RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 CAMSAP1Q5T5Y3 1602 aa7.43□□□□□ -1.22
LINC01541-202ENST00000568095 CNTLNQ9NXG0 1405 aa7.43□□□□□ -1.22
LINC01541-202ENST00000568095 COL17A1Q9UMD9 1497 aaPredicted RBP7.43□□□□□ -1.22
LINC01541-202ENST00000568095 IRX6P78412 446 aaPredicted RBP7.43□□□□□ -1.22
LINC01541-202ENST00000568095 TRPM2O94759 1503 aa7.43□□□□□ -1.22
LINC01541-202ENST00000568095 PIK3C2BO00750 1634 aa7.43□□□□□ -1.22
LINC01541-202ENST00000568095 AGLP35573 1532 aa7.43□□□□□ -1.22
LINC01541-202ENST00000568095 HIRIP3Q9BW71 556 aaPredicted RBP7.43□□□□□ -1.22
LINC01541-202ENST00000568095 DHX29Q7Z478 1369 aaKnown RBP7.42□□□□□ -1.22
LINC01541-202ENST00000568095 SLC4A2P04920 1241 aa7.42□□□□□ -1.22
LINC01541-202ENST00000568095 NPM1P06748 294 aaKnown RBP eCLIP7.42□□□□□ -1.22
LINC01541-202ENST00000568095 IPO9Q96P70 1041 aaKnown RBP7.42□□□□□ -1.22
LINC01541-202ENST00000568095 A2MP01023 1474 aa7.42□□□□□ -1.22
LINC01541-202ENST00000568095 TONSLQ96HA7 1378 aa7.42□□□□□ -1.22
LINC01541-202ENST00000568095 PTPRTO14522 1441 aa7.41□□□□□ -1.22
LINC01541-202ENST00000568095 SMG6Q86US8 1419 aaKnown RBP7.41□□□□□ -1.22
LINC01541-202ENST00000568095 CLTCL1P53675 1640 aa7.41□□□□□ -1.22
LINC01541-202ENST00000568095 MPHOSPH9Q99550 1183 aa7.41□□□□□ -1.22
LINC01541-202ENST00000568095 C11orf95C9JLR9 678 aaPredicted RBP7.41□□□□□ -1.22
LINC01541-202ENST00000568095 AFAP1Q8N556 730 aa7.41□□□□□ -1.22
LINC01541-202ENST00000568095 SALL2Q9Y467 1007 aaPredicted RBP7.41□□□□□ -1.22
LINC01541-202ENST00000568095 ABCC3O15438 1527 aa7.41□□□□□ -1.22
LINC01541-202ENST00000568095 MROH2AA6NES4 1674 aa7.4□□□□□ -1.22
LINC01541-202ENST00000568095 TSPY4P0CV99 314 aa7.4□□□□□ -1.22
LINC01541-202ENST00000568095 TSPY10P0CW01 314 aa7.4□□□□□ -1.22
LINC01541-202ENST00000568095 YEATS2Q9ULM3 1422 aa7.4□□□□□ -1.22
LINC01541-202ENST00000568095 B4GALNT3Q6L9W6 998 aa7.4□□□□□ -1.23
LINC01541-202ENST00000568095 RNF216Q9NWF9 866 aaPredicted RBP7.4□□□□□ -1.23
LINC01541-202ENST00000568095 SPAG9O60271 1321 aaKnown RBP7.4□□□□□ -1.23
LINC01541-202ENST00000568095 WASHC2CQ9Y4E1 1318 aa7.4□□□□□ -1.23
LINC01541-202ENST00000568095 PKD2Q13563 968 aa7.39□□□□□ -1.23
LINC01541-202ENST00000568095 RNF39Q9H2S5 420 aa7.39□□□□□ -1.23
LINC01541-202ENST00000568095 LAMC1P11047 1609 aa7.39□□□□□ -1.23
LINC01541-202ENST00000568095 UBE2Q2Q8WVN8 375 aa7.38□□□□□ -1.23
LINC01541-202ENST00000568095 PREX1Q8TCU6 1659 aa7.38□□□□□ -1.23
LINC01541-202ENST00000568095 TRPM1Q7Z4N2 1603 aa7.38□□□□□ -1.23
LINC01541-202ENST00000568095 SYNMO15061 1565 aa7.38□□□□□ -1.23
LINC01541-202ENST00000568095 UHRF1BP1Q6BDS2 1440 aa7.38□□□□□ -1.23
LINC01541-202ENST00000568095 CCDC184Q52MB2 194 aa7.38□□□□□ -1.23
LINC01541-202ENST00000568095 USP35Q9P2H5 1018 aa7.38□□□□□ -1.23
LINC01541-202ENST00000568095 PRKRIP1Q9H875 184 aaPredicted RBP7.37□□□□□ -1.23
LINC01541-202ENST00000568095 NUP155O75694 1391 aa7.37□□□□□ -1.23
LINC01541-202ENST00000568095 KIF1BO60333 1816 aa7.37□□□□□ -1.23
LINC01541-202ENST00000568095 FAM69CQ0P6D2 419 aa7.36□□□□□ -1.23
LINC01541-202ENST00000568095 SPATA31E1Q6ZUB1 1445 aa7.36□□□□□ -1.23
LINC01541-202ENST00000568095 ADGRB3O60242 1522 aa7.36□□□□□ -1.23
LINC01541-202ENST00000568095 VASPP50552 380 aaPredicted RBP7.36□□□□□ -1.23
LINC01541-202ENST00000568095 MADDQ8WXG6 1647 aa7.36□□□□□ -1.23
LINC01541-202ENST00000568095 ARHGAP31Q2M1Z3 1444 aa7.36□□□□□ -1.23
LINC01541-202ENST00000568095 PPLO60437 1756 aa7.36□□□□□ -1.23
LINC01541-202ENST00000568095 KIAA1210Q9ULL0 1709 aa7.36□□□□□ -1.23
LINC01541-202ENST00000568095 HSPA5P11021 654 aaKnown RBP7.36□□□□□ -1.23
LINC01541-202ENST00000568095 IL27Q8NEV9 243 aa7.36□□□□□ -1.23
LINC01541-202ENST00000568095 CCDC7Q96M83 1385 aa7.35□□□□□ -1.23
LINC01541-202ENST00000568095 ANP32AP39687 249 aaKnown RBP7.35□□□□□ -1.23
LINC01541-202ENST00000568095 CLTCQ00610 1675 aaKnown RBP7.35□□□□□ -1.23
LINC01541-202ENST00000568095 ZBTB47Q9UFB7 747 aaPredicted RBP7.34□□□□□ -1.23
LINC01541-202ENST00000568095 MYO5BQ9ULV0 1848 aa7.34□□□□□ -1.23
LINC01541-202ENST00000568095 NOS1P29475 1434 aa7.34□□□□□ -1.23
LINC01541-202ENST00000568095 NPATQ14207 1427 aa7.34□□□□□ -1.23
LINC01541-202ENST00000568095 RAPGEF3O95398 923 aa7.34□□□□□ -1.24
LINC01541-202ENST00000568095 RTL5Q5HYW3 569 aaPredicted RBP7.34□□□□□ -1.24
LINC01541-202ENST00000568095 NRXN1Q9ULB1 1477 aa7.34□□□□□ -1.24
LINC01541-202ENST00000568095 KDM5AP29375 1690 aaKnown RBP7.34□□□□□ -1.24
LINC01541-202ENST00000568095 IQGAP1P46940 1657 aa7.33□□□□□ -1.24
LINC01541-202ENST00000568095 SPATA31D1Q6ZQQ2 1576 aa7.33□□□□□ -1.24
LINC01541-202ENST00000568095 UGGT1Q9NYU2 1555 aa7.33□□□□□ -1.24
LINC01541-202ENST00000568095 RALGAPBQ86X10 1494 aa7.33□□□□□ -1.24
LINC01541-202ENST00000568095 SPRYD3Q8NCJ5 442 aa7.33□□□□□ -1.24
LINC01541-202ENST00000568095 CCDC136Q96JN2 1154 aa7.33□□□□□ -1.24
LINC01541-202ENST00000568095 NUDCQ9Y266 331 aa7.32□□□□□ -1.24
LINC01541-202ENST00000568095 TMEM131LA2VDJ0 1609 aa7.32□□□□□ -1.24
LINC01541-202ENST00000568095 IFNLR1Q8IU57 520 aaPredicted RBP7.32□□□□□ -1.24
LINC01541-202ENST00000568095 EIF4G2P78344 907 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC01541-202ENST00000568095 MYOM2P54296 1465 aa7.31□□□□□ -1.24
LINC01541-202ENST00000568095 SETD1AO15047 1707 aaKnown RBP7.31□□□□□ -1.24
LINC01541-202ENST00000568095 PRAG1Q86YV5 1406 aa7.3□□□□□ -1.24
LINC01541-202ENST00000568095 MRS2Q9HD23 443 aa7.3□□□□□ -1.24
LINC01541-202ENST00000568095 FER1L4A9Z1Z3 1794 aa7.29□□□□□ -1.24
LINC01541-202ENST00000568095 NEXMIFQ5QGS0 1516 aa7.29□□□□□ -1.24
LINC01541-202ENST00000568095 MYO3AQ8NEV4 1616 aa7.29□□□□□ -1.24
LINC01541-202ENST00000568095 CFAP65Q6ZU64 1925 aaKnown RBP7.29□□□□□ -1.24
LINC01541-202ENST00000568095 CCDC144AA2RUR9 1427 aa7.29□□□□□ -1.24
LINC01541-202ENST00000568095 NPM2Q86SE8 214 aaKnown RBP7.29□□□□□ -1.24
LINC01541-202ENST00000568095 C3P01024 1663 aa7.29□□□□□ -1.24
LINC01541-202ENST00000568095 TCERG1O14776 1098 aaKnown RBP7.28□□□□□ -1.24
LINC01541-202ENST00000568095 MS4A1P11836 297 aa7.28□□□□□ -1.24
LINC01541-202ENST00000568095 GPRASP1Q5JY77 1395 aa7.28□□□□□ -1.24
LINC01541-202ENST00000568095 ERVK-7P63135 1459 aa7.28□□□□□ -1.24
LINC01541-202ENST00000568095 FAM9BQ8IZU0 186 aa7.28□□□□□ -1.24
LINC01541-202ENST00000568095 L3MBTL2Q969R5 705 aa7.28□□□□□ -1.24
LINC01541-202ENST00000568095 ADAMTSL3P82987 1691 aa7.28□□□□□ -1.24
LINC01541-202ENST00000568095 KANK1Q14678 1352 aa7.28□□□□□ -1.24
LINC01541-202ENST00000568095 PPM1GO15355 546 aaPredicted RBP7.27□□□□□ -1.24
LINC01541-202ENST00000568095 KIF7Q2M1P5 1343 aa7.27□□□□□ -1.25
LINC01541-202ENST00000568095 BACH2Q9BYV9 841 aa7.27□□□□□ -1.25
LINC01541-202ENST00000568095 SETBP1Q9Y6X0 1596 aa7.27□□□□□ -1.25
LINC01541-202ENST00000568095 LRPPRCP42704 1394 aaKnown RBP7.27□□□□□ -1.25
LINC01541-202ENST00000568095 KIF3BO15066 747 aa7.27□□□□□ -1.25
LINC01541-202ENST00000568095 NBPF8Q3BBV2 869 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms