RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 TXNDC2Q86VQ3 553 aa29.7■■■□□ 2.35
RCCD1-205ENST00000556333 CCDC144AA2RUR9 1427 aa29.7■■■□□ 2.34
RCCD1-205ENST00000556333 ZNF326Q5BKZ1 582 aaKnown RBP29.68■■■□□ 2.34
RCCD1-205ENST00000556333 PCGF6Q9BYE7 350 aa29.66■■■□□ 2.34
RCCD1-205ENST00000556333 NPHP4O75161 1426 aaPredicted RBP29.65■■■□□ 2.34
RCCD1-205ENST00000556333 RIMS2Q9UQ26 1411 aa29.65■■■□□ 2.34
RCCD1-205ENST00000556333 LTKP29376 864 aa29.65■■■□□ 2.34
RCCD1-205ENST00000556333 HDGFP51858 240 aaKnown RBP29.64■■■□□ 2.34
RCCD1-205ENST00000556333 MED14O60244 1454 aa29.63■■■□□ 2.33
RCCD1-205ENST00000556333 PPP1R15AO75807 674 aaPredicted RBP29.63■■■□□ 2.33
RCCD1-205ENST00000556333 ZFYVE9O95405 1425 aa29.61■■■□□ 2.33
RCCD1-205ENST00000556333 NUTM2DQ5VT03 806 aaPredicted RBP29.6■■■□□ 2.33
RCCD1-205ENST00000556333 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.59■■■□□ 2.33
RCCD1-205ENST00000556333 BCANQ96GW7 911 aa29.59■■■□□ 2.33
RCCD1-205ENST00000556333 SENP3Q9H4L4 574 aaPredicted RBP29.58■■■□□ 2.33
RCCD1-205ENST00000556333 ANKRD30BQ9BXX2 1392 aa29.57■■■□□ 2.32
RCCD1-205ENST00000556333 PPLO60437 1756 aa29.56■■■□□ 2.32
RCCD1-205ENST00000556333 NEXMIFQ5QGS0 1516 aa29.55■■■□□ 2.32
RCCD1-205ENST00000556333 LTBP4Q8N2S1 1624 aa29.54■■■□□ 2.32
RCCD1-205ENST00000556333 RGL3Q3MIN7 710 aa29.53■■■□□ 2.32
RCCD1-205ENST00000556333 IQSEC2Q5JU85 1478 aa29.53■■■□□ 2.32
RCCD1-205ENST00000556333 IFT172Q9UG01 1749 aa29.5■■■□□ 2.31
RCCD1-205ENST00000556333 PLEKHG1Q9ULL1 1385 aa29.5■■■□□ 2.31
RCCD1-205ENST00000556333 SPATA31E1Q6ZUB1 1445 aa29.48■■■□□ 2.31
RCCD1-205ENST00000556333 DHX57Q6P158 1386 aaKnown RBP29.48■■■□□ 2.31
RCCD1-205ENST00000556333 RPGRIP1LQ68CZ1 1315 aa29.46■■■□□ 2.31
RCCD1-205ENST00000556333 ZNF335Q9H4Z2 1342 aaPredicted RBP29.46■■■□□ 2.31
RCCD1-205ENST00000556333 SLC26A8Q96RN1 970 aa29.46■■■□□ 2.31
RCCD1-205ENST00000556333 VGFO15240 615 aaPredicted RBP29.42■■■□□ 2.3
RCCD1-205ENST00000556333 STRCP1A6NGW2 1772 aa29.41■■■□□ 2.3
RCCD1-205ENST00000556333 UBAP1LF5GYI3 381 aa29.4■■■□□ 2.3
RCCD1-205ENST00000556333 NRXN3Q9Y4C0 1643 aa29.39■■■□□ 2.3
RCCD1-205ENST00000556333 DIP2AQ14689 1571 aa29.39■■■□□ 2.29
RCCD1-205ENST00000556333 SETBP1Q9Y6X0 1596 aa29.38■■■□□ 2.29
RCCD1-205ENST00000556333 CHD2O14647 1828 aaKnown RBP29.36■■■□□ 2.29
RCCD1-205ENST00000556333 ADAMTS13Q76LX8 1427 aa29.35■■■□□ 2.29
RCCD1-205ENST00000556333 CPS1P31327 1500 aa29.32■■■□□ 2.28
RCCD1-205ENST00000556333 NEUROD1Q13562 356 aa29.32■■■□□ 2.28
RCCD1-205ENST00000556333 SIN3AQ96ST3 1273 aa29.32■■■□□ 2.28
RCCD1-205ENST00000556333 TBX22Q9Y458 520 aa29.32■■■□□ 2.28
RCCD1-205ENST00000556333 ADGRF5Q8IZF2 1346 aa29.3■■■□□ 2.28
RCCD1-205ENST00000556333 DCAF11Q8TEB1 546 aa29.29■■■□□ 2.28
RCCD1-205ENST00000556333 KDM2AQ9Y2K7 1162 aa29.29■■■□□ 2.28
RCCD1-205ENST00000556333 SETD1AO15047 1707 aaKnown RBP29.28■■■□□ 2.28
RCCD1-205ENST00000556333 ALKQ9UM73 1620 aa29.28■■■□□ 2.28
RCCD1-205ENST00000556333 MYOM2P54296 1465 aa29.27■■■□□ 2.28
RCCD1-205ENST00000556333 NWD1Q149M9 1564 aa29.26■■■□□ 2.28
RCCD1-205ENST00000556333 KCNA6P17658 529 aa29.26■■■□□ 2.27
RCCD1-205ENST00000556333 PIK3R4Q99570 1358 aa29.23■■■□□ 2.27
RCCD1-205ENST00000556333 PIK3C2GO75747 1445 aa29.21■■■□□ 2.27
RCCD1-205ENST00000556333 XIRP1Q702N8 1843 aaKnown RBP29.21■■■□□ 2.27
RCCD1-205ENST00000556333 METP08581 1390 aa29.21■■■□□ 2.27
RCCD1-205ENST00000556333 LAMC1P11047 1609 aa29.2■■■□□ 2.27
RCCD1-205ENST00000556333 LRRC7Q96NW7 1537 aa29.19■■■□□ 2.26
RCCD1-205ENST00000556333 NKTRP30414 1462 aaKnown RBP29.18■■■□□ 2.26
RCCD1-205ENST00000556333 NRXN1Q9ULB1 1477 aa29.18■■■□□ 2.26
RCCD1-205ENST00000556333 XRN1Q8IZH2 1706 aaKnown RBP29.17■■■□□ 2.26
RCCD1-205ENST00000556333 PROSER2Q86WR7 435 aaPredicted RBP29.17■■■□□ 2.26
RCCD1-205ENST00000556333 STAC3Q96MF2 364 aa29.17■■■□□ 2.26
RCCD1-205ENST00000556333 AMOTL2Q9Y2J4 779 aa29.17■■■□□ 2.26
RCCD1-205ENST00000556333 PTPRUQ92729 1446 aa29.17■■■□□ 2.26
RCCD1-205ENST00000556333 CCER1Q8TC90 406 aaPredicted RBP29.12■■■□□ 2.25
RCCD1-205ENST00000556333 L3MBTL2Q969R5 705 aa29.12■■■□□ 2.25
RCCD1-205ENST00000556333 RBM33Q96EV2 1170 aaKnown RBP29.12■■■□□ 2.25
RCCD1-205ENST00000556333 SCAF1Q9H7N4 1312 aaKnown RBP29.12■■■□□ 2.25
RCCD1-205ENST00000556333 TOM1O60784 492 aa29.11■■■□□ 2.25
RCCD1-205ENST00000556333 CFAP70Q5T0N1 1121 aa29.11■■■□□ 2.25
RCCD1-205ENST00000556333 HSPA1LP34931 641 aa29.1■■■□□ 2.25
RCCD1-205ENST00000556333 PIP4K2BP78356 416 aa29.1■■■□□ 2.25
RCCD1-205ENST00000556333 C14orf93Q9H972 538 aaKnown RBP29.1■■■□□ 2.25
RCCD1-205ENST00000556333 TONSLQ96HA7 1378 aa29.1■■■□□ 2.25
RCCD1-205ENST00000556333 TMEM132EQ6IEE7 984 aa29.09■■■□□ 2.25
RCCD1-205ENST00000556333 TMEM94Q12767 1356 aa29.09■■■□□ 2.25
RCCD1-205ENST00000556333 ASXL1Q8IXJ9 1541 aa29.08■■■□□ 2.25
RCCD1-205ENST00000556333 KNDC1Q76NI1 1749 aa29.06■■■□□ 2.24
RCCD1-205ENST00000556333 C14orf37Q86TY3 774 aa29.05■■■□□ 2.24
RCCD1-205ENST00000556333 STK26Q9P289 416 aa29.05■■■□□ 2.24
RCCD1-205ENST00000556333 KIAA1210Q9ULL0 1709 aa29.05■■■□□ 2.24
RCCD1-205ENST00000556333 CLSPNQ9HAW4 1339 aa29.03■■■□□ 2.24
RCCD1-205ENST00000556333 PRAG1Q86YV5 1406 aa29.03■■■□□ 2.24
RCCD1-205ENST00000556333 YTHDC2Q9H6S0 1430 aaKnown RBP29.01■■■□□ 2.23
RCCD1-205ENST00000556333 LRPPRCP42704 1394 aaKnown RBP29■■■□□ 2.23
RCCD1-205ENST00000556333 MSH6P52701 1360 aa28.99■■■□□ 2.23
RCCD1-205ENST00000556333 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.98■■■□□ 2.23
RCCD1-205ENST00000556333 PTCH1Q13635 1447 aa28.98■■■□□ 2.23
RCCD1-205ENST00000556333 NALCNQ8IZF0 1738 aa28.97■■■□□ 2.23
RCCD1-205ENST00000556333 ADGRB1O14514 1584 aa28.96■■■□□ 2.23
RCCD1-205ENST00000556333 NCOA3Q9Y6Q9 1424 aa28.96■■■□□ 2.23
RCCD1-205ENST00000556333 TRPM1Q7Z4N2 1603 aa28.96■■■□□ 2.23
RCCD1-205ENST00000556333 ROBO2Q9HCK4 1378 aa28.96■■■□□ 2.23
RCCD1-205ENST00000556333 MED1Q15648 1581 aaPredicted RBP28.94■■■□□ 2.22
RCCD1-205ENST00000556333 ABCC11Q96J66 1382 aa28.94■■■□□ 2.22
RCCD1-205ENST00000556333 TECPR2O15040 1411 aa28.93■■■□□ 2.22
RCCD1-205ENST00000556333 PHF23Q9BUL5 403 aaPredicted RBP28.91■■■□□ 2.22
RCCD1-205ENST00000556333 TRAK1Q9UPV9 953 aa28.91■■■□□ 2.22
RCCD1-205ENST00000556333 C19orf44Q9H6X5 657 aa28.9■■■□□ 2.22
RCCD1-205ENST00000556333 ARHGEF28Q8N1W1 1705 aaKnown RBP28.89■■■□□ 2.22
RCCD1-205ENST00000556333 NBPF1Q3BBV0 1214 aa28.89■■■□□ 2.22
RCCD1-205ENST00000556333 WAPLQ7Z5K2 1190 aa28.89■■■□□ 2.22
RCCD1-205ENST00000556333 ADGRL3Q9HAR2 1447 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms