RNA–Protein interactions for RNA: ENST00000559457.1

AC055874.1-202, humanhuman

TSL 3

Gene AC055874.1, Length 462 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-202ENST00000559457 ZFYVE9O95405 1425 aa27.46■■□□□ 1.99
AC055874.1-202ENST00000559457 IQGAP1P46940 1657 aa27.46■■□□□ 1.99
AC055874.1-202ENST00000559457 NPHP4O75161 1426 aaPredicted RBP27.45■■□□□ 1.98
AC055874.1-202ENST00000559457 MED14O60244 1454 aa27.44■■□□□ 1.98
AC055874.1-202ENST00000559457 NUTM2DQ5VT03 806 aaPredicted RBP27.43■■□□□ 1.98
AC055874.1-202ENST00000559457 SENP3Q9H4L4 574 aaPredicted RBP27.41■■□□□ 1.98
AC055874.1-202ENST00000559457 DHX57Q6P158 1386 aaKnown RBP27.4■■□□□ 1.98
AC055874.1-202ENST00000559457 PPP1R15AO75807 674 aaPredicted RBP27.4■■□□□ 1.98
AC055874.1-202ENST00000559457 HDGFP51858 240 aaKnown RBP27.39■■□□□ 1.98
AC055874.1-202ENST00000559457 NEXMIFQ5QGS0 1516 aa27.38■■□□□ 1.97
AC055874.1-202ENST00000559457 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.38■■□□□ 1.97
AC055874.1-202ENST00000559457 SPATA31E1Q6ZUB1 1445 aa27.38■■□□□ 1.97
AC055874.1-202ENST00000559457 RGL3Q3MIN7 710 aa27.37■■□□□ 1.97
AC055874.1-202ENST00000559457 PPLO60437 1756 aa27.35■■□□□ 1.97
AC055874.1-202ENST00000559457 BCANQ96GW7 911 aa27.34■■□□□ 1.97
AC055874.1-202ENST00000559457 PLEKHG1Q9ULL1 1385 aa27.33■■□□□ 1.97
AC055874.1-202ENST00000559457 RPGRIP1LQ68CZ1 1315 aa27.31■■□□□ 1.96
AC055874.1-202ENST00000559457 IFT172Q9UG01 1749 aa27.3■■□□□ 1.96
AC055874.1-202ENST00000559457 SLC26A8Q96RN1 970 aa27.29■■□□□ 1.96
AC055874.1-202ENST00000559457 ZNF335Q9H4Z2 1342 aaPredicted RBP27.29■■□□□ 1.96
AC055874.1-202ENST00000559457 NRXN3Q9Y4C0 1643 aa27.25■■□□□ 1.95
AC055874.1-202ENST00000559457 VGFO15240 615 aaPredicted RBP27.24■■□□□ 1.95
AC055874.1-202ENST00000559457 SIN3AQ96ST3 1273 aa27.23■■□□□ 1.95
AC055874.1-202ENST00000559457 ADAMTS13Q76LX8 1427 aa27.23■■□□□ 1.95
AC055874.1-202ENST00000559457 SETBP1Q9Y6X0 1596 aa27.22■■□□□ 1.95
AC055874.1-202ENST00000559457 STRCP1A6NGW2 1772 aa27.22■■□□□ 1.95
AC055874.1-202ENST00000559457 LTBP4Q8N2S1 1624 aa27.22■■□□□ 1.95
AC055874.1-202ENST00000559457 ADGRF5Q8IZF2 1346 aa27.19■■□□□ 1.94
AC055874.1-202ENST00000559457 DIP2AQ14689 1571 aa27.18■■□□□ 1.94
AC055874.1-202ENST00000559457 NEUROD1Q13562 356 aa27.18■■□□□ 1.94
AC055874.1-202ENST00000559457 TBX22Q9Y458 520 aa27.18■■□□□ 1.94
AC055874.1-202ENST00000559457 CHD2O14647 1828 aaKnown RBP27.15■■□□□ 1.94
AC055874.1-202ENST00000559457 DCAF11Q8TEB1 546 aa27.14■■□□□ 1.94
AC055874.1-202ENST00000559457 KDM2AQ9Y2K7 1162 aa27.14■■□□□ 1.94
AC055874.1-202ENST00000559457 MYOM2P54296 1465 aa27.13■■□□□ 1.93
AC055874.1-202ENST00000559457 SETD1AO15047 1707 aaKnown RBP27.13■■□□□ 1.93
AC055874.1-202ENST00000559457 ALKQ9UM73 1620 aa27.12■■□□□ 1.93
AC055874.1-202ENST00000559457 KCNA6P17658 529 aa27.11■■□□□ 1.93
AC055874.1-202ENST00000559457 CPS1P31327 1500 aa27.11■■□□□ 1.93
AC055874.1-202ENST00000559457 CERKQ8TCT0 537 aa27.1■■□□□ 1.93
AC055874.1-202ENST00000559457 METP08581 1390 aa27.09■■□□□ 1.93
AC055874.1-202ENST00000559457 NWD1Q149M9 1564 aa27.09■■□□□ 1.93
AC055874.1-202ENST00000559457 PIK3C2GO75747 1445 aa27.09■■□□□ 1.93
AC055874.1-202ENST00000559457 NRXN1Q9ULB1 1477 aa27.09■■□□□ 1.93
AC055874.1-202ENST00000559457 PIK3R4Q99570 1358 aa27.07■■□□□ 1.92
AC055874.1-202ENST00000559457 PTPRUQ92729 1446 aa27.07■■□□□ 1.92
AC055874.1-202ENST00000559457 L3MBTL2Q969R5 705 aa27.04■■□□□ 1.92
AC055874.1-202ENST00000559457 LRRC7Q96NW7 1537 aa27.04■■□□□ 1.92
AC055874.1-202ENST00000559457 XIRP1Q702N8 1843 aaKnown RBP27.02■■□□□ 1.92
AC055874.1-202ENST00000559457 XRN1Q8IZH2 1706 aaKnown RBP27.02■■□□□ 1.92
AC055874.1-202ENST00000559457 AMOTL2Q9Y2J4 779 aa27.02■■□□□ 1.92
AC055874.1-202ENST00000559457 NKTRP30414 1462 aaKnown RBP27.01■■□□□ 1.91
AC055874.1-202ENST00000559457 CCER1Q8TC90 406 aaPredicted RBP27.01■■□□□ 1.91
AC055874.1-202ENST00000559457 STAC3Q96MF2 364 aa27.01■■□□□ 1.91
AC055874.1-202ENST00000559457 LAMC1P11047 1609 aa27.01■■□□□ 1.91
AC055874.1-202ENST00000559457 CFAP70Q5T0N1 1121 aa27■■□□□ 1.91
AC055874.1-202ENST00000559457 PROSER2Q86WR7 435 aaPredicted RBP26.99■■□□□ 1.91
AC055874.1-202ENST00000559457 RBM33Q96EV2 1170 aaKnown RBP26.99■■□□□ 1.91
AC055874.1-202ENST00000559457 C14orf93Q9H972 538 aaKnown RBP26.99■■□□□ 1.91
AC055874.1-202ENST00000559457 ASXL1Q8IXJ9 1541 aa26.99■■□□□ 1.91
AC055874.1-202ENST00000559457 TMEM132EQ6IEE7 984 aa26.98■■□□□ 1.91
AC055874.1-202ENST00000559457 TONSLQ96HA7 1378 aa26.97■■□□□ 1.91
AC055874.1-202ENST00000559457 IQSEC2Q5JU85 1478 aa26.96■■□□□ 1.91
AC055874.1-202ENST00000559457 TMEM94Q12767 1356 aa26.95■■□□□ 1.9
AC055874.1-202ENST00000559457 CLSPNQ9HAW4 1339 aa26.94■■□□□ 1.9
AC055874.1-202ENST00000559457 PRAG1Q86YV5 1406 aa26.94■■□□□ 1.9
AC055874.1-202ENST00000559457 STK26Q9P289 416 aa26.92■■□□□ 1.9
AC055874.1-202ENST00000559457 KIAA1210Q9ULL0 1709 aa26.9■■□□□ 1.9
AC055874.1-202ENST00000559457 LRPPRCP42704 1394 aaKnown RBP26.89■■□□□ 1.9
AC055874.1-202ENST00000559457 YTHDC2Q9H6S0 1430 aaKnown RBP26.89■■□□□ 1.89
AC055874.1-202ENST00000559457 ADGRB1O14514 1584 aa26.88■■□□□ 1.89
AC055874.1-202ENST00000559457 KNDC1Q76NI1 1749 aa26.88■■□□□ 1.89
AC055874.1-202ENST00000559457 ROBO2Q9HCK4 1378 aa26.88■■□□□ 1.89
AC055874.1-202ENST00000559457 PTCH1Q13635 1447 aa26.86■■□□□ 1.89
AC055874.1-202ENST00000559457 C14orf37Q86TY3 774 aa26.85■■□□□ 1.89
AC055874.1-202ENST00000559457 ABCC11Q96J66 1382 aa26.84■■□□□ 1.89
AC055874.1-202ENST00000559457 TECPR2O15040 1411 aa26.83■■□□□ 1.89
AC055874.1-202ENST00000559457 UBAP1LF5GYI3 381 aa26.83■■□□□ 1.89
AC055874.1-202ENST00000559457 NBPF1Q3BBV0 1214 aa26.83■■□□□ 1.89
AC055874.1-202ENST00000559457 NBPF8Q3BBV2 869 aa26.83■■□□□ 1.89
AC055874.1-202ENST00000559457 TRPM1Q7Z4N2 1603 aa26.83■■□□□ 1.88
AC055874.1-202ENST00000559457 NCOA3Q9Y6Q9 1424 aa26.82■■□□□ 1.88
AC055874.1-202ENST00000559457 NALCNQ8IZF0 1738 aa26.8■■□□□ 1.88
AC055874.1-202ENST00000559457 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.8■■□□□ 1.88
AC055874.1-202ENST00000559457 MSH6P52701 1360 aa26.8■■□□□ 1.88
AC055874.1-202ENST00000559457 WAPLQ7Z5K2 1190 aa26.79■■□□□ 1.88
AC055874.1-202ENST00000559457 FBXO41Q8TF61 875 aa26.79■■□□□ 1.88
AC055874.1-202ENST00000559457 TRAK1Q9UPV9 953 aa26.79■■□□□ 1.88
AC055874.1-202ENST00000559457 PLEKHH1Q9ULM0 1364 aa26.78■■□□□ 1.88
AC055874.1-202ENST00000559457 TOM1O60784 492 aa26.76■■□□□ 1.87
AC055874.1-202ENST00000559457 DLC1Q96QB1 1528 aa26.75■■□□□ 1.87
AC055874.1-202ENST00000559457 ADGRL3Q9HAR2 1447 aa26.75■■□□□ 1.87
AC055874.1-202ENST00000559457 C19orf44Q9H6X5 657 aa26.75■■□□□ 1.87
AC055874.1-202ENST00000559457 FAM135BQ49AJ0 1406 aa26.74■■□□□ 1.87
AC055874.1-202ENST00000559457 ARHGEF28Q8N1W1 1705 aaKnown RBP26.74■■□□□ 1.87
AC055874.1-202ENST00000559457 SIRT1Q96EB6 747 aa26.73■■□□□ 1.87
AC055874.1-202ENST00000559457 PRAM1Q96QH2 718 aa26.73■■□□□ 1.87
AC055874.1-202ENST00000559457 PIP4K2BP78356 416 aa26.72■■□□□ 1.87
AC055874.1-202ENST00000559457 TIMELESSQ9UNS1 1208 aa26.72■■□□□ 1.87
AC055874.1-202ENST00000559457 ROCK2O75116 1388 aaKnown RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms