RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 KIF12Q96FN5 646 aa14.49□□□□□ -0.09
NPLOC4-219ENST00000576713 CLTCQ00610 1675 aaKnown RBP14.49□□□□□ -0.09
NPLOC4-219ENST00000576713 EIF2AK4Q9P2K8 1649 aaKnown RBP14.48□□□□□ -0.09
NPLOC4-219ENST00000576713 SGIP1Q9BQI5 828 aa14.48□□□□□ -0.09
NPLOC4-219ENST00000576713 ANKRD30AQ9BXX3 1397 aa14.47□□□□□ -0.09
NPLOC4-219ENST00000576713 C3P01024 1663 aa14.47□□□□□ -0.09
NPLOC4-219ENST00000576713 PLCB2Q00722 1185 aa14.47□□□□□ -0.09
NPLOC4-219ENST00000576713 MAP3K13O43283 966 aa14.46□□□□□ -0.09
NPLOC4-219ENST00000576713 PCDHB8Q9UN66 801 aa14.46□□□□□ -0.09
NPLOC4-219ENST00000576713 PCDHB13Q9Y5F0 798 aa14.46□□□□□ -0.09
NPLOC4-219ENST00000576713 ERBINQ96RT1 1412 aa14.46□□□□□ -0.09
NPLOC4-219ENST00000576713 DEPDC5O75140 1603 aa14.45□□□□□ -0.1
NPLOC4-219ENST00000576713 ZNF579Q8NAF0 562 aaKnown RBP14.45□□□□□ -0.1
NPLOC4-219ENST00000576713 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.44□□□□□ -0.1
NPLOC4-219ENST00000576713 ZFP91Q96JP5 570 aaPredicted RBP14.44□□□□□ -0.1
NPLOC4-219ENST00000576713 PHF12Q96QT6 1004 aa14.44□□□□□ -0.1
NPLOC4-219ENST00000576713 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.44□□□□□ -0.1
NPLOC4-219ENST00000576713 ROCK1Q13464 1354 aa14.44□□□□□ -0.1
NPLOC4-219ENST00000576713 LMTK3Q96Q04 1460 aa14.44□□□□□ -0.1
NPLOC4-219ENST00000576713 MROH2AA6NES4 1674 aa14.43□□□□□ -0.1
NPLOC4-219ENST00000576713 PRDM15P57071 1507 aaPredicted RBP14.43□□□□□ -0.1
NPLOC4-219ENST00000576713 ABCC3O15438 1527 aa14.42□□□□□ -0.1
NPLOC4-219ENST00000576713 KDM5DQ9BY66 1539 aa14.42□□□□□ -0.1
NPLOC4-219ENST00000576713 STK25O00506 426 aa14.42□□□□□ -0.1
NPLOC4-219ENST00000576713 ANKRD50Q9ULJ7 1429 aa14.41□□□□□ -0.1
NPLOC4-219ENST00000576713 IFNL1Q8IU54 200 aa14.41□□□□□ -0.1
NPLOC4-219ENST00000576713 ZMYM3Q14202 1370 aa14.41□□□□□ -0.1
NPLOC4-219ENST00000576713 CEP152O94986 1710 aa14.41□□□□□ -0.1
NPLOC4-219ENST00000576713 CNTLNQ9NXG0 1405 aa14.41□□□□□ -0.1
NPLOC4-219ENST00000576713 VWDEQ8N2E2 1590 aa14.4□□□□□ -0.1
NPLOC4-219ENST00000576713 HAX1O00165 279 aa14.4□□□□□ -0.1
NPLOC4-219ENST00000576713 PDAP1Q13442 181 aaKnown RBP14.39□□□□□ -0.11
NPLOC4-219ENST00000576713 NAIPQ13075 1403 aa14.39□□□□□ -0.11
NPLOC4-219ENST00000576713 BCL11BQ9C0K0 894 aaPredicted RBP14.38□□□□□ -0.11
NPLOC4-219ENST00000576713 UNC13BO14795 1591 aa14.38□□□□□ -0.11
NPLOC4-219ENST00000576713 FAM135AQ9P2D6 1515 aa14.37□□□□□ -0.11
NPLOC4-219ENST00000576713 GCC2Q8IWJ2 1684 aa14.37□□□□□ -0.11
NPLOC4-219ENST00000576713 FBXO31Q5XUX0 539 aaPredicted RBP14.37□□□□□ -0.11
NPLOC4-219ENST00000576713 WASHC2CQ9Y4E1 1318 aa14.37□□□□□ -0.11
NPLOC4-219ENST00000576713 CAMSAP1Q5T5Y3 1602 aa14.37□□□□□ -0.11
NPLOC4-219ENST00000576713 ZC3H13Q5T200 1668 aaKnown RBP14.36□□□□□ -0.11
NPLOC4-219ENST00000576713 PREX1Q8TCU6 1659 aa14.36□□□□□ -0.11
NPLOC4-219ENST00000576713 ESF1Q9H501 851 aaKnown RBP14.36□□□□□ -0.11
NPLOC4-219ENST00000576713 STK24Q9Y6E0 443 aa14.36□□□□□ -0.11
NPLOC4-219ENST00000576713 PZPP20742 1482 aa14.35□□□□□ -0.11
NPLOC4-219ENST00000576713 HFM1A2PYH4 1435 aa14.34□□□□□ -0.11
NPLOC4-219ENST00000576713 PSEN1P49768 467 aa14.34□□□□□ -0.11
NPLOC4-219ENST00000576713 EVX2Q03828 476 aa14.34□□□□□ -0.11
NPLOC4-219ENST00000576713 PAXIP1Q6ZW49 1069 aaPredicted RBP14.34□□□□□ -0.11
NPLOC4-219ENST00000576713 LMTK2Q8IWU2 1503 aa14.34□□□□□ -0.11
NPLOC4-219ENST00000576713 NPATQ14207 1427 aa14.32□□□□□ -0.12
NPLOC4-219ENST00000576713 NKX1-1Q15270 411 aaPredicted RBP14.32□□□□□ -0.12
NPLOC4-219ENST00000576713 MYO3AQ8NEV4 1616 aa14.32□□□□□ -0.12
NPLOC4-219ENST00000576713 EFCAB6Q5THR3 1501 aa14.31□□□□□ -0.12
NPLOC4-219ENST00000576713 SETD1BQ9UPS6 1966 aaKnown RBP14.31□□□□□ -0.12
NPLOC4-219ENST00000576713 HSPA2P54652 639 aa14.31□□□□□ -0.12
NPLOC4-219ENST00000576713 POTEHQ6S545 545 aa14.31□□□□□ -0.12
NPLOC4-219ENST00000576713 SPRYD3Q8NCJ5 442 aa14.31□□□□□ -0.12
NPLOC4-219ENST00000576713 SPATA31D1Q6ZQQ2 1576 aa14.3□□□□□ -0.12
NPLOC4-219ENST00000576713 IQGAP3Q86VI3 1631 aa14.3□□□□□ -0.12
NPLOC4-219ENST00000576713 CFAP44Q96MT7 982 aa14.3□□□□□ -0.12
NPLOC4-219ENST00000576713 ERVK-7P63135 1459 aa14.3□□□□□ -0.12
NPLOC4-219ENST00000576713 MS4A3Q96HJ5 214 aa14.29□□□□□ -0.12
NPLOC4-219ENST00000576713 ARHGAP31Q2M1Z3 1444 aa14.29□□□□□ -0.12
NPLOC4-219ENST00000576713 KANK1Q14678 1352 aa14.28□□□□□ -0.12
NPLOC4-219ENST00000576713 TET3O43151 1660 aa14.27□□□□□ -0.12
NPLOC4-219ENST00000576713 SYNMO15061 1565 aa14.27□□□□□ -0.12
NPLOC4-219ENST00000576713 UHRF1BP1Q6BDS2 1440 aa14.27□□□□□ -0.12
NPLOC4-219ENST00000576713 TNRQ92752 1358 aa14.27□□□□□ -0.12
NPLOC4-219ENST00000576713 E9PCH4 1651 aa14.26□□□□□ -0.13
NPLOC4-219ENST00000576713 ZNF142P52746 1687 aaPredicted RBP14.26□□□□□ -0.13
NPLOC4-219ENST00000576713 CEP170BQ9Y4F5 1589 aaPredicted RBP14.26□□□□□ -0.13
NPLOC4-219ENST00000576713 NUP155O75694 1391 aa14.26□□□□□ -0.13
NPLOC4-219ENST00000576713 STRCQ7RTU9 1775 aa14.24□□□□□ -0.13
NPLOC4-219ENST00000576713 HAP1P54257 671 aaPredicted RBP14.24□□□□□ -0.13
NPLOC4-219ENST00000576713 NOS1P29475 1434 aa14.24□□□□□ -0.13
NPLOC4-219ENST00000576713 UGGT1Q9NYU2 1555 aa14.22□□□□□ -0.13
NPLOC4-219ENST00000576713 CFAP65Q6ZU64 1925 aaKnown RBP14.22□□□□□ -0.13
NPLOC4-219ENST00000576713 TRPC6Q9Y210 931 aa14.22□□□□□ -0.13
NPLOC4-219ENST00000576713 A2ML1A8K2U0 1454 aa14.22□□□□□ -0.13
NPLOC4-219ENST00000576713 SETD5Q9C0A6 1442 aa14.22□□□□□ -0.13
NPLOC4-219ENST00000576713 RAB3GAP2Q9H2M9 1393 aa14.21□□□□□ -0.14
NPLOC4-219ENST00000576713 GTPBP6O43824 516 aaPredicted RBP14.2□□□□□ -0.14
NPLOC4-219ENST00000576713 PIK3C2BO00750 1634 aa14.19□□□□□ -0.14
NPLOC4-219ENST00000576713 RPRD2Q5VT52 1461 aaKnown RBP14.19□□□□□ -0.14
NPLOC4-219ENST00000576713 NLRP1Q9C000 1473 aa14.19□□□□□ -0.14
NPLOC4-219ENST00000576713 CLCN6P51797 869 aa14.19□□□□□ -0.14
NPLOC4-219ENST00000576713 UBR1Q8IWV7 1749 aa14.18□□□□□ -0.14
NPLOC4-219ENST00000576713 GALR2O43603 387 aaPredicted RBP14.18□□□□□ -0.14
NPLOC4-219ENST00000576713 PLA2R1Q13018 1463 aa14.18□□□□□ -0.14
NPLOC4-219ENST00000576713 TRIM52Q96A61 297 aa14.17□□□□□ -0.14
NPLOC4-219ENST00000576713 IDI1Q13907 227 aa14.16□□□□□ -0.14
NPLOC4-219ENST00000576713 TMEM106CQ9BVX2 250 aa14.16□□□□□ -0.14
NPLOC4-219ENST00000576713 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
NPLOC4-219ENST00000576713 ILDR1Q86SU0 546 aaPredicted RBP14.15□□□□□ -0.14
NPLOC4-219ENST00000576713 PTPRTO14522 1441 aa14.15□□□□□ -0.14
NPLOC4-219ENST00000576713 NCKAP5LQ9HCH0 1330 aa14.15□□□□□ -0.15
NPLOC4-219ENST00000576713 NEURL4Q96JN8 1562 aa14.14□□□□□ -0.15
NPLOC4-219ENST00000576713 SPHKAPQ2M3C7 1700 aa14.14□□□□□ -0.15
NPLOC4-219ENST00000576713 CLTCL1P53675 1640 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms