RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 STAG3Q9UJ98 1225 aa18.42■□□□□ 0.54
RNF40-211ENST00000567365 KIF1BO60333 1816 aa18.42■□□□□ 0.54
RNF40-211ENST00000567365 TXNDC2Q86VQ3 553 aa18.41■□□□□ 0.54
RNF40-211ENST00000567365 RIMS2Q9UQ26 1411 aa18.4■□□□□ 0.54
RNF40-211ENST00000567365 ANKRD30BQ9BXX2 1392 aa18.4■□□□□ 0.54
RNF40-211ENST00000567365 SPATA31E1Q6ZUB1 1445 aa18.39■□□□□ 0.53
RNF40-211ENST00000567365 ZNF335Q9H4Z2 1342 aaPredicted RBP18.38■□□□□ 0.53
RNF40-211ENST00000567365 NEXMIFQ5QGS0 1516 aa18.38■□□□□ 0.53
RNF40-211ENST00000567365 EID1Q9Y6B2 187 aa18.37■□□□□ 0.53
RNF40-211ENST00000567365 CCDC144AA2RUR9 1427 aa18.37■□□□□ 0.53
RNF40-211ENST00000567365 PLEKHG1Q9ULL1 1385 aa18.35■□□□□ 0.53
RNF40-211ENST00000567365 CHGAP10645 457 aaKnown RBP18.35■□□□□ 0.53
RNF40-211ENST00000567365 SOCS7O14512 581 aa18.34■□□□□ 0.53
RNF40-211ENST00000567365 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.32■□□□□ 0.52
RNF40-211ENST00000567365 STRCP1A6NGW2 1772 aa18.32■□□□□ 0.52
RNF40-211ENST00000567365 IQSEC2Q5JU85 1478 aa18.32■□□□□ 0.52
RNF40-211ENST00000567365 IFT172Q9UG01 1749 aa18.32■□□□□ 0.52
RNF40-211ENST00000567365 ADAMTS13Q76LX8 1427 aa18.32■□□□□ 0.52
RNF40-211ENST00000567365 NRXN3Q9Y4C0 1643 aa18.31■□□□□ 0.52
RNF40-211ENST00000567365 PPLO60437 1756 aa18.31■□□□□ 0.52
RNF40-211ENST00000567365 SETBP1Q9Y6X0 1596 aa18.3■□□□□ 0.52
RNF40-211ENST00000567365 HDGFP51858 240 aaKnown RBP18.3■□□□□ 0.52
RNF40-211ENST00000567365 RPGRIP1LQ68CZ1 1315 aa18.29■□□□□ 0.52
RNF40-211ENST00000567365 DIP2AQ14689 1571 aa18.27■□□□□ 0.52
RNF40-211ENST00000567365 UBAP1LF5GYI3 381 aa18.27■□□□□ 0.52
RNF40-211ENST00000567365 NUTM2DQ5VT03 806 aaPredicted RBP18.27■□□□□ 0.52
RNF40-211ENST00000567365 DHX57Q6P158 1386 aaKnown RBP18.27■□□□□ 0.51
RNF40-211ENST00000567365 ZNF326Q5BKZ1 582 aaKnown RBP18.26■□□□□ 0.51
RNF40-211ENST00000567365 NWD1Q149M9 1564 aa18.25■□□□□ 0.51
RNF40-211ENST00000567365 CPS1P31327 1500 aa18.25■□□□□ 0.51
RNF40-211ENST00000567365 SLC26A8Q96RN1 970 aa18.25■□□□□ 0.51
RNF40-211ENST00000567365 TBX22Q9Y458 520 aa18.25■□□□□ 0.51
RNF40-211ENST00000567365 SETD1AO15047 1707 aaKnown RBP18.24■□□□□ 0.51
RNF40-211ENST00000567365 CHD2O14647 1828 aaKnown RBP18.24■□□□□ 0.51
RNF40-211ENST00000567365 PPP1R15AO75807 674 aaPredicted RBP18.24■□□□□ 0.51
RNF40-211ENST00000567365 VGFO15240 615 aaPredicted RBP18.22■□□□□ 0.51
RNF40-211ENST00000567365 NRXN1Q9ULB1 1477 aa18.21■□□□□ 0.51
RNF40-211ENST00000567365 PIK3R4Q99570 1358 aa18.21■□□□□ 0.51
RNF40-211ENST00000567365 RGL3Q3MIN7 710 aa18.21■□□□□ 0.51
RNF40-211ENST00000567365 LRRC7Q96NW7 1537 aa18.2■□□□□ 0.5
RNF40-211ENST00000567365 MYOM2P54296 1465 aa18.2■□□□□ 0.5
RNF40-211ENST00000567365 KCNA6P17658 529 aa18.19■□□□□ 0.5
RNF40-211ENST00000567365 ADGRF5Q8IZF2 1346 aa18.19■□□□□ 0.5
RNF40-211ENST00000567365 PIK3C2GO75747 1445 aa18.18■□□□□ 0.5
RNF40-211ENST00000567365 PTPRUQ92729 1446 aa18.18■□□□□ 0.5
RNF40-211ENST00000567365 ALKQ9UM73 1620 aa18.18■□□□□ 0.5
RNF40-211ENST00000567365 NKTRP30414 1462 aaKnown RBP18.18■□□□□ 0.5
RNF40-211ENST00000567365 XIRP1Q702N8 1843 aaKnown RBP18.18■□□□□ 0.5
RNF40-211ENST00000567365 XRN1Q8IZH2 1706 aaKnown RBP18.18■□□□□ 0.5
RNF40-211ENST00000567365 PCGF6Q9BYE7 350 aa18.17■□□□□ 0.5
RNF40-211ENST00000567365 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
RNF40-211ENST00000567365 METP08581 1390 aa18.17■□□□□ 0.5
RNF40-211ENST00000567365 BCANQ96GW7 911 aa18.15■□□□□ 0.5
RNF40-211ENST00000567365 PRAG1Q86YV5 1406 aa18.15■□□□□ 0.5
RNF40-211ENST00000567365 HSPA1LP34931 641 aa18.14■□□□□ 0.49
RNF40-211ENST00000567365 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
RNF40-211ENST00000567365 PIP4K2BP78356 416 aa18.13■□□□□ 0.49
RNF40-211ENST00000567365 STAC3Q96MF2 364 aa18.11■□□□□ 0.49
RNF40-211ENST00000567365 SIN3AQ96ST3 1273 aa18.11■□□□□ 0.49
RNF40-211ENST00000567365 SCAF1Q9H7N4 1312 aaKnown RBP18.1■□□□□ 0.49
RNF40-211ENST00000567365 LAMC1P11047 1609 aa18.09■□□□□ 0.49
RNF40-211ENST00000567365 TMEM94Q12767 1356 aa18.09■□□□□ 0.49
RNF40-211ENST00000567365 C14orf93Q9H972 538 aaKnown RBP18.09■□□□□ 0.49
RNF40-211ENST00000567365 AMOTL2Q9Y2J4 779 aa18.09■□□□□ 0.49
RNF40-211ENST00000567365 NCOA3Q9Y6Q9 1424 aa18.06■□□□□ 0.48
RNF40-211ENST00000567365 TOM1O60784 492 aa18.06■□□□□ 0.48
RNF40-211ENST00000567365 DCAF11Q8TEB1 546 aa18.06■□□□□ 0.48
RNF40-211ENST00000567365 TECPR2O15040 1411 aa18.06■□□□□ 0.48
RNF40-211ENST00000567365 PTCH1Q13635 1447 aa18.06■□□□□ 0.48
RNF40-211ENST00000567365 ADGRB1O14514 1584 aa18.05■□□□□ 0.48
RNF40-211ENST00000567365 PROSER2Q86WR7 435 aaPredicted RBP18.05■□□□□ 0.48
RNF40-211ENST00000567365 KNDC1Q76NI1 1749 aa18.04■□□□□ 0.48
RNF40-211ENST00000567365 CFAP70Q5T0N1 1121 aa18.04■□□□□ 0.48
RNF40-211ENST00000567365 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
RNF40-211ENST00000567365 L3MBTL2Q969R5 705 aa18.03■□□□□ 0.48
RNF40-211ENST00000567365 ABCC11Q96J66 1382 aa18.03■□□□□ 0.48
RNF40-211ENST00000567365 ROBO2Q9HCK4 1378 aa18.03■□□□□ 0.48
RNF40-211ENST00000567365 RBM33Q96EV2 1170 aaKnown RBP18.02■□□□□ 0.48
RNF40-211ENST00000567365 KIAA1210Q9ULL0 1709 aa18.02■□□□□ 0.48
RNF40-211ENST00000567365 YTHDC2Q9H6S0 1430 aaKnown RBP18.01■□□□□ 0.47
RNF40-211ENST00000567365 TMEM132EQ6IEE7 984 aa18.01■□□□□ 0.47
RNF40-211ENST00000567365 KDM2AQ9Y2K7 1162 aa18.01■□□□□ 0.47
RNF40-211ENST00000567365 MED1Q15648 1581 aaPredicted RBP18■□□□□ 0.47
RNF40-211ENST00000567365 CLSPNQ9HAW4 1339 aa17.99■□□□□ 0.47
RNF40-211ENST00000567365 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.99■□□□□ 0.47
RNF40-211ENST00000567365 NEUROD1Q13562 356 aa17.99■□□□□ 0.47
RNF40-211ENST00000567365 NALCNQ8IZF0 1738 aa17.98■□□□□ 0.47
RNF40-211ENST00000567365 ADGRL3Q9HAR2 1447 aa17.97■□□□□ 0.47
RNF40-211ENST00000567365 SIRT1Q96EB6 747 aa17.96■□□□□ 0.47
RNF40-211ENST00000567365 DLC1Q96QB1 1528 aa17.96■□□□□ 0.47
RNF40-211ENST00000567365 DCCP43146 1447 aa17.96■□□□□ 0.47
RNF40-211ENST00000567365 FAM135BQ49AJ0 1406 aa17.96■□□□□ 0.47
RNF40-211ENST00000567365 MSH6P52701 1360 aa17.95■□□□□ 0.46
RNF40-211ENST00000567365 C19orf44Q9H6X5 657 aa17.95■□□□□ 0.46
RNF40-211ENST00000567365 TRPM1Q7Z4N2 1603 aa17.94■□□□□ 0.46
RNF40-211ENST00000567365 PLEKHH1Q9ULM0 1364 aa17.92■□□□□ 0.46
RNF40-211ENST00000567365 STK26Q9P289 416 aa17.92■□□□□ 0.46
RNF40-211ENST00000567365 ARHGEF28Q8N1W1 1705 aaKnown RBP17.9■□□□□ 0.46
RNF40-211ENST00000567365 NBPF1Q3BBV0 1214 aa17.9■□□□□ 0.46
RNF40-211ENST00000567365 NBPF8Q3BBV2 869 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms