RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 TRPM2O94759 1503 aa20.12■□□□□ 0.81
RPAIN-213ENST00000573577 IQSEC2Q5JU85 1478 aa20.11■□□□□ 0.81
RPAIN-213ENST00000573577 ZFYVE9O95405 1425 aa20.11■□□□□ 0.81
RPAIN-213ENST00000573577 CHGAP10645 457 aaKnown RBP20.11■□□□□ 0.81
RPAIN-213ENST00000573577 MYO5BQ9ULV0 1848 aa20.1■□□□□ 0.81
RPAIN-213ENST00000573577 RIMS2Q9UQ26 1411 aa20.1■□□□□ 0.81
RPAIN-213ENST00000573577 RAB3GAP2Q9H2M9 1393 aa20.09■□□□□ 0.81
RPAIN-213ENST00000573577 CPS1P31327 1500 aa20.09■□□□□ 0.81
RPAIN-213ENST00000573577 HRCP23327 699 aa20.08■□□□□ 0.81
RPAIN-213ENST00000573577 CLTCL1P53675 1640 aa20.07■□□□□ 0.8
RPAIN-213ENST00000573577 HDGFP51858 240 aaKnown RBP20.06■□□□□ 0.8
RPAIN-213ENST00000573577 PLEKHG1Q9ULL1 1385 aa20.05■□□□□ 0.8
RPAIN-213ENST00000573577 PPP1R15AO75807 674 aaPredicted RBP20.04■□□□□ 0.8
RPAIN-213ENST00000573577 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.04■□□□□ 0.8
RPAIN-213ENST00000573577 MPHOSPH9Q99550 1183 aa20.03■□□□□ 0.8
RPAIN-213ENST00000573577 STRCP1A6NGW2 1772 aa20.01■□□□□ 0.79
RPAIN-213ENST00000573577 BCANQ96GW7 911 aa20.01■□□□□ 0.79
RPAIN-213ENST00000573577 SLC26A8Q96RN1 970 aa20.01■□□□□ 0.79
RPAIN-213ENST00000573577 NUTM2DQ5VT03 806 aaPredicted RBP19.99■□□□□ 0.79
RPAIN-213ENST00000573577 ZNF326Q5BKZ1 582 aaKnown RBP19.98■□□□□ 0.79
RPAIN-213ENST00000573577 LRRC7Q96NW7 1537 aa19.97■□□□□ 0.79
RPAIN-213ENST00000573577 KIF1BO60333 1816 aa19.97■□□□□ 0.79
RPAIN-213ENST00000573577 CCDC144AA2RUR9 1427 aa19.95■□□□□ 0.78
RPAIN-213ENST00000573577 NEXMIFQ5QGS0 1516 aa19.95■□□□□ 0.78
RPAIN-213ENST00000573577 ADAMTS13Q76LX8 1427 aa19.94■□□□□ 0.78
RPAIN-213ENST00000573577 UBAP1LF5GYI3 381 aa19.94■□□□□ 0.78
RPAIN-213ENST00000573577 KCNA6P17658 529 aa19.94■□□□□ 0.78
RPAIN-213ENST00000573577 DIP2AQ14689 1571 aa19.94■□□□□ 0.78
RPAIN-213ENST00000573577 NWD1Q149M9 1564 aa19.93■□□□□ 0.78
RPAIN-213ENST00000573577 TBX22Q9Y458 520 aa19.93■□□□□ 0.78
RPAIN-213ENST00000573577 NKTRP30414 1462 aaKnown RBP19.91■□□□□ 0.78
RPAIN-213ENST00000573577 SETBP1Q9Y6X0 1596 aa19.91■□□□□ 0.78
RPAIN-213ENST00000573577 RPGRIP1LQ68CZ1 1315 aa19.89■□□□□ 0.77
RPAIN-213ENST00000573577 NRXN3Q9Y4C0 1643 aa19.89■□□□□ 0.77
RPAIN-213ENST00000573577 PIK3R4Q99570 1358 aa19.88■□□□□ 0.77
RPAIN-213ENST00000573577 SPATA31E1Q6ZUB1 1445 aa19.87■□□□□ 0.77
RPAIN-213ENST00000573577 TMEM94Q12767 1356 aa19.87■□□□□ 0.77
RPAIN-213ENST00000573577 TOM1O60784 492 aa19.87■□□□□ 0.77
RPAIN-213ENST00000573577 CHD2O14647 1828 aaKnown RBP19.86■□□□□ 0.77
RPAIN-213ENST00000573577 VGFO15240 615 aaPredicted RBP19.86■□□□□ 0.77
RPAIN-213ENST00000573577 PROSER2Q86WR7 435 aaPredicted RBP19.85■□□□□ 0.77
RPAIN-213ENST00000573577 XIRP1Q702N8 1843 aaKnown RBP19.85■□□□□ 0.77
RPAIN-213ENST00000573577 ALKQ9UM73 1620 aa19.84■□□□□ 0.77
RPAIN-213ENST00000573577 PPLO60437 1756 aa19.83■□□□□ 0.77
RPAIN-213ENST00000573577 PCGF6Q9BYE7 350 aa19.83■□□□□ 0.77
RPAIN-213ENST00000573577 RGL3Q3MIN7 710 aa19.82■□□□□ 0.76
RPAIN-213ENST00000573577 ANKRD30BQ9BXX2 1392 aa19.82■□□□□ 0.76
RPAIN-213ENST00000573577 PIP4K2BP78356 416 aa19.81■□□□□ 0.76
RPAIN-213ENST00000573577 RBM33Q96EV2 1170 aaKnown RBP19.81■□□□□ 0.76
RPAIN-213ENST00000573577 PTPRUQ92729 1446 aa19.81■□□□□ 0.76
RPAIN-213ENST00000573577 METP08581 1390 aa19.81■□□□□ 0.76
RPAIN-213ENST00000573577 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
RPAIN-213ENST00000573577 AMOTL2Q9Y2J4 779 aa19.79■□□□□ 0.76
RPAIN-213ENST00000573577 XRN1Q8IZH2 1706 aaKnown RBP19.78■□□□□ 0.76
RPAIN-213ENST00000573577 IFT172Q9UG01 1749 aa19.77■□□□□ 0.76
RPAIN-213ENST00000573577 NCOA3Q9Y6Q9 1424 aa19.76■□□□□ 0.75
RPAIN-213ENST00000573577 ADGRF5Q8IZF2 1346 aa19.76■□□□□ 0.75
RPAIN-213ENST00000573577 MSH6P52701 1360 aa19.75■□□□□ 0.75
RPAIN-213ENST00000573577 SETD1AO15047 1707 aaKnown RBP19.75■□□□□ 0.75
RPAIN-213ENST00000573577 PIK3C2GO75747 1445 aa19.72■□□□□ 0.75
RPAIN-213ENST00000573577 C14orf37Q86TY3 774 aa19.72■□□□□ 0.75
RPAIN-213ENST00000573577 MYOM2P54296 1465 aa19.71■□□□□ 0.75
RPAIN-213ENST00000573577 DHX57Q6P158 1386 aaKnown RBP19.7■□□□□ 0.74
RPAIN-213ENST00000573577 HSPA1LP34931 641 aa19.7■□□□□ 0.74
RPAIN-213ENST00000573577 PRAG1Q86YV5 1406 aa19.69■□□□□ 0.74
RPAIN-213ENST00000573577 NRXN1Q9ULB1 1477 aa19.69■□□□□ 0.74
RPAIN-213ENST00000573577 PTCH1Q13635 1447 aa19.68■□□□□ 0.74
RPAIN-213ENST00000573577 PPP4R3CPQ6ZMV5 832 aa19.68■□□□□ 0.74
RPAIN-213ENST00000573577 C19orf44Q9H6X5 657 aa19.68■□□□□ 0.74
RPAIN-213ENST00000573577 FAM135BQ49AJ0 1406 aa19.68■□□□□ 0.74
RPAIN-213ENST00000573577 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.65■□□□□ 0.74
RPAIN-213ENST00000573577 SLAIN2Q9P270 581 aa19.65■□□□□ 0.74
RPAIN-213ENST00000573577 ROBO2Q9HCK4 1378 aa19.65■□□□□ 0.74
RPAIN-213ENST00000573577 DCCP43146 1447 aa19.65■□□□□ 0.74
RPAIN-213ENST00000573577 ATF3P18847 181 aa19.64■□□□□ 0.73
RPAIN-213ENST00000573577 CADPS2Q86UW7 1296 aa19.64■□□□□ 0.73
RPAIN-213ENST00000573577 ADGRL3Q9HAR2 1447 aa19.64■□□□□ 0.73
RPAIN-213ENST00000573577 ASXL1Q8IXJ9 1541 aa19.64■□□□□ 0.73
RPAIN-213ENST00000573577 ROBO1Q9Y6N7 1651 aa19.63■□□□□ 0.73
RPAIN-213ENST00000573577 LAMC1P11047 1609 aa19.62■□□□□ 0.73
RPAIN-213ENST00000573577 C14orf93Q9H972 538 aaKnown RBP19.62■□□□□ 0.73
RPAIN-213ENST00000573577 LRPPRCP42704 1394 aaKnown RBP19.61■□□□□ 0.73
RPAIN-213ENST00000573577 DCAF11Q8TEB1 546 aa19.61■□□□□ 0.73
RPAIN-213ENST00000573577 TECPR2O15040 1411 aa19.6■□□□□ 0.73
RPAIN-213ENST00000573577 NALCNQ8IZF0 1738 aa19.6■□□□□ 0.73
RPAIN-213ENST00000573577 TMEM132EQ6IEE7 984 aa19.6■□□□□ 0.73
RPAIN-213ENST00000573577 STAC3Q96MF2 364 aa19.6■□□□□ 0.73
RPAIN-213ENST00000573577 CFAP70Q5T0N1 1121 aa19.59■□□□□ 0.73
RPAIN-213ENST00000573577 STK26Q9P289 416 aa19.59■□□□□ 0.73
RPAIN-213ENST00000573577 YTHDC2Q9H6S0 1430 aaKnown RBP19.59■□□□□ 0.73
RPAIN-213ENST00000573577 ABCC11Q96J66 1382 aa19.58■□□□□ 0.73
RPAIN-213ENST00000573577 KDM2AQ9Y2K7 1162 aa19.58■□□□□ 0.72
RPAIN-213ENST00000573577 KNDC1Q76NI1 1749 aa19.57■□□□□ 0.72
RPAIN-213ENST00000573577 MST1RQ04912 1400 aa19.56■□□□□ 0.72
RPAIN-213ENST00000573577 NEUROD1Q13562 356 aa19.55■□□□□ 0.72
RPAIN-213ENST00000573577 SIN3AQ96ST3 1273 aa19.55■□□□□ 0.72
RPAIN-213ENST00000573577 CLSPNQ9HAW4 1339 aa19.53■□□□□ 0.72
RPAIN-213ENST00000573577 ADGRB1O14514 1584 aa19.53■□□□□ 0.72
RPAIN-213ENST00000573577 BRINP3Q76B58 766 aa19.52■□□□□ 0.72
RPAIN-213ENST00000573577 WAPLQ7Z5K2 1190 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms