RNA–Protein interactions for RNA: ENST00000563767.1

FANCA-214, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-214ENST00000563767 CLTCL1P53675 1640 aa19.33■□□□□ 0.68
FANCA-214ENST00000563767 RGS17Q9UGC6 210 aaPredicted RBP19.31■□□□□ 0.68
FANCA-214ENST00000563767 STAG3Q9UJ98 1225 aa19.31■□□□□ 0.68
FANCA-214ENST00000563767 POLR1AO95602 1720 aaPredicted RBP19.3■□□□□ 0.68
FANCA-214ENST00000563767 ARHGAP23Q9P227 1491 aa19.29■□□□□ 0.68
FANCA-214ENST00000563767 KIF1BO60333 1816 aa19.29■□□□□ 0.68
FANCA-214ENST00000563767 SLIT1O75093 1534 aa19.29■□□□□ 0.68
FANCA-214ENST00000563767 CHGAP10645 457 aaKnown RBP19.28■□□□□ 0.68
FANCA-214ENST00000563767 TMEM2Q9UHN6 1383 aa19.27■□□□□ 0.68
FANCA-214ENST00000563767 NEURL4Q96JN8 1562 aa19.27■□□□□ 0.67
FANCA-214ENST00000563767 LTKP29376 864 aa19.25■□□□□ 0.67
FANCA-214ENST00000563767 PCGF6Q9BYE7 350 aa19.24■□□□□ 0.67
FANCA-214ENST00000563767 ANKRD30BQ9BXX2 1392 aa19.23■□□□□ 0.67
FANCA-214ENST00000563767 TXNDC2Q86VQ3 553 aa19.23■□□□□ 0.67
FANCA-214ENST00000563767 CCDC144AA2RUR9 1427 aa19.22■□□□□ 0.67
FANCA-214ENST00000563767 ZFYVE9O95405 1425 aa19.22■□□□□ 0.67
FANCA-214ENST00000563767 MED14O60244 1454 aa19.22■□□□□ 0.67
FANCA-214ENST00000563767 SCAF11Q99590 1463 aaKnown RBP19.22■□□□□ 0.67
FANCA-214ENST00000563767 RIMS2Q9UQ26 1411 aa19.21■□□□□ 0.67
FANCA-214ENST00000563767 EID1Q9Y6B2 187 aa19.2■□□□□ 0.66
FANCA-214ENST00000563767 NPHP4O75161 1426 aaPredicted RBP19.19■□□□□ 0.66
FANCA-214ENST00000563767 POTEAQ6S8J7 498 aa19.19■□□□□ 0.66
FANCA-214ENST00000563767 IQGAP1P46940 1657 aa19.18■□□□□ 0.66
FANCA-214ENST00000563767 ZNF326Q5BKZ1 582 aaKnown RBP19.17■□□□□ 0.66
FANCA-214ENST00000563767 NUTM2DQ5VT03 806 aaPredicted RBP19.17■□□□□ 0.66
FANCA-214ENST00000563767 ALKQ9UM73 1620 aa19.17■□□□□ 0.66
FANCA-214ENST00000563767 DHX57Q6P158 1386 aaKnown RBP19.17■□□□□ 0.66
FANCA-214ENST00000563767 SPATA31E1Q6ZUB1 1445 aa19.17■□□□□ 0.66
FANCA-214ENST00000563767 NEXMIFQ5QGS0 1516 aa19.15■□□□□ 0.66
FANCA-214ENST00000563767 HDGFP51858 240 aaKnown RBP19.15■□□□□ 0.66
FANCA-214ENST00000563767 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.14■□□□□ 0.65
FANCA-214ENST00000563767 LRRC7Q96NW7 1537 aa19.13■□□□□ 0.65
FANCA-214ENST00000563767 PPLO60437 1756 aa19.13■□□□□ 0.65
FANCA-214ENST00000563767 RGL3Q3MIN7 710 aa19.12■□□□□ 0.65
FANCA-214ENST00000563767 PLEKHG1Q9ULL1 1385 aa19.11■□□□□ 0.65
FANCA-214ENST00000563767 RPGRIP1LQ68CZ1 1315 aa19.11■□□□□ 0.65
FANCA-214ENST00000563767 PPP1R15AO75807 674 aaPredicted RBP19.11■□□□□ 0.65
FANCA-214ENST00000563767 IFT172Q9UG01 1749 aa19.11■□□□□ 0.65
FANCA-214ENST00000563767 SLC26A8Q96RN1 970 aa19.08■□□□□ 0.64
FANCA-214ENST00000563767 NRXN3Q9Y4C0 1643 aa19.07■□□□□ 0.64
FANCA-214ENST00000563767 STRCP1A6NGW2 1772 aa19.06■□□□□ 0.64
FANCA-214ENST00000563767 BCANQ96GW7 911 aa19.06■□□□□ 0.64
FANCA-214ENST00000563767 ADAMTS13Q76LX8 1427 aa19.06■□□□□ 0.64
FANCA-214ENST00000563767 VGFO15240 615 aaPredicted RBP19.05■□□□□ 0.64
FANCA-214ENST00000563767 SIN3AQ96ST3 1273 aa19.05■□□□□ 0.64
FANCA-214ENST00000563767 SETBP1Q9Y6X0 1596 aa19.04■□□□□ 0.64
FANCA-214ENST00000563767 ADGRF5Q8IZF2 1346 aa19.03■□□□□ 0.64
FANCA-214ENST00000563767 TBX22Q9Y458 520 aa19.03■□□□□ 0.64
FANCA-214ENST00000563767 FAM135BQ49AJ0 1406 aa19.02■□□□□ 0.64
FANCA-214ENST00000563767 CHD2O14647 1828 aaKnown RBP19.02■□□□□ 0.63
FANCA-214ENST00000563767 DIP2AQ14689 1571 aa19.01■□□□□ 0.63
FANCA-214ENST00000563767 SETD1AO15047 1707 aaKnown RBP19■□□□□ 0.63
FANCA-214ENST00000563767 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
FANCA-214ENST00000563767 MYOM2P54296 1465 aa18.97■□□□□ 0.63
FANCA-214ENST00000563767 KCNA6P17658 529 aa18.97■□□□□ 0.63
FANCA-214ENST00000563767 UPF1Q92900 1129 aaKnown RBP eCLIP18.97■□□□□ 0.63
FANCA-214ENST00000563767 NRXN1Q9ULB1 1477 aa18.97■□□□□ 0.63
FANCA-214ENST00000563767 DCAF11Q8TEB1 546 aa18.96■□□□□ 0.63
FANCA-214ENST00000563767 KDM2AQ9Y2K7 1162 aa18.96■□□□□ 0.63
FANCA-214ENST00000563767 METP08581 1390 aa18.95■□□□□ 0.62
FANCA-214ENST00000563767 NWD1Q149M9 1564 aa18.95■□□□□ 0.62
FANCA-214ENST00000563767 PIK3C2GO75747 1445 aa18.95■□□□□ 0.62
FANCA-214ENST00000563767 PIK3R4Q99570 1358 aa18.94■□□□□ 0.62
FANCA-214ENST00000563767 PTPRUQ92729 1446 aa18.94■□□□□ 0.62
FANCA-214ENST00000563767 L3MBTL2Q969R5 705 aa18.92■□□□□ 0.62
FANCA-214ENST00000563767 XIRP1Q702N8 1843 aaKnown RBP18.92■□□□□ 0.62
FANCA-214ENST00000563767 STAC3Q96MF2 364 aa18.91■□□□□ 0.62
FANCA-214ENST00000563767 C14orf93Q9H972 538 aaKnown RBP18.91■□□□□ 0.62
FANCA-214ENST00000563767 AMOTL2Q9Y2J4 779 aa18.9■□□□□ 0.62
FANCA-214ENST00000563767 XRN1Q8IZH2 1706 aaKnown RBP18.89■□□□□ 0.61
FANCA-214ENST00000563767 CFAP70Q5T0N1 1121 aa18.89■□□□□ 0.61
FANCA-214ENST00000563767 TMEM94Q12767 1356 aa18.89■□□□□ 0.61
FANCA-214ENST00000563767 ZNF772Q68DY9 489 aaPredicted RBP18.88■□□□□ 0.61
FANCA-214ENST00000563767 PROSER2Q86WR7 435 aaPredicted RBP18.88■□□□□ 0.61
FANCA-214ENST00000563767 NKTRP30414 1462 aaKnown RBP18.88■□□□□ 0.61
FANCA-214ENST00000563767 ASXL1Q8IXJ9 1541 aa18.88■□□□□ 0.61
FANCA-214ENST00000563767 LAMC1P11047 1609 aa18.87■□□□□ 0.61
FANCA-214ENST00000563767 MEX3CQ5U5Q3 659 aaKnown RBP18.87■□□□□ 0.61
FANCA-214ENST00000563767 TMEM132EQ6IEE7 984 aa18.87■□□□□ 0.61
FANCA-214ENST00000563767 JCADQ9P266 1359 aa18.86■□□□□ 0.61
FANCA-214ENST00000563767 RBM33Q96EV2 1170 aaKnown RBP18.86■□□□□ 0.61
FANCA-214ENST00000563767 CLSPNQ9HAW4 1339 aa18.85■□□□□ 0.61
FANCA-214ENST00000563767 PRAG1Q86YV5 1406 aa18.84■□□□□ 0.61
FANCA-214ENST00000563767 CCER1Q8TC90 406 aaPredicted RBP18.84■□□□□ 0.61
FANCA-214ENST00000563767 SLAIN2Q9P270 581 aa18.84■□□□□ 0.61
FANCA-214ENST00000563767 SRCAPQ6ZRS2 3230 aa18.83■□□□□ 0.6
FANCA-214ENST00000563767 RXRBP28702 533 aa18.82■□□□□ 0.6
FANCA-214ENST00000563767 KIAA1210Q9ULL0 1709 aa18.82■□□□□ 0.6
FANCA-214ENST00000563767 LRPPRCP42704 1394 aaKnown RBP18.81■□□□□ 0.6
FANCA-214ENST00000563767 TONSLQ96HA7 1378 aa18.81■□□□□ 0.6
FANCA-214ENST00000563767 ADGRB1O14514 1584 aa18.81■□□□□ 0.6
FANCA-214ENST00000563767 YTHDC2Q9H6S0 1430 aaKnown RBP18.81■□□□□ 0.6
FANCA-214ENST00000563767 KNDC1Q76NI1 1749 aa18.8■□□□□ 0.6
FANCA-214ENST00000563767 STK26Q9P289 416 aa18.8■□□□□ 0.6
FANCA-214ENST00000563767 ROBO2Q9HCK4 1378 aa18.8■□□□□ 0.6
FANCA-214ENST00000563767 PTCH1Q13635 1447 aa18.79■□□□□ 0.6
FANCA-214ENST00000563767 ABCC11Q96J66 1382 aa18.79■□□□□ 0.6
FANCA-214ENST00000563767 SPATA31A6Q5VVP1 1343 aa18.78■□□□□ 0.6
FANCA-214ENST00000563767 TECPR2O15040 1411 aa18.78■□□□□ 0.6
FANCA-214ENST00000563767 NCOA3Q9Y6Q9 1424 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms