RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 KANK1Q14678 1352 aa12.09□□□□□ -0.47
AC138869.3-201ENST00000563960 FAM135AQ9P2D6 1515 aa12.09□□□□□ -0.47
AC138869.3-201ENST00000563960 SMG6Q86US8 1419 aaKnown RBP12.09□□□□□ -0.47
AC138869.3-201ENST00000563960 HSP90AA1P07900 732 aaKnown RBP12.08□□□□□ -0.48
AC138869.3-201ENST00000563960 AAMPQ13685 434 aa12.08□□□□□ -0.48
AC138869.3-201ENST00000563960 SIGLEC1Q9BZZ2 1709 aa12.07□□□□□ -0.48
AC138869.3-201ENST00000563960 ARHGEF40Q8TER5 1519 aa12.07□□□□□ -0.48
AC138869.3-201ENST00000563960 NAP1L5Q96NT1 182 aaPredicted RBP12.06□□□□□ -0.48
AC138869.3-201ENST00000563960 KCNA4P22459 653 aa12.06□□□□□ -0.48
AC138869.3-201ENST00000563960 DDRGK1Q96HY6 314 aa12.06□□□□□ -0.48
AC138869.3-201ENST00000563960 ANKRD30BQ9BXX2 1392 aa12.06□□□□□ -0.48
AC138869.3-201ENST00000563960 FGD1P98174 961 aa12.05□□□□□ -0.48
AC138869.3-201ENST00000563960 FBXO31Q5XUX0 539 aaPredicted RBP12.05□□□□□ -0.48
AC138869.3-201ENST00000563960 ESF1Q9H501 851 aaKnown RBP12.05□□□□□ -0.48
AC138869.3-201ENST00000563960 MRS2Q9HD23 443 aa12.05□□□□□ -0.48
AC138869.3-201ENST00000563960 MROH1Q8NDA8 1641 aa12.05□□□□□ -0.48
AC138869.3-201ENST00000563960 UNC13BO14795 1591 aa12.05□□□□□ -0.48
AC138869.3-201ENST00000563960 SLC4A3P48751 1232 aa12.04□□□□□ -0.48
AC138869.3-201ENST00000563960 FRAT2O75474 233 aaPredicted RBP12.04□□□□□ -0.48
AC138869.3-201ENST00000563960 NUDCQ9Y266 331 aa12.04□□□□□ -0.48
AC138869.3-201ENST00000563960 KDM5DQ9BY66 1539 aa12.03□□□□□ -0.48
AC138869.3-201ENST00000563960 EIF2AK4Q9P2K8 1649 aaKnown RBP12.03□□□□□ -0.48
AC138869.3-201ENST00000563960 MS4A1P11836 297 aa12.03□□□□□ -0.48
AC138869.3-201ENST00000563960 CEBPAP49715 358 aaPredicted RBP12.03□□□□□ -0.48
AC138869.3-201ENST00000563960 PRKRIP1Q9H875 184 aaPredicted RBP12.02□□□□□ -0.48
AC138869.3-201ENST00000563960 PRDM15P57071 1507 aaPredicted RBP12.02□□□□□ -0.49
AC138869.3-201ENST00000563960 DEPDC5O75140 1603 aa12.02□□□□□ -0.49
AC138869.3-201ENST00000563960 PLA2R1Q13018 1463 aa12.01□□□□□ -0.49
AC138869.3-201ENST00000563960 RGL3Q3MIN7 710 aa12.01□□□□□ -0.49
AC138869.3-201ENST00000563960 IQGAP3Q86VI3 1631 aa12.01□□□□□ -0.49
AC138869.3-201ENST00000563960 AGLP35573 1532 aa12.01□□□□□ -0.49
AC138869.3-201ENST00000563960 ABCC3O15438 1527 aa12□□□□□ -0.49
AC138869.3-201ENST00000563960 PNNQ9H307 717 aaKnown RBP12□□□□□ -0.49
AC138869.3-201ENST00000563960 VWDEQ8N2E2 1590 aa12□□□□□ -0.49
AC138869.3-201ENST00000563960 RNF17Q9BXT8 1623 aaKnown RBP12□□□□□ -0.49
AC138869.3-201ENST00000563960 NPATQ14207 1427 aa12□□□□□ -0.49
AC138869.3-201ENST00000563960 REREQ9P2R6 1566 aa11.99□□□□□ -0.49
AC138869.3-201ENST00000563960 CNTLNQ9NXG0 1405 aa11.99□□□□□ -0.49
AC138869.3-201ENST00000563960 L3MBTL2Q969R5 705 aa11.99□□□□□ -0.49
AC138869.3-201ENST00000563960 PRDM4Q9UKN5 801 aa11.98□□□□□ -0.49
AC138869.3-201ENST00000563960 CFAP65Q6ZU64 1925 aaKnown RBP11.98□□□□□ -0.49
AC138869.3-201ENST00000563960 CEP152O94986 1710 aa11.98□□□□□ -0.49
AC138869.3-201ENST00000563960 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
AC138869.3-201ENST00000563960 CLCN1P35523 988 aa11.98□□□□□ -0.49
AC138869.3-201ENST00000563960 PDE4CQ08493 712 aa11.98□□□□□ -0.49
AC138869.3-201ENST00000563960 PPP6R1Q9UPN7 881 aa11.98□□□□□ -0.49
AC138869.3-201ENST00000563960 ZMYM3Q14202 1370 aa11.98□□□□□ -0.49
AC138869.3-201ENST00000563960 KDM2AQ9Y2K7 1162 aa11.97□□□□□ -0.49
AC138869.3-201ENST00000563960 CCDC144AA2RUR9 1427 aa11.97□□□□□ -0.49
AC138869.3-201ENST00000563960 E9PCH4 1651 aa11.96□□□□□ -0.49
AC138869.3-201ENST00000563960 BCORL1Q5H9F3 1711 aa11.96□□□□□ -0.49
AC138869.3-201ENST00000563960 EFCAB6Q5THR3 1501 aa11.96□□□□□ -0.5
AC138869.3-201ENST00000563960 UGGT1Q9NYU2 1555 aa11.95□□□□□ -0.5
AC138869.3-201ENST00000563960 LMTK2Q8IWU2 1503 aa11.95□□□□□ -0.5
AC138869.3-201ENST00000563960 HSPA5P11021 654 aaKnown RBP11.95□□□□□ -0.5
AC138869.3-201ENST00000563960 IDI1Q13907 227 aa11.95□□□□□ -0.5
AC138869.3-201ENST00000563960 ZNF326Q5BKZ1 582 aaKnown RBP11.95□□□□□ -0.5
AC138869.3-201ENST00000563960 EXOC6Q8TAG9 804 aa11.95□□□□□ -0.5
AC138869.3-201ENST00000563960 TET3O43151 1660 aa11.95□□□□□ -0.5
AC138869.3-201ENST00000563960 POGKQ9P215 609 aa11.95□□□□□ -0.5
AC138869.3-201ENST00000563960 RPRD2Q5VT52 1461 aaKnown RBP11.94□□□□□ -0.5
AC138869.3-201ENST00000563960 PTPRTO14522 1441 aa11.93□□□□□ -0.5
AC138869.3-201ENST00000563960 CLTCQ00610 1675 aaKnown RBP11.93□□□□□ -0.5
AC138869.3-201ENST00000563960 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
AC138869.3-201ENST00000563960 NUTM2DQ5VT03 806 aaPredicted RBP11.93□□□□□ -0.5
AC138869.3-201ENST00000563960 CENPJQ9HC77 1338 aaPredicted RBP11.92□□□□□ -0.5
AC138869.3-201ENST00000563960 CAMSAP1Q5T5Y3 1602 aa11.92□□□□□ -0.5
AC138869.3-201ENST00000563960 L1TD1Q5T7N2 865 aaKnown RBP11.92□□□□□ -0.5
AC138869.3-201ENST00000563960 RGS3P49796 1198 aa11.91□□□□□ -0.5
AC138869.3-201ENST00000563960 ARHGAP31Q2M1Z3 1444 aa11.91□□□□□ -0.5
AC138869.3-201ENST00000563960 SKAP1Q86WV1 359 aa11.91□□□□□ -0.5
AC138869.3-201ENST00000563960 EIF4G2P78344 907 aaKnown RBP eCLIP11.91□□□□□ -0.5
AC138869.3-201ENST00000563960 ADRA2BP18089 450 aa11.9□□□□□ -0.5
AC138869.3-201ENST00000563960 PDCL3Q9H2J4 239 aa11.9□□□□□ -0.5
AC138869.3-201ENST00000563960 NOS1P29475 1434 aa11.9□□□□□ -0.51
AC138869.3-201ENST00000563960 RRP1P56182 461 aaKnown RBP11.89□□□□□ -0.51
AC138869.3-201ENST00000563960 STAG3Q9UJ98 1225 aa11.89□□□□□ -0.51
AC138869.3-201ENST00000563960 NBPF8Q3BBV2 869 aa11.89□□□□□ -0.51
AC138869.3-201ENST00000563960 SENP3-EIF4A1A0A087X0R7 540 aa11.88□□□□□ -0.51
AC138869.3-201ENST00000563960 TRPM2O94759 1503 aa11.88□□□□□ -0.51
AC138869.3-201ENST00000563960 ERVK-7P63135 1459 aa11.88□□□□□ -0.51
AC138869.3-201ENST00000563960 SLC52A1Q9NWF4 448 aa11.88□□□□□ -0.51
AC138869.3-201ENST00000563960 CLTCL1P53675 1640 aa11.87□□□□□ -0.51
AC138869.3-201ENST00000563960 XRCC6P12956 609 aaKnown RBP eCLIP11.87□□□□□ -0.51
AC138869.3-201ENST00000563960 ZC3H13Q5T200 1668 aaKnown RBP11.87□□□□□ -0.51
AC138869.3-201ENST00000563960 CCDC7Q96M83 1385 aa11.87□□□□□ -0.51
AC138869.3-201ENST00000563960 SPHKAPQ2M3C7 1700 aa11.86□□□□□ -0.51
AC138869.3-201ENST00000563960 SYNMO15061 1565 aa11.86□□□□□ -0.51
AC138869.3-201ENST00000563960 KDM4FA0A1W2PPD8 638 aa11.86□□□□□ -0.51
AC138869.3-201ENST00000563960 MADDQ8WXG6 1647 aa11.86□□□□□ -0.51
AC138869.3-201ENST00000563960 SPATA31E1Q6ZUB1 1445 aa11.86□□□□□ -0.51
AC138869.3-201ENST00000563960 TNRQ92752 1358 aa11.86□□□□□ -0.51
AC138869.3-201ENST00000563960 BCL11BQ9C0K0 894 aaPredicted RBP11.85□□□□□ -0.51
AC138869.3-201ENST00000563960 PDIA4P13667 645 aaKnown RBP11.84□□□□□ -0.51
AC138869.3-201ENST00000563960 PANK2Q9BZ23 570 aa11.84□□□□□ -0.51
AC138869.3-201ENST00000563960 FER1L4A9Z1Z3 1794 aa11.84□□□□□ -0.51
AC138869.3-201ENST00000563960 PREX1Q8TCU6 1659 aa11.83□□□□□ -0.51
AC138869.3-201ENST00000563960 ARXQ96QS3 562 aa11.83□□□□□ -0.52
AC138869.3-201ENST00000563960 ADGRF5Q8IZF2 1346 aa11.83□□□□□ -0.52
AC138869.3-201ENST00000563960 RIMS1Q86UR5 1692 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms