQ96EL1 285 aa10.71□□□□□ -0.69
CASC3-205ENST00000577605 RNF17Q9BXT8 1623 aaKnown RBP10.7□□□□□ -0.7
CASC3-205ENST00000577605 ARHGAP31Q2M1Z3 1444 aa10.7□□□□□ -0.7
CASC3-205ENST00000577605 CROCC2H7BZ55 1655 aa10.69□□□□□ -0.7
CASC3-205ENST00000577605 TNRQ92752 1358 aa10.69□□□□□ -0.7
CASC3-205ENST00000577605 PKD2Q13563 968 aa10.69□□□□□ -0.7
CASC3-205ENST00000577605 CLTCQ00610 1675 aaKnown RBP10.69□□□□□ -0.7
CASC3-205ENST00000577605 SETD1BQ9UPS6 1966 aaKnown RBP10.68□□□□□ -0.7
CASC3-205ENST00000577605 ANKRD50Q9ULJ7 1429 aa10.68□□□□□ -0.7
CASC3-205ENST00000577605 THEMISQ8N1K5 641 aaPredicted RBP10.68□□□□□ -0.7
CASC3-205ENST00000577605 ZC3H13Q5T200 1668 aaKnown RBP10.68□□□□□ -0.7
CASC3-205ENST00000577605 NLRP1Q9C000 1473 aa10.68□□□□□ -0.7
CASC3-205ENST00000577605 PTPRTO14522 1441 aa10.67□□□□□ -0.7
CASC3-205ENST00000577605 RRBP1Q9P2E9 1410 aaKnown RBP10.67□□□□□ -0.7
CASC3-205ENST00000577605 ABCC3O15438 1527 aa10.67□□□□□ -0.7
CASC3-205ENST00000577605 PRDM15P57071 1507 aaPredicted RBP10.67□□□□□ -0.7
CASC3-205ENST00000577605 A2ML1A8K2U0 1454 aa10.67□□□□□ -0.7
CASC3-205ENST00000577605 PLA2R1Q13018 1463 aa10.67□□□□□ -0.7
CASC3-205ENST00000577605 FBXO31Q5XUX0 539 aaPredicted RBP10.66□□□□□ -0.7
CASC3-205ENST00000577605 MS4A3Q96HJ5 214 aa10.66□□□□□ -0.7
CASC3-205ENST00000577605 LMTK2Q8IWU2 1503 aa10.66□□□□□ -0.7
CASC3-205ENST00000577605 ACIN1Q9UKV3 1341 aaKnown RBP10.65□□□□□ -0.7
CASC3-205ENST00000577605 KIF12Q96FN5 646 aa10.65□□□□□ -0.7
CASC3-205ENST00000577605 TPRNQ4KMQ1 711 aa10.64□□□□□ -0.71
CASC3-205ENST00000577605 DCAF8Q5TAQ9 597 aa10.64□□□□□ -0.71
CASC3-205ENST00000577605 PPARGC1BQ86YN6 1023 aaKnown RBP10.64□□□□□ -0.71
CASC3-205ENST00000577605 DEPDC5O75140 1603 aa10.63□□□□□ -0.71
CASC3-205ENST00000577605 MROH1Q8NDA8 1641 aa10.63□□□□□ -0.71
CASC3-205ENST00000577605 POTEIP0CG38 1075 aa10.63□□□□□ -0.71
CASC3-205ENST00000577605 ANKLE2Q86XL3 938 aa10.63□□□□□ -0.71
CASC3-205ENST00000577605 SPOCK2Q92563 424 aa10.63□□□□□ -0.71
CASC3-205ENST00000577605 DCBLD2Q96PD2 775 aa10.63□□□□□ -0.71
CASC3-205ENST00000577605 SLC52A1Q9NWF4 448 aa10.63□□□□□ -0.71
CASC3-205ENST00000577605 SPATA31D1Q6ZQQ2 1576 aa10.63□□□□□ -0.71
CASC3-205ENST00000577605 CEP170BQ9Y4F5 1589 aaPredicted RBP10.63□□□□□ -0.71
CASC3-205ENST00000577605 ERVK-7P63135 1459 aa10.62□□□□□ -0.71
CASC3-205ENST00000577605 MAP3K13O43283 966 aa10.62□□□□□ -0.71
CASC3-205ENST00000577605 ITGAEP38570 1179 aa10.62□□□□□ -0.71
CASC3-205ENST00000577605 MYO3AQ8NEV4 1616 aa10.62□□□□□ -0.71
CASC3-205ENST00000577605 RPRD2Q5VT52 1461 aaKnown RBP10.61□□□□□ -0.71
CASC3-205ENST00000577605 VWDEQ8N2E2 1590 aa10.61□□□□□ -0.71
CASC3-205ENST00000577605 ZNF142P52746 1687 aaPredicted RBP10.61□□□□□ -0.71
CASC3-205ENST00000577605 CAMSAP1Q5T5Y3 1602 aa10.61□□□□□ -0.71
CASC3-205ENST00000577605 HDGFP51858 240 aaKnown RBP10.59□□□□□ -0.71
CASC3-205ENST00000577605 UGGT1Q9NYU2 1555 aa10.59□□□□□ -0.71
CASC3-205ENST00000577605 NCKAP5LQ9HCH0 1330 aa10.58□□□□□ -0.71
CASC3-205ENST00000577605 CERKQ8TCT0 537 aa10.58□□□□□ -0.72
CASC3-205ENST00000577605 FBXO41Q8TF61 875 aa10.58□□□□□ -0.72
CASC3-205ENST00000577605 EID1Q9Y6B2 187 aa10.58□□□□□ -0.72
CASC3-205ENST00000577605 NOS1P29475 1434 aa10.58□□□□□ -0.72
CASC3-205ENST00000577605 NUP155O75694 1391 aa10.57□□□□□ -0.72
CASC3-205ENST00000577605 PYGBP11216 843 aa10.57□□□□□ -0.72
CASC3-205ENST00000577605 GSE1Q14687 1217 aa10.57□□□□□ -0.72
CASC3-205ENST00000577605 EFCAB6Q5THR3 1501 aa10.57□□□□□ -0.72
CASC3-205ENST00000577605 PCDHB13Q9Y5F0 798 aa10.56□□□□□ -0.72
CASC3-205ENST00000577605 HFM1A2PYH4 1435 aa10.56□□□□□ -0.72
CASC3-205ENST00000577605 UNC13BO14795 1591 aa10.56□□□□□ -0.72
CASC3-205ENST00000577605 MED14O60244 1454 aa10.55□□□□□ -0.72
CASC3-205ENST00000577605 STRCQ7RTU9 1775 aa10.55□□□□□ -0.72
CASC3-205ENST00000577605 IDI1Q13907 227 aa10.55□□□□□ -0.72
CASC3-205ENST00000577605 NAIPQ13075 1403 aa10.54□□□□□ -0.72
CASC3-205ENST00000577605 TRPC6Q9Y210 931 aa10.54□□□□□ -0.72
CASC3-205ENST00000577605 IQSEC2Q5JU85 1478 aa10.54□□□□□ -0.72
CASC3-205ENST00000577605 CEP152O94986 1710 aa10.53□□□□□ -0.72
CASC3-205ENST00000577605 NPHP4O75161 1426 aaPredicted RBP10.53□□□□□ -0.72
CASC3-205ENST00000577605 TXNDC2Q86VQ3 553 aa10.53□□□□□ -0.72
CASC3-205ENST00000577605 CIZ1Q9ULV3 898 aaPredicted RBP10.53□□□□□ -0.72
CASC3-205ENST00000577605 TET3O43151 1660 aa10.53□□□□□ -0.72
CASC3-205ENST00000577605 SLIT1O75093 1534 aa10.53□□□□□ -0.72
CASC3-205ENST00000577605 TMEM2Q9UHN6 1383 aa10.52□□□□□ -0.72
CASC3-205ENST00000577605 ILDR1Q86SU0 546 aaPredicted RBP10.52□□□□□ -0.73
CASC3-205ENST00000577605 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.52□□□□□ -0.73
CASC3-205ENST00000577605 SGIP1Q9BQI5 828 aa10.52□□□□□ -0.73
CASC3-205ENST00000577605 ARHGAP23Q9P227 1491 aa10.52□□□□□ -0.73
CASC3-205ENST00000577605 KDM5AP29375 1690 aaKnown RBP10.52□□□□□ -0.73
CASC3-205ENST00000577605 IQGAP3Q86VI3 1631 aa10.51□□□□□ -0.73
CASC3-205ENST00000577605 IFNL1Q8IU54 200 aa10.51□□□□□ -0.73
CASC3-205ENST00000577605 DAXXQ9UER7 740 aaPredicted RBP10.51□□□□□ -0.73
CASC3-205ENST00000577605 SCAF11Q99590 1463 aaKnown RBP10.5□□□□□ -0.73
CASC3-205ENST00000577605 TRIM52Q96A61 297 aa10.5□□□□□ -0.73
CASC3-205ENST00000577605 ATMINO43313 823 aaPredicted RBP10.49□□□□□ -0.73
CASC3-205ENST00000577605 ASTLQ6HA08 431 aaPredicted RBP10.49□□□□□ -0.73
CASC3-205ENST00000577605 KDM2AQ9Y2K7 1162 aa10.49□□□□□ -0.73
CASC3-205ENST00000577605 CPS1P31327 1500 aa10.48□□□□□ -0.73
CASC3-205ENST00000577605 GCC2Q8IWJ2 1684 aa10.48□□□□□ -0.73
CASC3-205ENST00000577605 HRCP23327 699 aa10.48□□□□□ -0.73
CASC3-205ENST00000577605 LTKP29376 864 aa10.48□□□□□ -0.73
CASC3-205ENST00000577605 BMP2KQ9NSY1 1161 aaPredicted RBP10.48□□□□□ -0.73
CASC3-205ENST00000577605 ZNF335Q9H4Z2 1342 aaPredicted RBP10.48□□□□□ -0.73
CASC3-205ENST00000577605 SYNMO15061 1565 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms