RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 SCAPERQ9BY12 1400 aa14.11□□□□□ -0.15
MTHFD1-210ENST00000555252 FANCAO15360 1455 aa14.11□□□□□ -0.15
MTHFD1-210ENST00000555252 ATP7AQ04656 1500 aa14.11□□□□□ -0.15
MTHFD1-210ENST00000555252 MADDQ8WXG6 1647 aa14.11□□□□□ -0.15
MTHFD1-210ENST00000555252 SPHKAPQ2M3C7 1700 aa14.11□□□□□ -0.15
MTHFD1-210ENST00000555252 VWDEQ8N2E2 1590 aa14.1□□□□□ -0.15
MTHFD1-210ENST00000555252 DISP3Q9P2K9 1392 aa14.1□□□□□ -0.15
MTHFD1-210ENST00000555252 AFAP1Q8N556 730 aa14.1□□□□□ -0.15
MTHFD1-210ENST00000555252 RCAN3Q9UKA8 241 aa14.1□□□□□ -0.15
MTHFD1-210ENST00000555252 CDCA8Q53HL2 280 aa14.09□□□□□ -0.15
MTHFD1-210ENST00000555252 ANO8Q9HCE9 1232 aaPredicted RBP14.09□□□□□ -0.15
MTHFD1-210ENST00000555252 CYB5RLQ6IPT4 315 aa14.08□□□□□ -0.15
MTHFD1-210ENST00000555252 IQGAP1P46940 1657 aa14.08□□□□□ -0.16
MTHFD1-210ENST00000555252 SLC24A1O60721 1099 aa14.07□□□□□ -0.16
MTHFD1-210ENST00000555252 ADGRL1O94910 1474 aa14.06□□□□□ -0.16
MTHFD1-210ENST00000555252 KIAA1210Q9ULL0 1709 aa14.06□□□□□ -0.16
MTHFD1-210ENST00000555252 SCAF11Q99590 1463 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-210ENST00000555252 VIRMAQ69YN4 1812 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-210ENST00000555252 IL27Q8NEV9 243 aa14.06□□□□□ -0.16
MTHFD1-210ENST00000555252 EXOC6Q8TAG9 804 aa14.06□□□□□ -0.16
MTHFD1-210ENST00000555252 PANK3Q9H999 370 aa14.06□□□□□ -0.16
MTHFD1-210ENST00000555252 CLTCL1P53675 1640 aa14.06□□□□□ -0.16
MTHFD1-210ENST00000555252 SALL2Q9Y467 1007 aaPredicted RBP14.05□□□□□ -0.16
MTHFD1-210ENST00000555252 EIF3AQ14152 1382 aaKnown RBP14.04□□□□□ -0.16
MTHFD1-210ENST00000555252 BLMP54132 1417 aaPredicted RBP14.03□□□□□ -0.16
MTHFD1-210ENST00000555252 ASXL2Q76L83 1435 aa14.03□□□□□ -0.16
MTHFD1-210ENST00000555252 SYNMO15061 1565 aa14.02□□□□□ -0.16
MTHFD1-210ENST00000555252 NPM2Q86SE8 214 aaKnown RBP14.02□□□□□ -0.16
MTHFD1-210ENST00000555252 MYOM2P54296 1465 aa14.02□□□□□ -0.17
MTHFD1-210ENST00000555252 GSE1Q14687 1217 aa14.02□□□□□ -0.17
MTHFD1-210ENST00000555252 KIF3BO15066 747 aa14.01□□□□□ -0.17
MTHFD1-210ENST00000555252 LMTK2Q8IWU2 1503 aa14.01□□□□□ -0.17
MTHFD1-210ENST00000555252 MROH1Q8NDA8 1641 aa14.01□□□□□ -0.17
MTHFD1-210ENST00000555252 LAS1LQ9Y4W2 734 aaKnown RBP14□□□□□ -0.17
MTHFD1-210ENST00000555252 CFAP74Q9C0B2 1584 aa14□□□□□ -0.17
MTHFD1-210ENST00000555252 CC2D1BQ5T0F9 858 aaKnown RBP14□□□□□ -0.17
MTHFD1-210ENST00000555252 ZNF518AQ6AHZ1 1483 aa14□□□□□ -0.17
MTHFD1-210ENST00000555252 EFCAB6Q5THR3 1501 aa13.99□□□□□ -0.17
MTHFD1-210ENST00000555252 KNSTRNQ9Y448 316 aa13.99□□□□□ -0.17
MTHFD1-210ENST00000555252 NPC1L1Q9UHC9 1359 aa13.99□□□□□ -0.17
MTHFD1-210ENST00000555252 NPM1P06748 294 aaKnown RBP eCLIP13.98□□□□□ -0.17
MTHFD1-210ENST00000555252 MAP3K4Q9Y6R4 1608 aa13.98□□□□□ -0.17
MTHFD1-210ENST00000555252 KIDINS220Q9ULH0 1771 aa13.97□□□□□ -0.17
MTHFD1-210ENST00000555252 KIF1BO60333 1816 aa13.96□□□□□ -0.17
MTHFD1-210ENST00000555252 ASXL1Q8IXJ9 1541 aa13.96□□□□□ -0.17
MTHFD1-210ENST00000555252 NFKBIBQ15653 356 aa13.95□□□□□ -0.18
MTHFD1-210ENST00000555252 KDM5AP29375 1690 aaKnown RBP13.94□□□□□ -0.18
MTHFD1-210ENST00000555252 NRXN1Q9ULB1 1477 aa13.94□□□□□ -0.18
MTHFD1-210ENST00000555252 CENPQQ7L2Z9 268 aaPredicted RBP13.94□□□□□ -0.18
MTHFD1-210ENST00000555252 IFT172Q9UG01 1749 aa13.94□□□□□ -0.18
MTHFD1-210ENST00000555252 MLH3Q9UHC1 1453 aa13.94□□□□□ -0.18
MTHFD1-210ENST00000555252 PIK3C2GO75747 1445 aa13.94□□□□□ -0.18
MTHFD1-210ENST00000555252 KDM2BQ8NHM5 1336 aa13.94□□□□□ -0.18
MTHFD1-210ENST00000555252 AMER1Q5JTC6 1135 aaPredicted RBP13.94□□□□□ -0.18
MTHFD1-210ENST00000555252 PPP2R1AP30153 589 aa13.93□□□□□ -0.18
MTHFD1-210ENST00000555252 UBE2Q2Q8WVN8 375 aa13.93□□□□□ -0.18
MTHFD1-210ENST00000555252 DAXXQ9UER7 740 aaPredicted RBP13.93□□□□□ -0.18
MTHFD1-210ENST00000555252 PPRC1Q5VV67 1664 aaKnown RBP13.92□□□□□ -0.18
MTHFD1-210ENST00000555252 ABCA6Q8N139 1617 aa13.92□□□□□ -0.18
MTHFD1-210ENST00000555252 POGZQ7Z3K3 1410 aa13.91□□□□□ -0.18
MTHFD1-210ENST00000555252 SBNO2Q9Y2G9 1366 aa13.91□□□□□ -0.18
MTHFD1-210ENST00000555252 SETBP1Q9Y6X0 1596 aa13.91□□□□□ -0.18
MTHFD1-210ENST00000555252 WDR43Q15061 677 aaKnown RBP eCLIP13.91□□□□□ -0.18
MTHFD1-210ENST00000555252 MYOM1P52179 1685 aa13.91□□□□□ -0.18
MTHFD1-210ENST00000555252 CD109Q6YHK3 1445 aa13.91□□□□□ -0.18
MTHFD1-210ENST00000555252 ADGRB3O60242 1522 aa13.91□□□□□ -0.18
MTHFD1-210ENST00000555252 FAM161AQ3B820 660 aa13.91□□□□□ -0.18
MTHFD1-210ENST00000555252 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.18
MTHFD1-210ENST00000555252 RTN4Q9NQC3 1192 aaKnown RBP13.9□□□□□ -0.18
MTHFD1-210ENST00000555252 CRBNQ96SW2 442 aa13.89□□□□□ -0.19
MTHFD1-210ENST00000555252 HECW2Q9P2P5 1572 aa13.89□□□□□ -0.19
MTHFD1-210ENST00000555252 SENP3-EIF4A1A0A087X0R7 540 aa13.89□□□□□ -0.19
MTHFD1-210ENST00000555252 CFAP70Q5T0N1 1121 aa13.89□□□□□ -0.19
MTHFD1-210ENST00000555252 ERVK-7P63135 1459 aa13.88□□□□□ -0.19
MTHFD1-210ENST00000555252 RPGRIP1LQ68CZ1 1315 aa13.88□□□□□ -0.19
MTHFD1-210ENST00000555252 ADGRF5Q8IZF2 1346 aa13.88□□□□□ -0.19
MTHFD1-210ENST00000555252 UGGT1Q9NYU2 1555 aa13.88□□□□□ -0.19
MTHFD1-210ENST00000555252 FAM43AQ8N2R8 423 aa13.88□□□□□ -0.19
MTHFD1-210ENST00000555252 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.87□□□□□ -0.19
MTHFD1-210ENST00000555252 RSPH6AQ9H0K4 717 aa13.87□□□□□ -0.19
MTHFD1-210ENST00000555252 ADAMTS8Q9UP79 889 aa13.87□□□□□ -0.19
MTHFD1-210ENST00000555252 MROH2AA6NES4 1674 aa13.87□□□□□ -0.19
MTHFD1-210ENST00000555252 NEO1Q92859 1461 aa13.87□□□□□ -0.19
MTHFD1-210ENST00000555252 FRAT1Q92837 279 aaPredicted RBP13.86□□□□□ -0.19
MTHFD1-210ENST00000555252 CDCA7LQ96GN5 454 aa13.86□□□□□ -0.19
MTHFD1-210ENST00000555252 FRMPD1Q5SYB0 1578 aa13.86□□□□□ -0.19
MTHFD1-210ENST00000555252 NGEFQ8N5V2 710 aa13.86□□□□□ -0.19
MTHFD1-210ENST00000555252 BRPF3Q9ULD4 1205 aa13.86□□□□□ -0.19
MTHFD1-210ENST00000555252 NOS1P29475 1434 aa13.84□□□□□ -0.19
MTHFD1-210ENST00000555252 NPATQ14207 1427 aa13.84□□□□□ -0.19
MTHFD1-210ENST00000555252 C8orf34Q49A92 452 aa13.84□□□□□ -0.19
MTHFD1-210ENST00000555252 C14orf93Q9H972 538 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-210ENST00000555252 ZNF521Q96K83 1311 aa13.83□□□□□ -0.2
MTHFD1-210ENST00000555252 CENPJQ9HC77 1338 aaPredicted RBP13.83□□□□□ -0.2
MTHFD1-210ENST00000555252 ABCC3O15438 1527 aa13.83□□□□□ -0.2
MTHFD1-210ENST00000555252 PPLO60437 1756 aa13.83□□□□□ -0.2
MTHFD1-210ENST00000555252 GOLGA2Q08379 1002 aa13.82□□□□□ -0.2
MTHFD1-210ENST00000555252 PUS7Q96PZ0 661 aaKnown RBP13.81□□□□□ -0.2
MTHFD1-210ENST00000555252 PLIN1O60240 522 aa13.81□□□□□ -0.2
MTHFD1-210ENST00000555252 CAMSAP1Q5T5Y3 1602 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms