RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 AMER1Q5JTC6 1135 aaPredicted RBP11.9□□□□□ -0.5
NCBP3-204ENST00000574911 KNSTRNQ9Y448 316 aa11.9□□□□□ -0.5
NCBP3-204ENST00000574911 MYOM1P52179 1685 aa11.9□□□□□ -0.51
NCBP3-204ENST00000574911 MYOM2P54296 1465 aa11.89□□□□□ -0.51
NCBP3-204ENST00000574911 KIF3BO15066 747 aa11.89□□□□□ -0.51
NCBP3-204ENST00000574911 PPP2R1AP30153 589 aa11.89□□□□□ -0.51
NCBP3-204ENST00000574911 EIF3AQ14152 1382 aaKnown RBP11.89□□□□□ -0.51
NCBP3-204ENST00000574911 ASXL1Q8IXJ9 1541 aa11.89□□□□□ -0.51
NCBP3-204ENST00000574911 ERICH6Q7L0X2 663 aa11.89□□□□□ -0.51
NCBP3-204ENST00000574911 MAP3K4Q9Y6R4 1608 aa11.89□□□□□ -0.51
NCBP3-204ENST00000574911 NPC1L1Q9UHC9 1359 aa11.88□□□□□ -0.51
NCBP3-204ENST00000574911 EFCAB6Q5THR3 1501 aa11.88□□□□□ -0.51
NCBP3-204ENST00000574911 ADAMTS8Q9UP79 889 aa11.88□□□□□ -0.51
NCBP3-204ENST00000574911 ASXL2Q76L83 1435 aa11.88□□□□□ -0.51
NCBP3-204ENST00000574911 LMTK2Q8IWU2 1503 aa11.87□□□□□ -0.51
NCBP3-204ENST00000574911 IFT172Q9UG01 1749 aa11.87□□□□□ -0.51
NCBP3-204ENST00000574911 ABCA6Q8N139 1617 aa11.87□□□□□ -0.51
NCBP3-204ENST00000574911 PIK3C2GO75747 1445 aa11.87□□□□□ -0.51
NCBP3-204ENST00000574911 UGGT1Q9NYU2 1555 aa11.87□□□□□ -0.51
NCBP3-204ENST00000574911 KIDINS220Q9ULH0 1771 aa11.86□□□□□ -0.51
NCBP3-204ENST00000574911 KDM5AP29375 1690 aaKnown RBP11.86□□□□□ -0.51
NCBP3-204ENST00000574911 NRXN1Q9ULB1 1477 aa11.85□□□□□ -0.51
NCBP3-204ENST00000574911 PPRC1Q5VV67 1664 aaKnown RBP11.85□□□□□ -0.51
NCBP3-204ENST00000574911 KIF1BO60333 1816 aa11.85□□□□□ -0.51
NCBP3-204ENST00000574911 CFAP70Q5T0N1 1121 aa11.84□□□□□ -0.51
NCBP3-204ENST00000574911 MYT1LQ9UL68 1186 aa11.84□□□□□ -0.51
NCBP3-204ENST00000574911 ERVK-7P63135 1459 aa11.84□□□□□ -0.51
NCBP3-204ENST00000574911 ADGRF5Q8IZF2 1346 aa11.84□□□□□ -0.51
NCBP3-204ENST00000574911 MROH2AA6NES4 1674 aa11.84□□□□□ -0.51
NCBP3-204ENST00000574911 WDR43Q15061 677 aaKnown RBP eCLIP11.84□□□□□ -0.51
NCBP3-204ENST00000574911 ZNF521Q96K83 1311 aa11.84□□□□□ -0.51
NCBP3-204ENST00000574911 PLEKHH1Q9ULM0 1364 aa11.84□□□□□ -0.51
NCBP3-204ENST00000574911 TCERG1O14776 1098 aaKnown RBP11.83□□□□□ -0.52
NCBP3-204ENST00000574911 MYO3AQ8NEV4 1616 aa11.83□□□□□ -0.52
NCBP3-204ENST00000574911 ZNF518AQ6AHZ1 1483 aa11.83□□□□□ -0.52
NCBP3-204ENST00000574911 NOP58Q9Y2X3 529 aaKnown RBP11.82□□□□□ -0.52
NCBP3-204ENST00000574911 ADGRB3O60242 1522 aa11.82□□□□□ -0.52
NCBP3-204ENST00000574911 PLIN1O60240 522 aa11.82□□□□□ -0.52
NCBP3-204ENST00000574911 CRBNQ96SW2 442 aa11.81□□□□□ -0.52
NCBP3-204ENST00000574911 SETBP1Q9Y6X0 1596 aa11.81□□□□□ -0.52
NCBP3-204ENST00000574911 DUSP27Q5VZP5 1158 aa11.8□□□□□ -0.52
NCBP3-204ENST00000574911 SBNO2Q9Y2G9 1366 aa11.8□□□□□ -0.52
NCBP3-204ENST00000574911 ANP32AP39687 249 aaKnown RBP11.8□□□□□ -0.52
NCBP3-204ENST00000574911 IPO9Q96P70 1041 aaKnown RBP11.8□□□□□ -0.52
NCBP3-204ENST00000574911 CFAP74Q9C0B2 1584 aa11.79□□□□□ -0.52
NCBP3-204ENST00000574911 FRMPD1Q5SYB0 1578 aa11.79□□□□□ -0.52
NCBP3-204ENST00000574911 MS4A1P11836 297 aa11.79□□□□□ -0.52
NCBP3-204ENST00000574911 GOLGA2Q08379 1002 aa11.79□□□□□ -0.52
NCBP3-204ENST00000574911 CARD14Q9BXL6 1004 aa11.79□□□□□ -0.52
NCBP3-204ENST00000574911 MLH3Q9UHC1 1453 aa11.79□□□□□ -0.52
NCBP3-204ENST00000574911 NOS1P29475 1434 aa11.78□□□□□ -0.52
NCBP3-204ENST00000574911 POGZQ7Z3K3 1410 aa11.78□□□□□ -0.52
NCBP3-204ENST00000574911 PAK3O75914 559 aaPredicted RBP11.78□□□□□ -0.52
NCBP3-204ENST00000574911 TRMT2AQ8IZ69 625 aaKnown RBP11.78□□□□□ -0.52
NCBP3-204ENST00000574911 SLFN5Q08AF3 891 aa11.77□□□□□ -0.52
NCBP3-204ENST00000574911 NPATQ14207 1427 aa11.77□□□□□ -0.53
NCBP3-204ENST00000574911 C20orf194Q5TEA3 1177 aa11.77□□□□□ -0.53
NCBP3-204ENST00000574911 CD109Q6YHK3 1445 aa11.76□□□□□ -0.53
NCBP3-204ENST00000574911 PPLO60437 1756 aa11.76□□□□□ -0.53
NCBP3-204ENST00000574911 PDE4AP27815 886 aa11.76□□□□□ -0.53
NCBP3-204ENST00000574911 BACH2Q9BYV9 841 aa11.76□□□□□ -0.53
NCBP3-204ENST00000574911 ZC3H13Q5T200 1668 aaKnown RBP11.76□□□□□ -0.53
NCBP3-204ENST00000574911 CENPJQ9HC77 1338 aaPredicted RBP11.76□□□□□ -0.53
NCBP3-204ENST00000574911 ADGRB1O14514 1584 aa11.75□□□□□ -0.53
NCBP3-204ENST00000574911 HECW2Q9P2P5 1572 aa11.75□□□□□ -0.53
NCBP3-204ENST00000574911 NPM1P06748 294 aaKnown RBP eCLIP11.75□□□□□ -0.53
NCBP3-204ENST00000574911 C14orf93Q9H972 538 aaKnown RBP11.75□□□□□ -0.53
NCBP3-204ENST00000574911 CCDC146Q8IYE0 955 aa11.74□□□□□ -0.53
NCBP3-204ENST00000574911 ABCC3O15438 1527 aa11.74□□□□□ -0.53
NCBP3-204ENST00000574911 RPGRIP1LQ68CZ1 1315 aa11.74□□□□□ -0.53
NCBP3-204ENST00000574911 KDM2BQ8NHM5 1336 aa11.74□□□□□ -0.53
NCBP3-204ENST00000574911 POLR3AO14802 1390 aaPredicted RBP11.74□□□□□ -0.53
NCBP3-204ENST00000574911 ZBTB47Q9UFB7 747 aaPredicted RBP11.73□□□□□ -0.53
NCBP3-204ENST00000574911 QRICH2Q9H0J4 1663 aa11.73□□□□□ -0.53
NCBP3-204ENST00000574911 APAF1O14727 1248 aa11.73□□□□□ -0.53
NCBP3-204ENST00000574911 NGEFQ8N5V2 710 aa11.73□□□□□ -0.53
NCBP3-204ENST00000574911 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.73□□□□□ -0.53
NCBP3-204ENST00000574911 CHGAP10645 457 aaKnown RBP11.72□□□□□ -0.53
NCBP3-204ENST00000574911 NKTRP30414 1462 aaKnown RBP11.72□□□□□ -0.53
NCBP3-204ENST00000574911 SPINK5Q9NQ38 1064 aaPredicted RBP11.72□□□□□ -0.53
NCBP3-204ENST00000574911 GGT6Q6P531 493 aa11.71□□□□□ -0.53
NCBP3-204ENST00000574911 TRAK1Q9UPV9 953 aa11.71□□□□□ -0.53
NCBP3-204ENST00000574911 CAMSAP1Q5T5Y3 1602 aa11.71□□□□□ -0.53
NCBP3-204ENST00000574911 NSD3Q9BZ95 1437 aa11.71□□□□□ -0.53
NCBP3-204ENST00000574911 E9PSI1 815 aa11.71□□□□□ -0.54
NCBP3-204ENST00000574911 USP32Q8NFA0 1604 aa11.7□□□□□ -0.54
NCBP3-204ENST00000574911 CENPQQ7L2Z9 268 aaPredicted RBP11.7□□□□□ -0.54
NCBP3-204ENST00000574911 PIK3C2BO00750 1634 aa11.7□□□□□ -0.54
NCBP3-204ENST00000574911 OSCARQ8IYS5 282 aa11.7□□□□□ -0.54
NCBP3-204ENST00000574911 NEO1Q92859 1461 aa11.7□□□□□ -0.54
NCBP3-204ENST00000574911 SHPRHQ149N8 1683 aa11.7□□□□□ -0.54
NCBP3-204ENST00000574911 SIGLEC1Q9BZZ2 1709 aa11.69□□□□□ -0.54
NCBP3-204ENST00000574911 SKAP1Q86WV1 359 aa11.68□□□□□ -0.54
NCBP3-204ENST00000574911 PUS7Q96PZ0 661 aaKnown RBP11.68□□□□□ -0.54
NCBP3-204ENST00000574911 SLC12A5Q9H2X9 1139 aa11.68□□□□□ -0.54
NCBP3-204ENST00000574911 TMEM132EQ6IEE7 984 aa11.68□□□□□ -0.54
NCBP3-204ENST00000574911 NPM2Q86SE8 214 aaKnown RBP11.68□□□□□ -0.54
NCBP3-204ENST00000574911 GLI2P10070 1586 aa11.68□□□□□ -0.54
NCBP3-204ENST00000574911 NEXMIFQ5QGS0 1516 aa11.68□□□□□ -0.54
NCBP3-204ENST00000574911 MORC1Q86VD1 984 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 219 ms