RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 MAP3K1Q13233 1512 aa14.66□□□□□ -0.06
NPLOC4-210ENST00000572824 PTPN23Q9H3S7 1636 aa14.66□□□□□ -0.06
NPLOC4-210ENST00000572824 PLA2R1Q13018 1463 aa14.65□□□□□ -0.06
NPLOC4-210ENST00000572824 CCDC61Q9Y6R9 512 aa14.65□□□□□ -0.06
NPLOC4-210ENST00000572824 EIF2AK4Q9P2K8 1649 aaKnown RBP14.64□□□□□ -0.07
NPLOC4-210ENST00000572824 PAK3O75914 559 aaPredicted RBP14.64□□□□□ -0.07
NPLOC4-210ENST00000572824 TNRQ92752 1358 aa14.63□□□□□ -0.07
NPLOC4-210ENST00000572824 ZC3H13Q5T200 1668 aaKnown RBP14.62□□□□□ -0.07
NPLOC4-210ENST00000572824 RIOK3O14730 519 aaKnown RBP14.62□□□□□ -0.07
NPLOC4-210ENST00000572824 STRCP1A6NGW2 1772 aa14.61□□□□□ -0.07
NPLOC4-210ENST00000572824 ABCC5O15440 1437 aa14.6□□□□□ -0.07
NPLOC4-210ENST00000572824 FAM135AQ9P2D6 1515 aa14.6□□□□□ -0.07
NPLOC4-210ENST00000572824 SPATA31D1Q6ZQQ2 1576 aa14.6□□□□□ -0.07
NPLOC4-210ENST00000572824 MIA2Q96PC5 1412 aa14.59□□□□□ -0.07
NPLOC4-210ENST00000572824 CD44P16070 742 aaKnown RBP14.59□□□□□ -0.07
NPLOC4-210ENST00000572824 WASHC2CQ9Y4E1 1318 aa14.59□□□□□ -0.07
NPLOC4-210ENST00000572824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.59□□□□□ -0.07
NPLOC4-210ENST00000572824 ERVK-7P63135 1459 aa14.58□□□□□ -0.08
NPLOC4-210ENST00000572824 PRDM15P57071 1507 aaPredicted RBP14.58□□□□□ -0.08
NPLOC4-210ENST00000572824 UBR1Q8IWV7 1749 aa14.58□□□□□ -0.08
NPLOC4-210ENST00000572824 VWDEQ8N2E2 1590 aa14.57□□□□□ -0.08
NPLOC4-210ENST00000572824 UGGT1Q9NYU2 1555 aa14.57□□□□□ -0.08
NPLOC4-210ENST00000572824 DEPDC5O75140 1603 aa14.57□□□□□ -0.08
NPLOC4-210ENST00000572824 DAPK1P53355 1430 aa14.57□□□□□ -0.08
NPLOC4-210ENST00000572824 FGD6Q6ZV73 1430 aa14.57□□□□□ -0.08
NPLOC4-210ENST00000572824 DUOX2Q9NRD8 1548 aa14.56□□□□□ -0.08
NPLOC4-210ENST00000572824 TSPY4P0CV99 314 aa14.56□□□□□ -0.08
NPLOC4-210ENST00000572824 TSPY10P0CW01 314 aa14.56□□□□□ -0.08
NPLOC4-210ENST00000572824 KIF15Q9NS87 1388 aa14.56□□□□□ -0.08
NPLOC4-210ENST00000572824 SHANK2Q9UPX8 1470 aa14.56□□□□□ -0.08
NPLOC4-210ENST00000572824 IQGAP1P46940 1657 aa14.55□□□□□ -0.08
NPLOC4-210ENST00000572824 CHGAP10645 457 aaKnown RBP14.55□□□□□ -0.08
NPLOC4-210ENST00000572824 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
NPLOC4-210ENST00000572824 TAOK2Q9UL54 1235 aa14.55□□□□□ -0.08
NPLOC4-210ENST00000572824 C19orf67A6NJJ6 358 aa14.54□□□□□ -0.08
NPLOC4-210ENST00000572824 RSPH4AQ5TD94 716 aa14.54□□□□□ -0.08
NPLOC4-210ENST00000572824 IQSEC2Q5JU85 1478 aa14.54□□□□□ -0.08
NPLOC4-210ENST00000572824 ALKQ9UM73 1620 aa14.54□□□□□ -0.08
NPLOC4-210ENST00000572824 NLRP1Q9C000 1473 aa14.53□□□□□ -0.08
NPLOC4-210ENST00000572824 VGFO15240 615 aaPredicted RBP14.53□□□□□ -0.08
NPLOC4-210ENST00000572824 PIK3C2BO00750 1634 aa14.52□□□□□ -0.08
NPLOC4-210ENST00000572824 ILDR2Q71H61 639 aa14.52□□□□□ -0.09
NPLOC4-210ENST00000572824 BBXQ8WY36 941 aaPredicted RBP14.52□□□□□ -0.09
NPLOC4-210ENST00000572824 RRP7BPQ9NSQ0 103 aa14.52□□□□□ -0.09
NPLOC4-210ENST00000572824 CHIC2Q9UKJ5 165 aa14.52□□□□□ -0.09
NPLOC4-210ENST00000572824 SLC24A1O60721 1099 aa14.51□□□□□ -0.09
NPLOC4-210ENST00000572824 HS6ST3Q8IZP7 471 aa14.5□□□□□ -0.09
NPLOC4-210ENST00000572824 SYNMO15061 1565 aa14.5□□□□□ -0.09
NPLOC4-210ENST00000572824 NPHP4O75161 1426 aaPredicted RBP14.49□□□□□ -0.09
NPLOC4-210ENST00000572824 ERBINQ96RT1 1412 aa14.49□□□□□ -0.09
NPLOC4-210ENST00000572824 DISP3Q9P2K9 1392 aa14.49□□□□□ -0.09
NPLOC4-210ENST00000572824 ZNF467Q7Z7K2 595 aaPredicted RBP14.49□□□□□ -0.09
NPLOC4-210ENST00000572824 KIF12Q96FN5 646 aa14.49□□□□□ -0.09
NPLOC4-210ENST00000572824 XIRP1Q702N8 1843 aaKnown RBP14.49□□□□□ -0.09
NPLOC4-210ENST00000572824 MYO5BQ9ULV0 1848 aa14.48□□□□□ -0.09
NPLOC4-210ENST00000572824 UBAP1LF5GYI3 381 aa14.48□□□□□ -0.09
NPLOC4-210ENST00000572824 SGIP1Q9BQI5 828 aa14.48□□□□□ -0.09
NPLOC4-210ENST00000572824 MED14O60244 1454 aa14.48□□□□□ -0.09
NPLOC4-210ENST00000572824 PLCB2Q00722 1185 aa14.47□□□□□ -0.09
NPLOC4-210ENST00000572824 MAP3K13O43283 966 aa14.46□□□□□ -0.09
NPLOC4-210ENST00000572824 PCDHB8Q9UN66 801 aa14.46□□□□□ -0.09
NPLOC4-210ENST00000572824 PCDHB13Q9Y5F0 798 aa14.46□□□□□ -0.09
NPLOC4-210ENST00000572824 ZNF579Q8NAF0 562 aaKnown RBP14.45□□□□□ -0.1
NPLOC4-210ENST00000572824 CPS1P31327 1500 aa14.45□□□□□ -0.1
NPLOC4-210ENST00000572824 EFCAB6Q5THR3 1501 aa14.45□□□□□ -0.1
NPLOC4-210ENST00000572824 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.44□□□□□ -0.1
NPLOC4-210ENST00000572824 ZFP91Q96JP5 570 aaPredicted RBP14.44□□□□□ -0.1
NPLOC4-210ENST00000572824 PHF12Q96QT6 1004 aa14.44□□□□□ -0.1
NPLOC4-210ENST00000572824 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.44□□□□□ -0.1
NPLOC4-210ENST00000572824 ADGRL2O95490 1459 aa14.44□□□□□ -0.1
NPLOC4-210ENST00000572824 ARHGAP23Q9P227 1491 aa14.44□□□□□ -0.1
NPLOC4-210ENST00000572824 LTKP29376 864 aa14.43□□□□□ -0.1
NPLOC4-210ENST00000572824 ANKLE2Q86XL3 938 aa14.43□□□□□ -0.1
NPLOC4-210ENST00000572824 ARHGAP31Q2M1Z3 1444 aa14.42□□□□□ -0.1
NPLOC4-210ENST00000572824 SLIT1O75093 1534 aa14.42□□□□□ -0.1
NPLOC4-210ENST00000572824 LMTK2Q8IWU2 1503 aa14.42□□□□□ -0.1
NPLOC4-210ENST00000572824 LRRC7Q96NW7 1537 aa14.42□□□□□ -0.1
NPLOC4-210ENST00000572824 STK25O00506 426 aa14.42□□□□□ -0.1
NPLOC4-210ENST00000572824 PIP4K2BP78356 416 aa14.42□□□□□ -0.1
NPLOC4-210ENST00000572824 PPARGC1BQ86YN6 1023 aaKnown RBP14.42□□□□□ -0.1
NPLOC4-210ENST00000572824 THEMISQ8N1K5 641 aaPredicted RBP14.42□□□□□ -0.1
NPLOC4-210ENST00000572824 SCAF11Q99590 1463 aaKnown RBP14.42□□□□□ -0.1
NPLOC4-210ENST00000572824 FAM50AQ14320 339 aaKnown RBP14.41□□□□□ -0.1
NPLOC4-210ENST00000572824 IFNL1Q8IU54 200 aa14.41□□□□□ -0.1
NPLOC4-210ENST00000572824 GCC2Q8IWJ2 1684 aa14.41□□□□□ -0.1
NPLOC4-210ENST00000572824 ANKRD30AQ9BXX3 1397 aa14.4□□□□□ -0.1
NPLOC4-210ENST00000572824 HAX1O00165 279 aa14.4□□□□□ -0.1
NPLOC4-210ENST00000572824 HSPA1LP34931 641 aa14.39□□□□□ -0.11
NPLOC4-210ENST00000572824 PDAP1Q13442 181 aaKnown RBP14.39□□□□□ -0.11
NPLOC4-210ENST00000572824 UNC13BO14795 1591 aa14.39□□□□□ -0.11
NPLOC4-210ENST00000572824 ADGRB3O60242 1522 aa14.38□□□□□ -0.11
NPLOC4-210ENST00000572824 BCL11BQ9C0K0 894 aaPredicted RBP14.38□□□□□ -0.11
NPLOC4-210ENST00000572824 E9PCH4 1651 aa14.38□□□□□ -0.11
NPLOC4-210ENST00000572824 TET3O43151 1660 aa14.38□□□□□ -0.11
NPLOC4-210ENST00000572824 MED1Q15648 1581 aaPredicted RBP14.38□□□□□ -0.11
NPLOC4-210ENST00000572824 NOS1P29475 1434 aa14.37□□□□□ -0.11
NPLOC4-210ENST00000572824 STK24Q9Y6E0 443 aa14.36□□□□□ -0.11
NPLOC4-210ENST00000572824 KDM5AP29375 1690 aaKnown RBP14.36□□□□□ -0.11
NPLOC4-210ENST00000572824 ANKRD50Q9ULJ7 1429 aa14.35□□□□□ -0.11
NPLOC4-210ENST00000572824 IDI1Q13907 227 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms