RNA–Protein interactions for RNA: ENST00000559457.1

AC055874.1-202, humanhuman

TSL 3

Gene AC055874.1, Length 462 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-202ENST00000559457 NISCHQ9Y2I1 1504 aa44.97■■■■■ 4.79
AC055874.1-202ENST00000559457 CCDC180Q9P1Z9 1646 aa39.87■■■■□ 3.97
AC055874.1-202ENST00000559457 ABCC9O60706 1549 aa38.81■■■■□ 3.8
AC055874.1-202ENST00000559457 DCAF8L2P0C7V8 631 aa37.53■■■■□ 3.6
AC055874.1-202ENST00000559457 ZCCHC6Q5VYS8 1495 aaKnown RBP37.51■■■■□ 3.59
AC055874.1-202ENST00000559457 NACADO15069 1562 aa37.4■■■■□ 3.58
AC055874.1-202ENST00000559457 RB1CC1Q8TDY2 1594 aa37.4■■■■□ 3.58
AC055874.1-202ENST00000559457 MYO15BQ96JP2 1530 aa37.2■■■■□ 3.55
AC055874.1-202ENST00000559457 DCAF1Q9Y4B6 1507 aa37.17■■■■□ 3.54
AC055874.1-202ENST00000559457 UNC13AQ9UPW8 1703 aa36.67■■■■□ 3.46
AC055874.1-202ENST00000559457 SCRIBQ14160 1630 aa36.47■■■■□ 3.43
AC055874.1-202ENST00000559457 PABPN1Q86U42 306 aaKnown RBP eCLIP36.32■■■■□ 3.4
AC055874.1-202ENST00000559457 BICRAQ9NZM4 1560 aa36.29■■■■□ 3.4
AC055874.1-202ENST00000559457 SHROOM4Q9ULL8 1493 aa35.81■■■■□ 3.32
AC055874.1-202ENST00000559457 DNAJC5BQ9UF47 199 aa35.39■■■■□ 3.26
AC055874.1-202ENST00000559457 EIF4G1Q04637 1599 aaKnown RBP35.3■■■■□ 3.24
AC055874.1-202ENST00000559457 CC2D2AQ9P2K1 1620 aa35.11■■■■□ 3.21
AC055874.1-202ENST00000559457 CECR2Q9BXF3 1484 aa35.04■■■■□ 3.2
AC055874.1-202ENST00000559457 SMARCA4P51532 1647 aa34.87■■■■□ 3.17
AC055874.1-202ENST00000559457 BAZ1AQ9NRL2 1556 aaPredicted RBP34.83■■■■□ 3.17
AC055874.1-202ENST00000559457 MROH2BQ7Z745 1585 aa34.7■■■■□ 3.14
AC055874.1-202ENST00000559457 ATAD2BQ9ULI0 1458 aa34.58■■■■□ 3.13
AC055874.1-202ENST00000559457 SMARCA2P51531 1590 aa34.54■■■■□ 3.12
AC055874.1-202ENST00000559457 NCAPD3P42695 1498 aa34.49■■■■□ 3.11
AC055874.1-202ENST00000559457 PEG3Q9GZU2 1588 aa34.47■■■■□ 3.11
AC055874.1-202ENST00000559457 WIZO95785 1651 aa34.38■■■■□ 3.09
AC055874.1-202ENST00000559457 RSF1Q96T23 1441 aaPredicted RBP34.37■■■■□ 3.09
AC055874.1-202ENST00000559457 HMGXB3Q12766 1538 aa34.36■■■■□ 3.09
AC055874.1-202ENST00000559457 BAZ1BQ9UIG0 1483 aaKnown RBP34.33■■■■□ 3.09
AC055874.1-202ENST00000559457 TOP2AP11388 1531 aaKnown RBP33.96■■■■□ 3.03
AC055874.1-202ENST00000559457 SUPT5HO00267 1087 aaKnown RBP33.75■■■□□ 2.99
AC055874.1-202ENST00000559457 NESP48681 1621 aa33.68■■■□□ 2.98
AC055874.1-202ENST00000559457 CCDC88BA6NC98 1476 aa33.57■■■□□ 2.97
AC055874.1-202ENST00000559457 LAMC3Q9Y6N6 1575 aa33.56■■■□□ 2.96
AC055874.1-202ENST00000559457 CADPSQ9ULU8 1353 aa33.51■■■□□ 2.96
AC055874.1-202ENST00000559457 ERCC6Q03468 1493 aa33.41■■■□□ 2.94
AC055874.1-202ENST00000559457 CFTRP13569 1480 aa33.37■■■□□ 2.93
AC055874.1-202ENST00000559457 PDS5BQ9NTI5 1447 aa33.31■■■□□ 2.92
AC055874.1-202ENST00000559457 KIF21AQ7Z4S6 1674 aa33.31■■■□□ 2.92
AC055874.1-202ENST00000559457 PRDM2Q13029 1718 aa33.23■■■□□ 2.91
AC055874.1-202ENST00000559457 FANCD2Q9BXW9 1451 aa33.17■■■□□ 2.9
AC055874.1-202ENST00000559457 CEP164Q9UPV0 1460 aa33.09■■■□□ 2.89
AC055874.1-202ENST00000559457 THOC2Q8NI27 1593 aaKnown RBP33.09■■■□□ 2.89
AC055874.1-202ENST00000559457 MRC2Q9UBG0 1479 aa32.99■■■□□ 2.87
AC055874.1-202ENST00000559457 CUX2O14529 1486 aa32.91■■■□□ 2.86
AC055874.1-202ENST00000559457 WDR62O43379 1518 aa32.87■■■□□ 2.85
AC055874.1-202ENST00000559457 URB2Q14146 1524 aaKnown RBP32.83■■■□□ 2.85
AC055874.1-202ENST00000559457 TOPBP1Q92547 1522 aa32.67■■■□□ 2.82
AC055874.1-202ENST00000559457 DNMBPQ6XZF7 1577 aa32.65■■■□□ 2.82
AC055874.1-202ENST00000559457 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
AC055874.1-202ENST00000559457 CUX1P39880 1505 aa32.54■■■□□ 2.8
AC055874.1-202ENST00000559457 POLA1P09884 1462 aaPredicted RBP32.4■■■□□ 2.78
AC055874.1-202ENST00000559457 WRNQ14191 1432 aaPredicted RBP eCLIP32.39■■■□□ 2.78
AC055874.1-202ENST00000559457 FGD5Q6ZNL6 1462 aa32.37■■■□□ 2.77
AC055874.1-202ENST00000559457 IFT140Q96RY7 1462 aa32.36■■■□□ 2.77
AC055874.1-202ENST00000559457 SYNJ1O43426 1573 aa32.35■■■□□ 2.77
AC055874.1-202ENST00000559457 BIVM-ERCC5R4GMW8 1640 aa32.32■■■□□ 2.76
AC055874.1-202ENST00000559457 TOP2BQ02880 1626 aa32.31■■■□□ 2.76
AC055874.1-202ENST00000559457 TARBP1Q13395 1621 aaKnown RBP32.3■■■□□ 2.76
AC055874.1-202ENST00000559457 RAD54L2Q9Y4B4 1467 aa32.29■■■□□ 2.76
AC055874.1-202ENST00000559457 SOGA1O94964 1423 aa32.26■■■□□ 2.76
AC055874.1-202ENST00000559457 ZNF608Q9ULD9 1512 aaPredicted RBP32.26■■■□□ 2.75
AC055874.1-202ENST00000559457 EIF4G3O43432 1585 aaKnown RBP32.13■■■□□ 2.73
AC055874.1-202ENST00000559457 WDR97A6NE52 1622 aa32.11■■■□□ 2.73
AC055874.1-202ENST00000559457 AQRO60306 1485 aaKnown RBP eCLIP32.1■■■□□ 2.73
AC055874.1-202ENST00000559457 TDRD9Q8NDG6 1382 aaKnown RBP32.07■■■□□ 2.73
AC055874.1-202ENST00000559457 ABCA10Q8WWZ4 1543 aa32.04■■■□□ 2.72
AC055874.1-202ENST00000559457 ABCA5Q8WWZ7 1642 aa31.92■■■□□ 2.7
AC055874.1-202ENST00000559457 GAPVD1Q14C86 1478 aa31.91■■■□□ 2.7
AC055874.1-202ENST00000559457 PBRM1Q86U86 1689 aa31.89■■■□□ 2.7
AC055874.1-202ENST00000559457 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
AC055874.1-202ENST00000559457 TRIM41Q8WV44 630 aa31.82■■■□□ 2.68
AC055874.1-202ENST00000559457 SNAPC4Q5SXM2 1469 aa31.8■■■□□ 2.68
AC055874.1-202ENST00000559457 CHD1O14646 1710 aa31.73■■■□□ 2.67
AC055874.1-202ENST00000559457 MAGI1Q96QZ7 1491 aaPredicted RBP31.72■■■□□ 2.67
AC055874.1-202ENST00000559457 KIF27Q86VH2 1401 aa31.68■■■□□ 2.66
AC055874.1-202ENST00000559457 FBLN2P98095 1184 aa31.67■■■□□ 2.66
AC055874.1-202ENST00000559457 ERICH3Q5RHP9 1530 aa31.66■■■□□ 2.66
AC055874.1-202ENST00000559457 CHIC1Q5VXU3 224 aa31.62■■■□□ 2.65
AC055874.1-202ENST00000559457 DNAJC5Q9H3Z4 198 aa31.62■■■□□ 2.65
AC055874.1-202ENST00000559457 SYNJ2O15056 1496 aa31.61■■■□□ 2.65
AC055874.1-202ENST00000559457 OSCARQ8IYS5 282 aa31.61■■■□□ 2.65
AC055874.1-202ENST00000559457 ADAMTS12P58397 1594 aa31.6■■■□□ 2.65
AC055874.1-202ENST00000559457 CHMP7Q8WUX9 453 aaPredicted RBP31.59■■■□□ 2.65
AC055874.1-202ENST00000559457 RUSC2Q8N2Y8 1516 aa31.55■■■□□ 2.64
AC055874.1-202ENST00000559457 IGF1RP08069 1367 aa31.53■■■□□ 2.64
AC055874.1-202ENST00000559457 FHAD1B1AJZ9 1412 aa31.52■■■□□ 2.64
AC055874.1-202ENST00000559457 CUL7Q14999 1698 aa31.45■■■□□ 2.63
AC055874.1-202ENST00000559457 GRIN2AQ12879 1464 aa31.45■■■□□ 2.62
AC055874.1-202ENST00000559457 CARMIL1Q5VZK9 1371 aa31.36■■■□□ 2.61
AC055874.1-202ENST00000559457 CLASP1Q7Z460 1538 aa31.32■■■□□ 2.6
AC055874.1-202ENST00000559457 CEP170Q5SW79 1584 aa31.31■■■□□ 2.6
AC055874.1-202ENST00000559457 NUP160Q12769 1436 aa31.28■■■□□ 2.6
AC055874.1-202ENST00000559457 FAM9AQ8IZU1 332 aaPredicted RBP31.22■■■□□ 2.59
AC055874.1-202ENST00000559457 EEA1Q15075 1411 aa31.22■■■□□ 2.59
AC055874.1-202ENST00000559457 RAPGEF2Q9Y4G8 1499 aa31.2■■■□□ 2.58
AC055874.1-202ENST00000559457 CSRNP3Q8WYN3 585 aa31.18■■■□□ 2.58
AC055874.1-202ENST00000559457 RIMBP3CA6NJZ7 1639 aa31.14■■■□□ 2.58
AC055874.1-202ENST00000559457 RIMBP3BA6NNM3 1639 aa31.14■■■□□ 2.58
AC055874.1-202ENST00000559457 RIMBP3Q9UFD9 1639 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 305.4 ms