RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 PIK3C2BO00750 1634 aa15.25■□□□□ 0.03
RPA1-206ENST00000573994 MED14O60244 1454 aa15.24■□□□□ 0.03
RPA1-206ENST00000573994 NOS1P29475 1434 aa15.24■□□□□ 0.03
RPA1-206ENST00000573994 IQGAP1P46940 1657 aa15.22■□□□□ 0.03
RPA1-206ENST00000573994 IQSEC2Q5JU85 1478 aa15.22■□□□□ 0.03
RPA1-206ENST00000573994 SCAF11Q99590 1463 aaKnown RBP15.22■□□□□ 0.03
RPA1-206ENST00000573994 TET3O43151 1660 aa15.22■□□□□ 0.03
RPA1-206ENST00000573994 ARHGAP23Q9P227 1491 aa15.21■□□□□ 0.03
RPA1-206ENST00000573994 IDI1Q13907 227 aa15.21■□□□□ 0.03
RPA1-206ENST00000573994 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
RPA1-206ENST00000573994 SLIT1O75093 1534 aa15.21■□□□□ 0.03
RPA1-206ENST00000573994 RPRD2Q5VT52 1461 aaKnown RBP15.2■□□□□ 0.02
RPA1-206ENST00000573994 LTKP29376 864 aa15.2■□□□□ 0.02
RPA1-206ENST00000573994 ADGRB3O60242 1522 aa15.2■□□□□ 0.02
RPA1-206ENST00000573994 NUP155O75694 1391 aa15.19■□□□□ 0.02
RPA1-206ENST00000573994 TMEM2Q9UHN6 1383 aa15.19■□□□□ 0.02
RPA1-206ENST00000573994 IQGAP3Q86VI3 1631 aa15.18■□□□□ 0.02
RPA1-206ENST00000573994 TXNDC2Q86VQ3 553 aa15.18■□□□□ 0.02
RPA1-206ENST00000573994 CPS1P31327 1500 aa15.17■□□□□ 0.02
RPA1-206ENST00000573994 GCC2Q8IWJ2 1684 aa15.17■□□□□ 0.02
RPA1-206ENST00000573994 UBAP1LF5GYI3 381 aa15.16■□□□□ 0.02
RPA1-206ENST00000573994 EID1Q9Y6B2 187 aa15.16■□□□□ 0.02
RPA1-206ENST00000573994 E9PCH4 1651 aa15.16■□□□□ 0.02
RPA1-206ENST00000573994 SLC52A1Q9NWF4 448 aa15.15■□□□□ 0.02
RPA1-206ENST00000573994 NAIPQ13075 1403 aa15.15■□□□□ 0.02
RPA1-206ENST00000573994 KDM5AP29375 1690 aaKnown RBP15.14■□□□□ 0.01
RPA1-206ENST00000573994 CHGAP10645 457 aaKnown RBP15.11■□□□□ 0.01
RPA1-206ENST00000573994 POTEHQ6S545 545 aa15.11■□□□□ 0.01
RPA1-206ENST00000573994 STRCP1A6NGW2 1772 aa15.11■□□□□ 0.01
RPA1-206ENST00000573994 LRRC7Q96NW7 1537 aa15.1■□□□□ 0.01
RPA1-206ENST00000573994 TMEM131LA2VDJ0 1609 aa15.1■□□□□ 0.01
RPA1-206ENST00000573994 HFM1A2PYH4 1435 aa15.09■□□□□ 0.01
RPA1-206ENST00000573994 ZFYVE9O95405 1425 aa15.09■□□□□ 0.01
RPA1-206ENST00000573994 RIMS2Q9UQ26 1411 aa15.09■□□□□ 0.01
RPA1-206ENST00000573994 SLC26A8Q96RN1 970 aa15.09■□□□□ 0.01
RPA1-206ENST00000573994 PPP1R15AO75807 674 aaPredicted RBP15.07■□□□□ 0
RPA1-206ENST00000573994 PIP4K2BP78356 416 aa15.07■□□□□ 0
RPA1-206ENST00000573994 AKT1S1Q96B36 256 aa15.07■□□□□ 0
RPA1-206ENST00000573994 BCANQ96GW7 911 aa15.07■□□□□ 0
RPA1-206ENST00000573994 MYO5BQ9ULV0 1848 aa15.06■□□□□ 0
RPA1-206ENST00000573994 NUTM2DQ5VT03 806 aaPredicted RBP15.06■□□□□ 0
RPA1-206ENST00000573994 TRIM52Q96A61 297 aa15.05■□□□□ -0
RPA1-206ENST00000573994 ALKQ9UM73 1620 aa15.04■□□□□ -0
RPA1-206ENST00000573994 PLEKHG1Q9ULL1 1385 aa15.04■□□□□ -0
RPA1-206ENST00000573994 TOM1O60784 492 aa15.04■□□□□ -0
RPA1-206ENST00000573994 SPHKAPQ2M3C7 1700 aa15.03■□□□□ -0
RPA1-206ENST00000573994 TRPM2O94759 1503 aa15.02□□□□□ -0.01
RPA1-206ENST00000573994 CLTCL1P53675 1640 aa15.01□□□□□ -0.01
RPA1-206ENST00000573994 NWD1Q149M9 1564 aa15.01□□□□□ -0.01
RPA1-206ENST00000573994 TMEM94Q12767 1356 aa15□□□□□ -0.01
RPA1-206ENST00000573994 KCNA6P17658 529 aa15□□□□□ -0.01
RPA1-206ENST00000573994 ABCF1Q8NE71 845 aaKnown RBP eCLIP15□□□□□ -0.01
RPA1-206ENST00000573994 RBM33Q96EV2 1170 aaKnown RBP15□□□□□ -0.01
RPA1-206ENST00000573994 HSPA1LP34931 641 aa14.99□□□□□ -0.01
RPA1-206ENST00000573994 HDGFP51858 240 aaKnown RBP14.99□□□□□ -0.01
RPA1-206ENST00000573994 NKTRP30414 1462 aaKnown RBP14.99□□□□□ -0.01
RPA1-206ENST00000573994 ADAMTS13Q76LX8 1427 aa14.99□□□□□ -0.01
RPA1-206ENST00000573994 ZNF326Q5BKZ1 582 aaKnown RBP14.98□□□□□ -0.01
RPA1-206ENST00000573994 DISP3Q9P2K9 1392 aa14.98□□□□□ -0.01
RPA1-206ENST00000573994 PROSER2Q86WR7 435 aaPredicted RBP14.96□□□□□ -0.01
RPA1-206ENST00000573994 XIRP1Q702N8 1843 aaKnown RBP14.96□□□□□ -0.01
RPA1-206ENST00000573994 DIP2AQ14689 1571 aa14.95□□□□□ -0.02
RPA1-206ENST00000573994 TBX22Q9Y458 520 aa14.94□□□□□ -0.02
RPA1-206ENST00000573994 NEXMIFQ5QGS0 1516 aa14.93□□□□□ -0.02
RPA1-206ENST00000573994 CHRDL2Q6WN34 429 aa14.93□□□□□ -0.02
RPA1-206ENST00000573994 NRXN3Q9Y4C0 1643 aa14.92□□□□□ -0.02
RPA1-206ENST00000573994 SETBP1Q9Y6X0 1596 aa14.91□□□□□ -0.02
RPA1-206ENST00000573994 PTPRUQ92729 1446 aa14.91□□□□□ -0.02
RPA1-206ENST00000573994 MSH6P52701 1360 aa14.9□□□□□ -0.02
RPA1-206ENST00000573994 SPDYE2BA6NHP3 402 aa14.9□□□□□ -0.02
RPA1-206ENST00000573994 SPDYE6P0CI01 402 aa14.9□□□□□ -0.02
RPA1-206ENST00000573994 SPDYE2Q495Y8 402 aa14.9□□□□□ -0.02
RPA1-206ENST00000573994 SETD5Q9C0A6 1442 aa14.9□□□□□ -0.02
RPA1-206ENST00000573994 ACIN1Q9UKV3 1341 aaKnown RBP14.9□□□□□ -0.02
RPA1-206ENST00000573994 CHD2O14647 1828 aaKnown RBP14.89□□□□□ -0.03
RPA1-206ENST00000573994 PIK3R4Q99570 1358 aa14.88□□□□□ -0.03
RPA1-206ENST00000573994 C14orf37Q86TY3 774 aa14.88□□□□□ -0.03
RPA1-206ENST00000573994 MPHOSPH9Q99550 1183 aa14.88□□□□□ -0.03
RPA1-206ENST00000573994 METP08581 1390 aa14.87□□□□□ -0.03
RPA1-206ENST00000573994 RAB3GAP2Q9H2M9 1393 aa14.87□□□□□ -0.03
RPA1-206ENST00000573994 MED1Q15648 1581 aaPredicted RBP14.87□□□□□ -0.03
RPA1-206ENST00000573994 CCDC144AA2RUR9 1427 aa14.87□□□□□ -0.03
RPA1-206ENST00000573994 AMOTL2Q9Y2J4 779 aa14.87□□□□□ -0.03
RPA1-206ENST00000573994 KIF1BO60333 1816 aa14.87□□□□□ -0.03
RPA1-206ENST00000573994 FAM135BQ49AJ0 1406 aa14.85□□□□□ -0.03
RPA1-206ENST00000573994 XRN1Q8IZH2 1706 aaKnown RBP14.85□□□□□ -0.03
RPA1-206ENST00000573994 ROBO1Q9Y6N7 1651 aa14.84□□□□□ -0.03
RPA1-206ENST00000573994 ILDR2Q71H61 639 aa14.84□□□□□ -0.03
RPA1-206ENST00000573994 REM2Q8IYK8 340 aaPredicted RBP14.84□□□□□ -0.03
RPA1-206ENST00000573994 SPATA31E1Q6ZUB1 1445 aa14.82□□□□□ -0.04
RPA1-206ENST00000573994 NCOA3Q9Y6Q9 1424 aa14.82□□□□□ -0.04
RPA1-206ENST00000573994 VGFO15240 615 aaPredicted RBP14.81□□□□□ -0.04
RPA1-206ENST00000573994 RGL3Q3MIN7 710 aa14.81□□□□□ -0.04
RPA1-206ENST00000573994 SLAIN2Q9P270 581 aa14.81□□□□□ -0.04
RPA1-206ENST00000573994 RPGRIP1LQ68CZ1 1315 aa14.81□□□□□ -0.04
RPA1-206ENST00000573994 PPLO60437 1756 aa14.8□□□□□ -0.04
RPA1-206ENST00000573994 ATF3P18847 181 aa14.79□□□□□ -0.04
RPA1-206ENST00000573994 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.79□□□□□ -0.04
RPA1-206ENST00000573994 SETD1AO15047 1707 aaKnown RBP14.78□□□□□ -0.04
RPA1-206ENST00000573994 ADGRF5Q8IZF2 1346 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms