RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 POLR1AO95602 1720 aaPredicted RBP15.06■□□□□ 0
SNRPA1-211ENST00000560433 PREX1Q8TCU6 1659 aa15.06■□□□□ 0
SNRPA1-211ENST00000560433 REREQ9P2R6 1566 aa15.06■□□□□ 0
SNRPA1-211ENST00000560433 DISP3Q9P2K9 1392 aa15.06■□□□□ 0
SNRPA1-211ENST00000560433 STAG3Q9UJ98 1225 aa15.05■□□□□ 0
SNRPA1-211ENST00000560433 CENPBP07199 599 aaPredicted RBP15.05■□□□□ -0
SNRPA1-211ENST00000560433 MYO5BQ9ULV0 1848 aa15.04■□□□□ -0
SNRPA1-211ENST00000560433 IFT172Q9UG01 1749 aa15.04■□□□□ -0
SNRPA1-211ENST00000560433 CCDC184Q52MB2 194 aa15.04■□□□□ -0
SNRPA1-211ENST00000560433 SLC52A1Q9NWF4 448 aa15.04■□□□□ -0
SNRPA1-211ENST00000560433 PIK3C2BO00750 1634 aa15.03■□□□□ -0
SNRPA1-211ENST00000560433 CEBPAP49715 358 aaPredicted RBP15.03■□□□□ -0
SNRPA1-211ENST00000560433 STAC3Q96MF2 364 aa15.03■□□□□ -0
SNRPA1-211ENST00000560433 ERVK-7P63135 1459 aa15.03■□□□□ -0
SNRPA1-211ENST00000560433 TRAK1Q9UPV9 953 aa15.02■□□□□ -0
SNRPA1-211ENST00000560433 ZMYM3Q14202 1370 aa15.02■□□□□ -0
SNRPA1-211ENST00000560433 MYOM2P54296 1465 aa15.02■□□□□ -0
SNRPA1-211ENST00000560433 PPLO60437 1756 aa15.02□□□□□ -0.01
SNRPA1-211ENST00000560433 NEURL4Q96JN8 1562 aa15.02□□□□□ -0.01
SNRPA1-211ENST00000560433 PRKRIP1Q9H875 184 aaPredicted RBP15.01□□□□□ -0.01
SNRPA1-211ENST00000560433 PPP6R1Q9UPN7 881 aa15□□□□□ -0.01
SNRPA1-211ENST00000560433 LAMC1P11047 1609 aa15□□□□□ -0.01
SNRPA1-211ENST00000560433 SCAF11Q99590 1463 aaKnown RBP15□□□□□ -0.01
SNRPA1-211ENST00000560433 TMF1P82094 1093 aa15□□□□□ -0.01
SNRPA1-211ENST00000560433 PIK3C2GO75747 1445 aa14.99□□□□□ -0.01
SNRPA1-211ENST00000560433 NEXMIFQ5QGS0 1516 aa14.99□□□□□ -0.01
SNRPA1-211ENST00000560433 CCER2I3L3R5 266 aa14.98□□□□□ -0.01
SNRPA1-211ENST00000560433 VGFO15240 615 aaPredicted RBP14.98□□□□□ -0.01
SNRPA1-211ENST00000560433 IQGAP1P46940 1657 aa14.98□□□□□ -0.01
SNRPA1-211ENST00000560433 RPGRIP1LQ68CZ1 1315 aa14.98□□□□□ -0.01
SNRPA1-211ENST00000560433 NRXN1Q9ULB1 1477 aa14.98□□□□□ -0.01
SNRPA1-211ENST00000560433 C14orf93Q9H972 538 aaKnown RBP14.98□□□□□ -0.01
SNRPA1-211ENST00000560433 TMEM131LA2VDJ0 1609 aa14.97□□□□□ -0.01
SNRPA1-211ENST00000560433 STK26Q9P289 416 aa14.96□□□□□ -0.01
SNRPA1-211ENST00000560433 SAFB2Q14151 953 aaKnown RBP eCLIP14.96□□□□□ -0.01
SNRPA1-211ENST00000560433 PANK3Q9H999 370 aa14.94□□□□□ -0.02
SNRPA1-211ENST00000560433 KIAA1210Q9ULL0 1709 aa14.94□□□□□ -0.02
SNRPA1-211ENST00000560433 SPATA31D1Q6ZQQ2 1576 aa14.93□□□□□ -0.02
SNRPA1-211ENST00000560433 EIF3AQ14152 1382 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-211ENST00000560433 FAM9BQ8IZU0 186 aa14.92□□□□□ -0.02
SNRPA1-211ENST00000560433 MRS2Q9HD23 443 aa14.92□□□□□ -0.02
SNRPA1-211ENST00000560433 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-211ENST00000560433 CC2D1BQ5T0F9 858 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-211ENST00000560433 ADGRB1O14514 1584 aa14.91□□□□□ -0.02
SNRPA1-211ENST00000560433 A2ML1A8K2U0 1454 aa14.91□□□□□ -0.02
SNRPA1-211ENST00000560433 SENP3-EIF4A1A0A087X0R7 540 aa14.9□□□□□ -0.02
SNRPA1-211ENST00000560433 CENPJQ9HC77 1338 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-211ENST00000560433 PER1O15534 1290 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-211ENST00000560433 TNRQ92752 1358 aa14.89□□□□□ -0.03
SNRPA1-211ENST00000560433 BCANQ96GW7 911 aa14.88□□□□□ -0.03
SNRPA1-211ENST00000560433 RIMS2Q9UQ26 1411 aa14.88□□□□□ -0.03
SNRPA1-211ENST00000560433 GTF3C3Q9Y5Q9 886 aa14.87□□□□□ -0.03
SNRPA1-211ENST00000560433 SETBP1Q9Y6X0 1596 aa14.87□□□□□ -0.03
SNRPA1-211ENST00000560433 ASXL1Q8IXJ9 1541 aa14.85□□□□□ -0.03
SNRPA1-211ENST00000560433 HNRNPUQ00839 825 aaKnown RBP eCLIP14.85□□□□□ -0.03
SNRPA1-211ENST00000560433 ZFYVE9O95405 1425 aa14.85□□□□□ -0.03
SNRPA1-211ENST00000560433 TMC1Q8TDI8 760 aa14.84□□□□□ -0.03
SNRPA1-211ENST00000560433 CDCA8Q53HL2 280 aa14.84□□□□□ -0.03
SNRPA1-211ENST00000560433 FER1L4A9Z1Z3 1794 aa14.83□□□□□ -0.03
SNRPA1-211ENST00000560433 PRAM1Q96QH2 718 aa14.83□□□□□ -0.04
SNRPA1-211ENST00000560433 ALKQ9UM73 1620 aa14.83□□□□□ -0.04
SNRPA1-211ENST00000560433 C3P01024 1663 aa14.82□□□□□ -0.04
SNRPA1-211ENST00000560433 QRICH2Q9H0J4 1663 aa14.82□□□□□ -0.04
SNRPA1-211ENST00000560433 MINK1Q8N4C8 1332 aaPredicted RBP14.82□□□□□ -0.04
SNRPA1-211ENST00000560433 CABP2Q9NPB3 220 aa14.82□□□□□ -0.04
SNRPA1-211ENST00000560433 LTKP29376 864 aa14.82□□□□□ -0.04
SNRPA1-211ENST00000560433 WAPLQ7Z5K2 1190 aa14.82□□□□□ -0.04
SNRPA1-211ENST00000560433 SLC12A5Q9H2X9 1139 aa14.82□□□□□ -0.04
SNRPA1-211ENST00000560433 POGKQ9P215 609 aa14.81□□□□□ -0.04
SNRPA1-211ENST00000560433 KNSTRNQ9Y448 316 aa14.81□□□□□ -0.04
SNRPA1-211ENST00000560433 KTN1Q86UP2 1357 aaKnown RBP14.81□□□□□ -0.04
SNRPA1-211ENST00000560433 ARHGEF28Q8N1W1 1705 aaKnown RBP14.81□□□□□ -0.04
SNRPA1-211ENST00000560433 YTHDC2Q9H6S0 1430 aaKnown RBP14.8□□□□□ -0.04
SNRPA1-211ENST00000560433 KDM5AP29375 1690 aaKnown RBP14.8□□□□□ -0.04
SNRPA1-211ENST00000560433 PTPRMP28827 1452 aa14.8□□□□□ -0.04
SNRPA1-211ENST00000560433 MYOM1P52179 1685 aa14.8□□□□□ -0.04
SNRPA1-211ENST00000560433 MYO3AQ8NEV4 1616 aa14.8□□□□□ -0.04
SNRPA1-211ENST00000560433 CARD14Q9BXL6 1004 aa14.79□□□□□ -0.04
SNRPA1-211ENST00000560433 METP08581 1390 aa14.79□□□□□ -0.04
SNRPA1-211ENST00000560433 UBR1Q8IWV7 1749 aa14.79□□□□□ -0.04
SNRPA1-211ENST00000560433 MYBBP1AQ9BQG0 1328 aaKnown RBP14.78□□□□□ -0.04
SNRPA1-211ENST00000560433 TMEM2Q9UHN6 1383 aa14.78□□□□□ -0.04
SNRPA1-211ENST00000560433 RALBP1Q15311 655 aa14.78□□□□□ -0.04
SNRPA1-211ENST00000560433 TXNDC2Q86VQ3 553 aa14.77□□□□□ -0.04
SNRPA1-211ENST00000560433 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.77□□□□□ -0.04
SNRPA1-211ENST00000560433 SLC26A8Q96RN1 970 aa14.77□□□□□ -0.04
SNRPA1-211ENST00000560433 PLEKHH1Q9ULM0 1364 aa14.77□□□□□ -0.04
SNRPA1-211ENST00000560433 SRPK2P78362 688 aaKnown RBP14.77□□□□□ -0.05
SNRPA1-211ENST00000560433 SBNO2Q9Y2G9 1366 aa14.77□□□□□ -0.05
SNRPA1-211ENST00000560433 AMER1Q5JTC6 1135 aaPredicted RBP14.76□□□□□ -0.05
SNRPA1-211ENST00000560433 PARD3Q8TEW0 1356 aa14.76□□□□□ -0.05
SNRPA1-211ENST00000560433 EVC2Q86UK5 1308 aa14.76□□□□□ -0.05
SNRPA1-211ENST00000560433 NRXN3Q9Y4C0 1643 aa14.75□□□□□ -0.05
SNRPA1-211ENST00000560433 RIMS1Q86UR5 1692 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-211ENST00000560433 TULP4Q9NRJ4 1543 aa14.75□□□□□ -0.05
SNRPA1-211ENST00000560433 HDGFP51858 240 aaKnown RBP14.74□□□□□ -0.05
SNRPA1-211ENST00000560433 PNISRQ8TF01 805 aaKnown RBP14.74□□□□□ -0.05
SNRPA1-211ENST00000560433 SLC24A1O60721 1099 aa14.74□□□□□ -0.05
SNRPA1-211ENST00000560433 NLRP1Q9C000 1473 aa14.73□□□□□ -0.05
SNRPA1-211ENST00000560433 SETD1AO15047 1707 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms