RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 PPP1R15AO75807 674 aaPredicted RBP27.83■■■□□ 2.05
CMTM3-210ENST00000565666 ZFYVE9O95405 1425 aa27.83■■■□□ 2.05
CMTM3-210ENST00000565666 BCANQ96GW7 911 aa27.81■■■□□ 2.04
CMTM3-210ENST00000565666 CPS1P31327 1500 aa27.81■■■□□ 2.04
CMTM3-210ENST00000565666 MPHOSPH9Q99550 1183 aa27.8■■■□□ 2.04
CMTM3-210ENST00000565666 IQSEC2Q5JU85 1478 aa27.8■■■□□ 2.04
CMTM3-210ENST00000565666 KIF1BO60333 1816 aa27.8■■■□□ 2.04
CMTM3-210ENST00000565666 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.79■■■□□ 2.04
CMTM3-210ENST00000565666 FOXD1Q16676 465 aa27.78■■■□□ 2.04
CMTM3-210ENST00000565666 ZNF326Q5BKZ1 582 aaKnown RBP27.77■■■□□ 2.04
CMTM3-210ENST00000565666 SENP3Q9H4L4 574 aaPredicted RBP27.76■■■□□ 2.03
CMTM3-210ENST00000565666 NUTM2DQ5VT03 806 aaPredicted RBP27.75■■■□□ 2.03
CMTM3-210ENST00000565666 PLEKHG1Q9ULL1 1385 aa27.74■■■□□ 2.03
CMTM3-210ENST00000565666 STRCP1A6NGW2 1772 aa27.74■■■□□ 2.03
CMTM3-210ENST00000565666 SLC26A8Q96RN1 970 aa27.74■■■□□ 2.03
CMTM3-210ENST00000565666 CCDC144AA2RUR9 1427 aa27.67■■■□□ 2.02
CMTM3-210ENST00000565666 NEXMIFQ5QGS0 1516 aa27.65■■■□□ 2.02
CMTM3-210ENST00000565666 HRCP23327 699 aa27.64■■■□□ 2.02
CMTM3-210ENST00000565666 LRRC7Q96NW7 1537 aa27.63■■■□□ 2.01
CMTM3-210ENST00000565666 DIP2AQ14689 1571 aa27.63■■■□□ 2.01
CMTM3-210ENST00000565666 UBAP1LF5GYI3 381 aa27.62■■■□□ 2.01
CMTM3-210ENST00000565666 KCNA6P17658 529 aa27.61■■■□□ 2.01
CMTM3-210ENST00000565666 ADAMTS13Q76LX8 1427 aa27.6■■■□□ 2.01
CMTM3-210ENST00000565666 TBX22Q9Y458 520 aa27.6■■■□□ 2.01
CMTM3-210ENST00000565666 NWD1Q149M9 1564 aa27.59■■■□□ 2.01
CMTM3-210ENST00000565666 CHD2O14647 1828 aaKnown RBP27.58■■■□□ 2.01
CMTM3-210ENST00000565666 SETBP1Q9Y6X0 1596 aa27.56■■■□□ 2
CMTM3-210ENST00000565666 PPLO60437 1756 aa27.56■■■□□ 2
CMTM3-210ENST00000565666 RPGRIP1LQ68CZ1 1315 aa27.56■■■□□ 2
CMTM3-210ENST00000565666 NRXN3Q9Y4C0 1643 aa27.56■■■□□ 2
CMTM3-210ENST00000565666 NKTRP30414 1462 aaKnown RBP27.55■■■□□ 2
CMTM3-210ENST00000565666 VGFO15240 615 aaPredicted RBP27.54■■■□□ 2
CMTM3-210ENST00000565666 XIRP1Q702N8 1843 aaKnown RBP27.53■■■□□ 2
CMTM3-210ENST00000565666 RGL3Q3MIN7 710 aa27.53■■■□□ 2
CMTM3-210ENST00000565666 PROSER2Q86WR7 435 aaPredicted RBP27.53■■■□□ 2
CMTM3-210ENST00000565666 TOM1O60784 492 aa27.52■■■□□ 2
CMTM3-210ENST00000565666 SPATA31E1Q6ZUB1 1445 aa27.51■■□□□ 1.99
CMTM3-210ENST00000565666 PIK3R4Q99570 1358 aa27.51■■□□□ 1.99
CMTM3-210ENST00000565666 TMEM94Q12767 1356 aa27.49■■□□□ 1.99
CMTM3-210ENST00000565666 SCAF1Q9H7N4 1312 aaKnown RBP27.49■■□□□ 1.99
CMTM3-210ENST00000565666 IFT172Q9UG01 1749 aa27.47■■□□□ 1.99
CMTM3-210ENST00000565666 ANKRD30BQ9BXX2 1392 aa27.47■■□□□ 1.99
CMTM3-210ENST00000565666 PIP4K2BP78356 416 aa27.46■■□□□ 1.99
CMTM3-210ENST00000565666 RBM33Q96EV2 1170 aaKnown RBP27.46■■□□□ 1.99
CMTM3-210ENST00000565666 PTPRUQ92729 1446 aa27.43■■□□□ 1.98
CMTM3-210ENST00000565666 AMOTL2Q9Y2J4 779 aa27.43■■□□□ 1.98
CMTM3-210ENST00000565666 METP08581 1390 aa27.42■■□□□ 1.98
CMTM3-210ENST00000565666 XRN1Q8IZH2 1706 aaKnown RBP27.41■■□□□ 1.98
CMTM3-210ENST00000565666 ALKQ9UM73 1620 aa27.41■■□□□ 1.98
CMTM3-210ENST00000565666 TRIM26Q12899 539 aaPredicted RBP27.4■■□□□ 1.98
CMTM3-210ENST00000565666 SETD1AO15047 1707 aaKnown RBP27.39■■□□□ 1.98
CMTM3-210ENST00000565666 ADGRF5Q8IZF2 1346 aa27.39■■□□□ 1.97
CMTM3-210ENST00000565666 MSH6P52701 1360 aa27.38■■□□□ 1.97
CMTM3-210ENST00000565666 C14orf37Q86TY3 774 aa27.38■■□□□ 1.97
CMTM3-210ENST00000565666 NCOA3Q9Y6Q9 1424 aa27.34■■□□□ 1.97
CMTM3-210ENST00000565666 PIK3C2GO75747 1445 aa27.31■■□□□ 1.96
CMTM3-210ENST00000565666 MYOM2P54296 1465 aa27.31■■□□□ 1.96
CMTM3-210ENST00000565666 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.27■■□□□ 1.96
CMTM3-210ENST00000565666 HSPA1LP34931 641 aa27.26■■□□□ 1.95
CMTM3-210ENST00000565666 C19orf44Q9H6X5 657 aa27.25■■□□□ 1.95
CMTM3-210ENST00000565666 NRXN1Q9ULB1 1477 aa27.25■■□□□ 1.95
CMTM3-210ENST00000565666 LAMC1P11047 1609 aa27.24■■□□□ 1.95
CMTM3-210ENST00000565666 DCAF11Q8TEB1 546 aa27.24■■□□□ 1.95
CMTM3-210ENST00000565666 PTCH1Q13635 1447 aa27.24■■□□□ 1.95
CMTM3-210ENST00000565666 ATF3P18847 181 aa27.23■■□□□ 1.95
CMTM3-210ENST00000565666 KDM2AQ9Y2K7 1162 aa27.23■■□□□ 1.95
CMTM3-210ENST00000565666 ROBO1Q9Y6N7 1651 aa27.21■■□□□ 1.95
CMTM3-210ENST00000565666 CADPS2Q86UW7 1296 aa27.21■■□□□ 1.95
CMTM3-210ENST00000565666 ASXL1Q8IXJ9 1541 aa27.21■■□□□ 1.95
CMTM3-210ENST00000565666 FAM135BQ49AJ0 1406 aa27.2■■□□□ 1.94
CMTM3-210ENST00000565666 PRAG1Q86YV5 1406 aa27.2■■□□□ 1.94
CMTM3-210ENST00000565666 NALCNQ8IZF0 1738 aa27.2■■□□□ 1.94
CMTM3-210ENST00000565666 SLAIN2Q9P270 581 aa27.2■■□□□ 1.94
CMTM3-210ENST00000565666 STK26Q9P289 416 aa27.2■■□□□ 1.94
CMTM3-210ENST00000565666 ROBO2Q9HCK4 1378 aa27.2■■□□□ 1.94
CMTM3-210ENST00000565666 TMEM132EQ6IEE7 984 aa27.19■■□□□ 1.94
CMTM3-210ENST00000565666 C14orf93Q9H972 538 aaKnown RBP27.19■■□□□ 1.94
CMTM3-210ENST00000565666 DCCP43146 1447 aa27.18■■□□□ 1.94
CMTM3-210ENST00000565666 ADGRL3Q9HAR2 1447 aa27.18■■□□□ 1.94
CMTM3-210ENST00000565666 CFAP70Q5T0N1 1121 aa27.18■■□□□ 1.94
CMTM3-210ENST00000565666 KNDC1Q76NI1 1749 aa27.17■■□□□ 1.94
CMTM3-210ENST00000565666 STAC3Q96MF2 364 aa27.17■■□□□ 1.94
CMTM3-210ENST00000565666 LRPPRCP42704 1394 aaKnown RBP27.17■■□□□ 1.94
CMTM3-210ENST00000565666 DHX57Q6P158 1386 aaKnown RBP27.17■■□□□ 1.94
CMTM3-210ENST00000565666 YTHDC2Q9H6S0 1430 aaKnown RBP27.15■■□□□ 1.94
CMTM3-210ENST00000565666 TECPR2O15040 1411 aa27.13■■□□□ 1.93
CMTM3-210ENST00000565666 ABCC11Q96J66 1382 aa27.12■■□□□ 1.93
CMTM3-210ENST00000565666 SIN3AQ96ST3 1273 aa27.09■■□□□ 1.93
CMTM3-210ENST00000565666 MST1RQ04912 1400 aa27.07■■□□□ 1.92
CMTM3-210ENST00000565666 NEUROD1Q13562 356 aa27.07■■□□□ 1.92
CMTM3-210ENST00000565666 WAPLQ7Z5K2 1190 aa27.07■■□□□ 1.92
CMTM3-210ENST00000565666 PHLPP1O60346 1717 aa27.07■■□□□ 1.92
CMTM3-210ENST00000565666 ADGRB1O14514 1584 aa27.05■■□□□ 1.92
CMTM3-210ENST00000565666 PLEKHH1Q9ULM0 1364 aa27.03■■□□□ 1.92
CMTM3-210ENST00000565666 CDC42BPGQ6DT37 1551 aa27.02■■□□□ 1.92
CMTM3-210ENST00000565666 BRINP3Q76B58 766 aa27.01■■□□□ 1.91
CMTM3-210ENST00000565666 SIRT1Q96EB6 747 aa27.01■■□□□ 1.91
CMTM3-210ENST00000565666 DLC1Q96QB1 1528 aa27■■□□□ 1.91
CMTM3-210ENST00000565666 KIAA1210Q9ULL0 1709 aa26.99■■□□□ 1.91
CMTM3-210ENST00000565666 L3MBTL2Q969R5 705 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms