RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 GORABQ5T7V8 394 aa7.78□□□□□ -1.16
CTDSPL2-206ENST00000559175 RICTORQ6R327 1708 aa7.78□□□□□ -1.16
CTDSPL2-206ENST00000559175 PLEKHD1A6NEE1 506 aa7.78□□□□□ -1.16
CTDSPL2-206ENST00000559175 ARHGEF1Q92888 912 aaKnown RBP7.78□□□□□ -1.16
CTDSPL2-206ENST00000559175 VTI1AQ96AJ9 217 aa7.78□□□□□ -1.16
CTDSPL2-206ENST00000559175 RFX1P22670 979 aa7.78□□□□□ -1.16
CTDSPL2-206ENST00000559175 SKIV2LQ15477 1246 aaKnown RBP7.78□□□□□ -1.16
CTDSPL2-206ENST00000559175 DRC1Q96MC2 740 aa7.77□□□□□ -1.17
CTDSPL2-206ENST00000559175 RIOK3O14730 519 aaKnown RBP7.77□□□□□ -1.17
CTDSPL2-206ENST00000559175 APBB1IPQ7Z5R6 666 aaPredicted RBP7.77□□□□□ -1.17
CTDSPL2-206ENST00000559175 TMTC2Q8N394 836 aa7.77□□□□□ -1.17
CTDSPL2-206ENST00000559175 FNBP4Q8N3X1 1017 aaPredicted RBP7.77□□□□□ -1.17
CTDSPL2-206ENST00000559175 CHMP4BQ9H444 224 aaKnown RBP7.77□□□□□ -1.17
CTDSPL2-206ENST00000559175 MROH2AA6NES4 1674 aa7.76□□□□□ -1.17
CTDSPL2-206ENST00000559175 MAFGO15525 162 aa7.76□□□□□ -1.17
CTDSPL2-206ENST00000559175 SUGT1Q9Y2Z0 365 aa7.76□□□□□ -1.17
CTDSPL2-206ENST00000559175 RAD54L2Q9Y4B4 1467 aa7.76□□□□□ -1.17
CTDSPL2-206ENST00000559175 KDM5AP29375 1690 aaKnown RBP7.76□□□□□ -1.17
CTDSPL2-206ENST00000559175 FRMPD1Q5SYB0 1578 aa7.76□□□□□ -1.17
CTDSPL2-206ENST00000559175 GPIHBP1Q8IV16 184 aa7.76□□□□□ -1.17
CTDSPL2-206ENST00000559175 ATP1B4Q9UN42 357 aaPredicted RBP7.76□□□□□ -1.17
CTDSPL2-206ENST00000559175 SND1Q7KZF4 910 aaKnown RBP eCLIP7.75□□□□□ -1.17
CTDSPL2-206ENST00000559175 DNAJC2Q99543 621 aaKnown RBP7.75□□□□□ -1.17
CTDSPL2-206ENST00000559175 NEUROD1Q13562 356 aa7.74□□□□□ -1.17
CTDSPL2-206ENST00000559175 SREK1Q8WXA9 508 aaKnown RBP7.74□□□□□ -1.17
CTDSPL2-206ENST00000559175 KLHL42Q9P2K6 505 aa7.74□□□□□ -1.17
CTDSPL2-206ENST00000559175 CROCC2H7BZ55 1655 aa7.74□□□□□ -1.17
CTDSPL2-206ENST00000559175 SPTY2D1Q68D10 685 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL2-206ENST00000559175 ERCC6L2Q5T890 1561 aa7.74□□□□□ -1.17
CTDSPL2-206ENST00000559175 E2F4Q16254 413 aa7.73□□□□□ -1.17
CTDSPL2-206ENST00000559175 RAPGEF6Q8TEU7 1601 aa7.73□□□□□ -1.17
CTDSPL2-206ENST00000559175 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.73□□□□□ -1.17
CTDSPL2-206ENST00000559175 MAP4K4O95819 1239 aaPredicted RBP7.73□□□□□ -1.17
CTDSPL2-206ENST00000559175 SECISBP2LQ93073 1101 aaKnown RBP7.73□□□□□ -1.17
CTDSPL2-206ENST00000559175 ZNF330Q9Y3S2 320 aaPredicted RBP7.73□□□□□ -1.17
CTDSPL2-206ENST00000559175 WDR7Q9Y4E6 1490 aa7.73□□□□□ -1.17
CTDSPL2-206ENST00000559175 CANXP27824 592 aaKnown RBP7.72□□□□□ -1.17
CTDSPL2-206ENST00000559175 MAGI3Q5TCQ9 1506 aa7.72□□□□□ -1.17
CTDSPL2-206ENST00000559175 RTL5Q5HYW3 569 aaPredicted RBP7.72□□□□□ -1.17
CTDSPL2-206ENST00000559175 KIF27Q86VH2 1401 aa7.72□□□□□ -1.17
CTDSPL2-206ENST00000559175 TCF3P15923 654 aa7.72□□□□□ -1.17
CTDSPL2-206ENST00000559175 EVI5LQ96CN4 794 aa7.72□□□□□ -1.17
CTDSPL2-206ENST00000559175 DDRGK1Q96HY6 314 aa7.72□□□□□ -1.17
CTDSPL2-206ENST00000559175 IGF1RP08069 1367 aa7.71□□□□□ -1.17
CTDSPL2-206ENST00000559175 RAPGEF2Q9Y4G8 1499 aa7.71□□□□□ -1.17
CTDSPL2-206ENST00000559175 MAST1Q9Y2H9 1570 aa7.71□□□□□ -1.18
CTDSPL2-206ENST00000559175 KDM5CP41229 1560 aa7.71□□□□□ -1.18
CTDSPL2-206ENST00000559175 ITSN2Q9NZM3 1697 aa7.71□□□□□ -1.18
CTDSPL2-206ENST00000559175 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.7□□□□□ -1.18
CTDSPL2-206ENST00000559175 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.7□□□□□ -1.18
CTDSPL2-206ENST00000559175 PREX2Q70Z35 1606 aa7.7□□□□□ -1.18
CTDSPL2-206ENST00000559175 KCNA1Q09470 495 aa7.7□□□□□ -1.18
CTDSPL2-206ENST00000559175 IPO4Q8TEX9 1081 aaKnown RBP7.7□□□□□ -1.18
CTDSPL2-206ENST00000559175 PCF11O94913 1555 aaKnown RBP7.69□□□□□ -1.18
CTDSPL2-206ENST00000559175 YTHDC1Q96MU7 727 aaKnown RBP7.69□□□□□ -1.18
CTDSPL2-206ENST00000559175 KCNG1Q9UIX4 513 aa7.69□□□□□ -1.18
CTDSPL2-206ENST00000559175 ZC3H4Q9UPT8 1303 aaKnown RBP7.69□□□□□ -1.18
CTDSPL2-206ENST00000559175 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.69□□□□□ -1.18
CTDSPL2-206ENST00000559175 MLLT3P42568 568 aaPredicted RBP7.69□□□□□ -1.18
CTDSPL2-206ENST00000559175 FYCO1Q9BQS8 1478 aa7.68□□□□□ -1.18
CTDSPL2-206ENST00000559175 HOXD11P31277 338 aaPredicted RBP7.68□□□□□ -1.18
CTDSPL2-206ENST00000559175 PARP9Q8IXQ6 854 aa7.68□□□□□ -1.18
CTDSPL2-206ENST00000559175 ADAMTSL3P82987 1691 aa7.68□□□□□ -1.18
CTDSPL2-206ENST00000559175 PATL2C9JE40 543 aaKnown RBP7.67□□□□□ -1.18
CTDSPL2-206ENST00000559175 CALR3Q96L12 384 aaKnown RBP7.67□□□□□ -1.18
CTDSPL2-206ENST00000559175 ABCC10Q5T3U5 1492 aa7.67□□□□□ -1.18
CTDSPL2-206ENST00000559175 ZNF142P52746 1687 aaPredicted RBP7.67□□□□□ -1.18
CTDSPL2-206ENST00000559175 TIAM1Q13009 1591 aa7.67□□□□□ -1.18
CTDSPL2-206ENST00000559175 GPATCH3Q96I76 525 aa7.67□□□□□ -1.18
CTDSPL2-206ENST00000559175 TERF2IPQ9NYB0 399 aa7.67□□□□□ -1.18
CTDSPL2-206ENST00000559175 RBM47A0AV96 593 aaKnown RBP7.66□□□□□ -1.18
CTDSPL2-206ENST00000559175 SMYD5Q6GMV2 418 aa7.66□□□□□ -1.18
CTDSPL2-206ENST00000559175 PLXNC1O60486 1568 aa7.66□□□□□ -1.18
CTDSPL2-206ENST00000559175 RALBP1Q15311 655 aa7.66□□□□□ -1.18
CTDSPL2-206ENST00000559175 GCC2Q8IWJ2 1684 aa7.66□□□□□ -1.18
CTDSPL2-206ENST00000559175 FOXD4Q12950 439 aaPredicted RBP7.66□□□□□ -1.18
CTDSPL2-206ENST00000559175 CDC42BPAQ5VT25 1732 aa7.65□□□□□ -1.18
CTDSPL2-206ENST00000559175 CDCA7Q9BWT1 371 aaPredicted RBP7.65□□□□□ -1.18
CTDSPL2-206ENST00000559175 MYO5CQ9NQX4 1742 aa7.65□□□□□ -1.18
CTDSPL2-206ENST00000559175 CDC42BPBQ9Y5S2 1711 aa7.65□□□□□ -1.18
CTDSPL2-206ENST00000559175 KAT6BQ8WYB5 2073 aa7.65□□□□□ -1.18
CTDSPL2-206ENST00000559175 DEPDC5O75140 1603 aa7.65□□□□□ -1.18
CTDSPL2-206ENST00000559175 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.65□□□□□ -1.18
CTDSPL2-206ENST00000559175 GRIPAP1Q4V328 841 aa7.65□□□□□ -1.18
CTDSPL2-206ENST00000559175 TXNDC2Q86VQ3 553 aa7.65□□□□□ -1.18
CTDSPL2-206ENST00000559175 FTSJ3Q8IY81 847 aaKnown RBP7.65□□□□□ -1.18
CTDSPL2-206ENST00000559175 COG6Q9Y2V7 657 aa7.65□□□□□ -1.18
CTDSPL2-206ENST00000559175 EIF2AK4Q9P2K8 1649 aaKnown RBP7.65□□□□□ -1.18
CTDSPL2-206ENST00000559175 GABBR1Q9UBS5 961 aa7.65□□□□□ -1.19
CTDSPL2-206ENST00000559175 ARHGAP35Q9NRY4 1499 aa7.65□□□□□ -1.19
CTDSPL2-206ENST00000559175 FER1L4A9Z1Z3 1794 aa7.65□□□□□ -1.19
CTDSPL2-206ENST00000559175 MCCP23508 829 aa7.64□□□□□ -1.19
CTDSPL2-206ENST00000559175 HECW1Q76N89 1606 aa7.64□□□□□ -1.19
CTDSPL2-206ENST00000559175 ZNF16P17020 682 aaPredicted RBP7.64□□□□□ -1.19
CTDSPL2-206ENST00000559175 TSR1Q2NL82 804 aaKnown RBP7.64□□□□□ -1.19
CTDSPL2-206ENST00000559175 GIPC2Q8TF65 315 aa7.64□□□□□ -1.19
CTDSPL2-206ENST00000559175 PTMAP06454 111 aaKnown RBP7.64□□□□□ -1.19
CTDSPL2-206ENST00000559175 PCMTD1Q96MG8 357 aaPredicted RBP7.64□□□□□ -1.19
CTDSPL2-206ENST00000559175 PNMA2Q9UL42 364 aa7.64□□□□□ -1.19
CTDSPL2-206ENST00000559175 PPP1R15AO75807 674 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms