RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 RIMS2Q9UQ26 1411 aa23.17■■□□□ 1.3
COMMD4-217ENST00000567195 ZNF335Q9H4Z2 1342 aaPredicted RBP23.17■■□□□ 1.3
COMMD4-217ENST00000567195 PPP1R15AO75807 674 aaPredicted RBP23.17■■□□□ 1.3
COMMD4-217ENST00000567195 IQSEC2Q5JU85 1478 aa23.16■■□□□ 1.3
COMMD4-217ENST00000567195 CLTCL1P53675 1640 aa23.15■■□□□ 1.3
COMMD4-217ENST00000567195 ZNF326Q5BKZ1 582 aaKnown RBP23.15■■□□□ 1.3
COMMD4-217ENST00000567195 BCANQ96GW7 911 aa23.15■■□□□ 1.3
COMMD4-217ENST00000567195 LTBP4Q8N2S1 1624 aa23.15■■□□□ 1.3
COMMD4-217ENST00000567195 ZFYVE9O95405 1425 aa23.14■■□□□ 1.29
COMMD4-217ENST00000567195 KIF1BO60333 1816 aa23.11■■□□□ 1.29
COMMD4-217ENST00000567195 CCDC144AA2RUR9 1427 aa23.1■■□□□ 1.29
COMMD4-217ENST00000567195 CPS1P31327 1500 aa23.1■■□□□ 1.29
COMMD4-217ENST00000567195 TRIM26Q12899 539 aaPredicted RBP23.1■■□□□ 1.29
COMMD4-217ENST00000567195 NUTM2DQ5VT03 806 aaPredicted RBP23.09■■□□□ 1.29
COMMD4-217ENST00000567195 PLEKHG1Q9ULL1 1385 aa23.09■■□□□ 1.29
COMMD4-217ENST00000567195 SLC26A8Q96RN1 970 aa23.07■■□□□ 1.28
COMMD4-217ENST00000567195 SENP3Q9H4L4 574 aaPredicted RBP23.06■■□□□ 1.28
COMMD4-217ENST00000567195 RPGRIP1LQ68CZ1 1315 aa23.03■■□□□ 1.28
COMMD4-217ENST00000567195 VGFO15240 615 aaPredicted RBP23■■□□□ 1.27
COMMD4-217ENST00000567195 TBX22Q9Y458 520 aa23■■□□□ 1.27
COMMD4-217ENST00000567195 NEXMIFQ5QGS0 1516 aa22.99■■□□□ 1.27
COMMD4-217ENST00000567195 RGL3Q3MIN7 710 aa22.99■■□□□ 1.27
COMMD4-217ENST00000567195 KCNA6P17658 529 aa22.97■■□□□ 1.27
COMMD4-217ENST00000567195 ANKRD30BQ9BXX2 1392 aa22.97■■□□□ 1.27
COMMD4-217ENST00000567195 UBAP1LF5GYI3 381 aa22.96■■□□□ 1.27
COMMD4-217ENST00000567195 DIP2AQ14689 1571 aa22.95■■□□□ 1.26
COMMD4-217ENST00000567195 ADAMTS13Q76LX8 1427 aa22.95■■□□□ 1.26
COMMD4-217ENST00000567195 STRCP1A6NGW2 1772 aa22.94■■□□□ 1.26
COMMD4-217ENST00000567195 SPATA31E1Q6ZUB1 1445 aa22.94■■□□□ 1.26
COMMD4-217ENST00000567195 TOM1O60784 492 aa22.94■■□□□ 1.26
COMMD4-217ENST00000567195 SETBP1Q9Y6X0 1596 aa22.92■■□□□ 1.26
COMMD4-217ENST00000567195 PIK3R4Q99570 1358 aa22.91■■□□□ 1.26
COMMD4-217ENST00000567195 LRRC7Q96NW7 1537 aa22.91■■□□□ 1.26
COMMD4-217ENST00000567195 PPLO60437 1756 aa22.9■■□□□ 1.26
COMMD4-217ENST00000567195 PROSER2Q86WR7 435 aaPredicted RBP22.89■■□□□ 1.25
COMMD4-217ENST00000567195 NWD1Q149M9 1564 aa22.88■■□□□ 1.25
COMMD4-217ENST00000567195 CHD2O14647 1828 aaKnown RBP22.87■■□□□ 1.25
COMMD4-217ENST00000567195 NRXN3Q9Y4C0 1643 aa22.87■■□□□ 1.25
COMMD4-217ENST00000567195 NKTRP30414 1462 aaKnown RBP22.86■■□□□ 1.25
COMMD4-217ENST00000567195 ADGRF5Q8IZF2 1346 aa22.84■■□□□ 1.25
COMMD4-217ENST00000567195 AMOTL2Q9Y2J4 779 aa22.84■■□□□ 1.25
COMMD4-217ENST00000567195 SCAF1Q9H7N4 1312 aaKnown RBP22.83■■□□□ 1.25
COMMD4-217ENST00000567195 TMEM94Q12767 1356 aa22.83■■□□□ 1.25
COMMD4-217ENST00000567195 IFT172Q9UG01 1749 aa22.82■■□□□ 1.24
COMMD4-217ENST00000567195 METP08581 1390 aa22.82■■□□□ 1.24
COMMD4-217ENST00000567195 PTPRUQ92729 1446 aa22.81■■□□□ 1.24
COMMD4-217ENST00000567195 ALKQ9UM73 1620 aa22.8■■□□□ 1.24
COMMD4-217ENST00000567195 PIP4K2BP78356 416 aa22.79■■□□□ 1.24
COMMD4-217ENST00000567195 RBM33Q96EV2 1170 aaKnown RBP22.79■■□□□ 1.24
COMMD4-217ENST00000567195 STAC3Q96MF2 364 aa22.78■■□□□ 1.24
COMMD4-217ENST00000567195 DCAF11Q8TEB1 546 aa22.77■■□□□ 1.24
COMMD4-217ENST00000567195 MYOM2P54296 1465 aa22.77■■□□□ 1.24
COMMD4-217ENST00000567195 XIRP1Q702N8 1843 aaKnown RBP22.77■■□□□ 1.24
COMMD4-217ENST00000567195 C14orf37Q86TY3 774 aa22.76■■□□□ 1.23
COMMD4-217ENST00000567195 KDM2AQ9Y2K7 1162 aa22.76■■□□□ 1.23
COMMD4-217ENST00000567195 DHX57Q6P158 1386 aaKnown RBP22.76■■□□□ 1.23
COMMD4-217ENST00000567195 PIK3C2GO75747 1445 aa22.75■■□□□ 1.23
COMMD4-217ENST00000567195 NCOA3Q9Y6Q9 1424 aa22.75■■□□□ 1.23
COMMD4-217ENST00000567195 MSH6P52701 1360 aa22.75■■□□□ 1.23
COMMD4-217ENST00000567195 SETD1AO15047 1707 aaKnown RBP22.74■■□□□ 1.23
COMMD4-217ENST00000567195 XRN1Q8IZH2 1706 aaKnown RBP22.74■■□□□ 1.23
COMMD4-217ENST00000567195 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
COMMD4-217ENST00000567195 NRXN1Q9ULB1 1477 aa22.72■■□□□ 1.23
COMMD4-217ENST00000567195 C14orf93Q9H972 538 aaKnown RBP22.71■■□□□ 1.23
COMMD4-217ENST00000567195 SIN3AQ96ST3 1273 aa22.69■■□□□ 1.22
COMMD4-217ENST00000567195 NEUROD1Q13562 356 aa22.68■■□□□ 1.22
COMMD4-217ENST00000567195 CFAP70Q5T0N1 1121 aa22.68■■□□□ 1.22
COMMD4-217ENST00000567195 TMEM132EQ6IEE7 984 aa22.68■■□□□ 1.22
COMMD4-217ENST00000567195 C19orf44Q9H6X5 657 aa22.68■■□□□ 1.22
COMMD4-217ENST00000567195 STK26Q9P289 416 aa22.67■■□□□ 1.22
COMMD4-217ENST00000567195 PTCH1Q13635 1447 aa22.66■■□□□ 1.22
COMMD4-217ENST00000567195 ATF3P18847 181 aa22.66■■□□□ 1.22
COMMD4-217ENST00000567195 LAMC1P11047 1609 aa22.66■■□□□ 1.22
COMMD4-217ENST00000567195 LRPPRCP42704 1394 aaKnown RBP22.64■■□□□ 1.22
COMMD4-217ENST00000567195 CADPS2Q86UW7 1296 aa22.64■■□□□ 1.21
COMMD4-217ENST00000567195 PRAG1Q86YV5 1406 aa22.64■■□□□ 1.21
COMMD4-217ENST00000567195 ROBO2Q9HCK4 1378 aa22.63■■□□□ 1.21
COMMD4-217ENST00000567195 YTHDC2Q9H6S0 1430 aaKnown RBP22.62■■□□□ 1.21
COMMD4-217ENST00000567195 ABCC11Q96J66 1382 aa22.62■■□□□ 1.21
COMMD4-217ENST00000567195 ASXL1Q8IXJ9 1541 aa22.62■■□□□ 1.21
COMMD4-217ENST00000567195 HSPA1LP34931 641 aa22.61■■□□□ 1.21
COMMD4-217ENST00000567195 SLAIN2Q9P270 581 aa22.61■■□□□ 1.21
COMMD4-217ENST00000567195 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.61■■□□□ 1.21
COMMD4-217ENST00000567195 FAM135BQ49AJ0 1406 aa22.6■■□□□ 1.21
COMMD4-217ENST00000567195 TECPR2O15040 1411 aa22.59■■□□□ 1.21
COMMD4-217ENST00000567195 DCCP43146 1447 aa22.59■■□□□ 1.21
COMMD4-217ENST00000567195 ADGRL3Q9HAR2 1447 aa22.59■■□□□ 1.21
COMMD4-217ENST00000567195 L3MBTL2Q969R5 705 aa22.59■■□□□ 1.21
COMMD4-217ENST00000567195 SIRT1Q96EB6 747 aa22.57■■□□□ 1.2
COMMD4-217ENST00000567195 KNDC1Q76NI1 1749 aa22.57■■□□□ 1.2
COMMD4-217ENST00000567195 WAPLQ7Z5K2 1190 aa22.56■■□□□ 1.2
COMMD4-217ENST00000567195 NALCNQ8IZF0 1738 aa22.54■■□□□ 1.2
COMMD4-217ENST00000567195 ROBO1Q9Y6N7 1651 aa22.53■■□□□ 1.2
COMMD4-217ENST00000567195 ADGRB1O14514 1584 aa22.53■■□□□ 1.2
COMMD4-217ENST00000567195 TRAK1Q9UPV9 953 aa22.52■■□□□ 1.2
COMMD4-217ENST00000567195 TONSLQ96HA7 1378 aa22.51■■□□□ 1.19
COMMD4-217ENST00000567195 POGKQ9P215 609 aa22.51■■□□□ 1.19
COMMD4-217ENST00000567195 PRAM1Q96QH2 718 aa22.5■■□□□ 1.19
COMMD4-217ENST00000567195 PLEKHH1Q9ULM0 1364 aa22.5■■□□□ 1.19
COMMD4-217ENST00000567195 KIAA1210Q9ULL0 1709 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms