RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 BRINP3Q76B58 766 aa20.55■□□□□ 0.88
ABCD4-226ENST00000556971 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.55■□□□□ 0.88
ABCD4-226ENST00000556971 C14orf37Q86TY3 774 aa20.54■□□□□ 0.88
ABCD4-226ENST00000556971 CFDP1Q9UEE9 299 aaPredicted RBP20.54■□□□□ 0.88
ABCD4-226ENST00000556971 PNPLA6Q8IY17 1366 aa20.53■□□□□ 0.88
ABCD4-226ENST00000556971 PIK3C2BO00750 1634 aa20.52■□□□□ 0.88
ABCD4-226ENST00000556971 CAMSAP2Q08AD1 1489 aa20.51■□□□□ 0.87
ABCD4-226ENST00000556971 SF3B2Q13435 895 aaKnown RBP20.51■□□□□ 0.87
ABCD4-226ENST00000556971 CADPS2Q86UW7 1296 aa20.51■□□□□ 0.87
ABCD4-226ENST00000556971 ASXL1Q8IXJ9 1541 aa20.51■□□□□ 0.87
ABCD4-226ENST00000556971 CCDC18Q5T9S5 1454 aa20.49■□□□□ 0.87
ABCD4-226ENST00000556971 ARHGAP35Q9NRY4 1499 aa20.49■□□□□ 0.87
ABCD4-226ENST00000556971 ATF3P18847 181 aa20.48■□□□□ 0.87
ABCD4-226ENST00000556971 CHD2O14647 1828 aaKnown RBP20.48■□□□□ 0.87
ABCD4-226ENST00000556971 C1QTNF8P60827 252 aa20.47■□□□□ 0.87
ABCD4-226ENST00000556971 MBD5Q9P267 1494 aa20.47■□□□□ 0.87
ABCD4-226ENST00000556971 CEP152O94986 1710 aa20.47■□□□□ 0.87
ABCD4-226ENST00000556971 MROH1Q8NDA8 1641 aa20.46■□□□□ 0.87
ABCD4-226ENST00000556971 ZNF784Q8NCA9 323 aaPredicted RBP20.46■□□□□ 0.87
ABCD4-226ENST00000556971 LRRC59Q96AG4 307 aaKnown RBP20.46■□□□□ 0.87
ABCD4-226ENST00000556971 ZNF644Q9H582 1327 aaPredicted RBP20.46■□□□□ 0.87
ABCD4-226ENST00000556971 NCOA3Q9Y6Q9 1424 aa20.44■□□□□ 0.86
ABCD4-226ENST00000556971 UNC13BO14795 1591 aa20.44■□□□□ 0.86
ABCD4-226ENST00000556971 EFCAB6Q5THR3 1501 aa20.43■□□□□ 0.86
ABCD4-226ENST00000556971 BCANQ96GW7 911 aa20.43■□□□□ 0.86
ABCD4-226ENST00000556971 EHMT2Q96KQ7 1210 aa20.43■□□□□ 0.86
ABCD4-226ENST00000556971 STAG3Q9UJ98 1225 aa20.43■□□□□ 0.86
ABCD4-226ENST00000556971 R3HDM1Q15032 1099 aaKnown RBP20.42■□□□□ 0.86
ABCD4-226ENST00000556971 FNBP4Q8N3X1 1017 aaPredicted RBP20.41■□□□□ 0.86
ABCD4-226ENST00000556971 CCNB3Q8WWL7 1395 aa20.41■□□□□ 0.86
ABCD4-226ENST00000556971 BRWD3Q6RI45 1802 aa20.4■□□□□ 0.86
ABCD4-226ENST00000556971 DDX17Q92841 729 aaKnown RBP20.4■□□□□ 0.86
ABCD4-226ENST00000556971 C19orf44Q9H6X5 657 aa20.4■□□□□ 0.86
ABCD4-226ENST00000556971 CEP350Q5VT06 3117 aa20.38■□□□□ 0.85
ABCD4-226ENST00000556971 DCAF8L1A6NGE4 600 aa20.35■□□□□ 0.85
ABCD4-226ENST00000556971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.34■□□□□ 0.853e-10■■□□□ 14.5
ABCD4-226ENST00000556971 PTCH1Q13635 1447 aa20.34■□□□□ 0.85
ABCD4-226ENST00000556971 SPHKAPQ2M3C7 1700 aa20.33■□□□□ 0.85
ABCD4-226ENST00000556971 CCDC141Q6ZP82 1450 aa20.33■□□□□ 0.85
ABCD4-226ENST00000556971 GJD4Q96KN9 370 aaPredicted RBP20.33■□□□□ 0.85
ABCD4-226ENST00000556971 CAMTA1Q9Y6Y1 1673 aa20.32■□□□□ 0.84
ABCD4-226ENST00000556971 BAG6P46379 1132 aa20.32■□□□□ 0.84
ABCD4-226ENST00000556971 CASKIN1Q8WXD9 1431 aa20.31■□□□□ 0.84
ABCD4-226ENST00000556971 GLI3P10071 1580 aa20.29■□□□□ 0.84
ABCD4-226ENST00000556971 MST1RQ04912 1400 aa20.29■□□□□ 0.84
ABCD4-226ENST00000556971 RALGAPBQ86X10 1494 aa20.27■□□□□ 0.84
ABCD4-226ENST00000556971 DCCP43146 1447 aa20.26■□□□□ 0.83
ABCD4-226ENST00000556971 ADGRB3O60242 1522 aa20.25■□□□□ 0.83
ABCD4-226ENST00000556971 ARHGAP31Q2M1Z3 1444 aa20.25■□□□□ 0.83
ABCD4-226ENST00000556971 EIF2AK4Q9P2K8 1649 aaKnown RBP20.24■□□□□ 0.83
ABCD4-226ENST00000556971 EN1Q05925 392 aaPredicted RBP20.24■□□□□ 0.83
ABCD4-226ENST00000556971 PLEKHG1Q9ULL1 1385 aa20.23■□□□□ 0.83
ABCD4-226ENST00000556971 IDI1Q13907 227 aa20.23■□□□□ 0.83
ABCD4-226ENST00000556971 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.22■□□□□ 0.83
ABCD4-226ENST00000556971 PPP1R1BQ9UD71 204 aaPredicted RBP20.21■□□□□ 0.83
ABCD4-226ENST00000556971 NINLQ9Y2I6 1382 aa20.21■□□□□ 0.83
ABCD4-226ENST00000556971 MARF1Q9Y4F3 1742 aaKnown RBP20.2■□□□□ 0.82
ABCD4-226ENST00000556971 SEPT12Q8IYM1 358 aa20.19■□□□□ 0.82
ABCD4-226ENST00000556971 EEA1Q15075 1411 aa20.19■□□□□ 0.82
ABCD4-226ENST00000556971 PPP1R15AO75807 674 aaPredicted RBP20.18■□□□□ 0.82
ABCD4-226ENST00000556971 COL22A1Q8NFW1 1626 aaPredicted RBP20.17■□□□□ 0.82
ABCD4-226ENST00000556971 ZFYVE9O95405 1425 aa20.16■□□□□ 0.82
ABCD4-226ENST00000556971 MYOM2P54296 1465 aa20.16■□□□□ 0.82
ABCD4-226ENST00000556971 FYCO1Q9BQS8 1478 aa20.16■□□□□ 0.82
ABCD4-226ENST00000556971 TBX22Q9Y458 520 aa20.15■□□□□ 0.82
ABCD4-226ENST00000556971 UBTFP17480 764 aaKnown RBP20.14■□□□□ 0.81
ABCD4-226ENST00000556971 KRT27Q7Z3Y8 459 aa20.14■□□□□ 0.81
ABCD4-226ENST00000556971 UTRNP46939 3433 aa20.14■□□□□ 0.81
ABCD4-226ENST00000556971 RGPD1P0DJD0 1748 aa20.13■□□□□ 0.81
ABCD4-226ENST00000556971 TRPM2O94759 1503 aa20.13■□□□□ 0.81
ABCD4-226ENST00000556971 LAMC1P11047 1609 aa20.12■□□□□ 0.81
ABCD4-226ENST00000556971 ADAMTS13Q76LX8 1427 aa20.11■□□□□ 0.81
ABCD4-226ENST00000556971 MYO5BQ9ULV0 1848 aa20.11■□□□□ 0.81
ABCD4-226ENST00000556971 MTUS2Q5JR59 1369 aa20.1■□□□□ 0.81
ABCD4-226ENST00000556971 GIGYF1O75420 1035 aaPredicted RBP20.1■□□□□ 0.81
ABCD4-226ENST00000556971 UNC5CLQ8IV45 518 aa20.1■□□□□ 0.81
ABCD4-226ENST00000556971 EHBP1L1Q8N3D4 1523 aa20.1■□□□□ 0.81
ABCD4-226ENST00000556971 RIMS2Q9UQ26 1411 aa20.1■□□□□ 0.81
ABCD4-226ENST00000556971 CHD4Q14839 1912 aa20.1■□□□□ 0.81
ABCD4-226ENST00000556971 SOS2Q07890 1332 aaPredicted RBP20.09■□□□□ 0.81
ABCD4-226ENST00000556971 SLC34A2O95436 690 aa20.08■□□□□ 0.81
ABCD4-226ENST00000556971 EZH2Q15910 746 aaKnown RBP20.08■□□□□ 0.81
ABCD4-226ENST00000556971 PTPRUQ92729 1446 aa20.08■□□□□ 0.8
ABCD4-226ENST00000556971 PIK3R4Q99570 1358 aa20.08■□□□□ 0.8
ABCD4-226ENST00000556971 AMOTL2Q9Y2J4 779 aa20.07■□□□□ 0.8
ABCD4-226ENST00000556971 ARHGEF5Q12774 1597 aa20.07■□□□□ 0.8
ABCD4-226ENST00000556971 TNS1Q9HBL0 1735 aaKnown RBP20.07■□□□□ 0.8
ABCD4-226ENST00000556971 DISP2A7MBM2 1401 aa20.06■□□□□ 0.8
ABCD4-226ENST00000556971 TSPY4P0CV99 314 aa20.06■□□□□ 0.8
ABCD4-226ENST00000556971 TSPY10P0CW01 314 aa20.06■□□□□ 0.8
ABCD4-226ENST00000556971 RSPH4AQ5TD94 716 aa20.06■□□□□ 0.8
ABCD4-226ENST00000556971 SPON1Q9HCB6 807 aa20.05■□□□□ 0.8
ABCD4-226ENST00000556971 SLIT2O94813 1529 aa20.05■□□□□ 0.8
ABCD4-226ENST00000556971 CAPN15O75808 1086 aa20.03■□□□□ 0.8
ABCD4-226ENST00000556971 C1orf167Q5SNV9 1468 aa20.03■□□□□ 0.8
ABCD4-226ENST00000556971 GCC2Q8IWJ2 1684 aa20.01■□□□□ 0.79
ABCD4-226ENST00000556971 A0A0G2JS52 829 aa20.01■□□□□ 0.79
ABCD4-226ENST00000556971 MYT1Q01538 1121 aa20.01■□□□□ 0.79
ABCD4-226ENST00000556971 NALCNQ8IZF0 1738 aa20.01■□□□□ 0.79
ABCD4-226ENST00000556971 XRN1Q8IZH2 1706 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms