RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 TRPM2O94759 1503 aa20.28■□□□□ 0.84
NUMB-209ENST00000554315 TMEM131LA2VDJ0 1609 aa20.27■□□□□ 0.84
NUMB-209ENST00000554315 RPGRIP1LQ68CZ1 1315 aa20.25■□□□□ 0.83
NUMB-209ENST00000554315 CCDC144AA2RUR9 1427 aa20.24■□□□□ 0.83
NUMB-209ENST00000554315 ZFYVE9O95405 1425 aa20.24■□□□□ 0.83
NUMB-209ENST00000554315 PLEKHG1Q9ULL1 1385 aa20.24■□□□□ 0.83
NUMB-209ENST00000554315 FBXO41Q8TF61 875 aa20.24■□□□□ 0.83
NUMB-209ENST00000554315 SLC26A8Q96RN1 970 aa20.24■□□□□ 0.83
NUMB-209ENST00000554315 IQGAP1P46940 1657 aa20.23■□□□□ 0.83
NUMB-209ENST00000554315 VGFO15240 615 aaPredicted RBP20.23■□□□□ 0.83
NUMB-209ENST00000554315 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
NUMB-209ENST00000554315 TBX22Q9Y458 520 aa20.22■□□□□ 0.83
NUMB-209ENST00000554315 LTBP4Q8N2S1 1624 aa20.2■□□□□ 0.83
NUMB-209ENST00000554315 KCNA6P17658 529 aa20.19■□□□□ 0.82
NUMB-209ENST00000554315 CLTCL1P53675 1640 aa20.18■□□□□ 0.82
NUMB-209ENST00000554315 RGL3Q3MIN7 710 aa20.18■□□□□ 0.82
NUMB-209ENST00000554315 CPS1P31327 1500 aa20.18■□□□□ 0.82
NUMB-209ENST00000554315 IQSEC2Q5JU85 1478 aa20.16■□□□□ 0.82
NUMB-209ENST00000554315 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
NUMB-209ENST00000554315 KIF1BO60333 1816 aa20.16■□□□□ 0.82
NUMB-209ENST00000554315 MYO5BQ9ULV0 1848 aa20.16■□□□□ 0.82
NUMB-209ENST00000554315 ILDR1Q86SU0 546 aaPredicted RBP20.16■□□□□ 0.82
NUMB-209ENST00000554315 ANKRD30BQ9BXX2 1392 aa20.14■□□□□ 0.82
NUMB-209ENST00000554315 PIK3R4Q99570 1358 aa20.12■□□□□ 0.81
NUMB-209ENST00000554315 PROSER2Q86WR7 435 aaPredicted RBP20.11■□□□□ 0.81
NUMB-209ENST00000554315 TOM1O60784 492 aa20.1■□□□□ 0.81
NUMB-209ENST00000554315 SPATA31E1Q6ZUB1 1445 aa20.09■□□□□ 0.81
NUMB-209ENST00000554315 UBAP1LF5GYI3 381 aa20.08■□□□□ 0.81
NUMB-209ENST00000554315 STAC3Q96MF2 364 aa20.08■□□□□ 0.81
NUMB-209ENST00000554315 ADAMTS13Q76LX8 1427 aa20.08■□□□□ 0.8
NUMB-209ENST00000554315 NEXMIFQ5QGS0 1516 aa20.07■□□□□ 0.8
NUMB-209ENST00000554315 AMOTL2Q9Y2J4 779 aa20.06■□□□□ 0.8
NUMB-209ENST00000554315 DIP2AQ14689 1571 aa20.06■□□□□ 0.8
NUMB-209ENST00000554315 LRRC7Q96NW7 1537 aa20.05■□□□□ 0.8
NUMB-209ENST00000554315 SETBP1Q9Y6X0 1596 aa20.03■□□□□ 0.8
NUMB-209ENST00000554315 ADGRF5Q8IZF2 1346 aa20.02■□□□□ 0.8
NUMB-209ENST00000554315 TMEM94Q12767 1356 aa20.01■□□□□ 0.79
NUMB-209ENST00000554315 NKTRP30414 1462 aaKnown RBP20■□□□□ 0.79
NUMB-209ENST00000554315 DCAF11Q8TEB1 546 aa19.99■□□□□ 0.79
NUMB-209ENST00000554315 NCOA3Q9Y6Q9 1424 aa19.99■□□□□ 0.79
NUMB-209ENST00000554315 C14orf37Q86TY3 774 aa19.99■□□□□ 0.79
NUMB-209ENST00000554315 METP08581 1390 aa19.99■□□□□ 0.79
NUMB-209ENST00000554315 STRCP1A6NGW2 1772 aa19.98■□□□□ 0.79
NUMB-209ENST00000554315 KDM2AQ9Y2K7 1162 aa19.97■□□□□ 0.79
NUMB-209ENST00000554315 CHD2O14647 1828 aaKnown RBP19.97■□□□□ 0.79
NUMB-209ENST00000554315 RBM33Q96EV2 1170 aaKnown RBP19.96■□□□□ 0.79
NUMB-209ENST00000554315 NWD1Q149M9 1564 aa19.96■□□□□ 0.79
NUMB-209ENST00000554315 PPLO60437 1756 aa19.96■□□□□ 0.79
NUMB-209ENST00000554315 PIP4K2BP78356 416 aa19.96■□□□□ 0.79
NUMB-209ENST00000554315 C19orf44Q9H6X5 657 aa19.96■□□□□ 0.79
NUMB-209ENST00000554315 C14orf93Q9H972 538 aaKnown RBP19.96■□□□□ 0.79
NUMB-209ENST00000554315 MSH6P52701 1360 aa19.95■□□□□ 0.78
NUMB-209ENST00000554315 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
NUMB-209ENST00000554315 PTPRUQ92729 1446 aa19.94■□□□□ 0.78
NUMB-209ENST00000554315 PCGF6Q9BYE7 350 aa19.93■□□□□ 0.78
NUMB-209ENST00000554315 ALKQ9UM73 1620 aa19.93■□□□□ 0.78
NUMB-209ENST00000554315 NRXN3Q9Y4C0 1643 aa19.93■□□□□ 0.78
NUMB-209ENST00000554315 DHX57Q6P158 1386 aaKnown RBP19.92■□□□□ 0.78
NUMB-209ENST00000554315 ATF3P18847 181 aa19.91■□□□□ 0.78
NUMB-209ENST00000554315 CADPS2Q86UW7 1296 aa19.91■□□□□ 0.78
NUMB-209ENST00000554315 MYOM2P54296 1465 aa19.91■□□□□ 0.78
NUMB-209ENST00000554315 PIK3C2GO75747 1445 aa19.91■□□□□ 0.78
NUMB-209ENST00000554315 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
NUMB-209ENST00000554315 CFAP70Q5T0N1 1121 aa19.9■□□□□ 0.78
NUMB-209ENST00000554315 TMEM132EQ6IEE7 984 aa19.89■□□□□ 0.77
NUMB-209ENST00000554315 SIN3AQ96ST3 1273 aa19.89■□□□□ 0.77
NUMB-209ENST00000554315 STK26Q9P289 416 aa19.89■□□□□ 0.77
NUMB-209ENST00000554315 SLAIN2Q9P270 581 aa19.88■□□□□ 0.77
NUMB-209ENST00000554315 NRXN1Q9ULB1 1477 aa19.88■□□□□ 0.77
NUMB-209ENST00000554315 SIRT1Q96EB6 747 aa19.88■□□□□ 0.77
NUMB-209ENST00000554315 IFT172Q9UG01 1749 aa19.86■□□□□ 0.77
NUMB-209ENST00000554315 LRPPRCP42704 1394 aaKnown RBP19.86■□□□□ 0.77
NUMB-209ENST00000554315 ABCC11Q96J66 1382 aa19.86■□□□□ 0.77
NUMB-209ENST00000554315 PTCH1Q13635 1447 aa19.83■□□□□ 0.77
NUMB-209ENST00000554315 L3MBTL2Q969R5 705 aa19.83■□□□□ 0.77
NUMB-209ENST00000554315 FAM135BQ49AJ0 1406 aa19.83■□□□□ 0.76
NUMB-209ENST00000554315 PRAG1Q86YV5 1406 aa19.83■□□□□ 0.76
NUMB-209ENST00000554315 ROBO2Q9HCK4 1378 aa19.82■□□□□ 0.76
NUMB-209ENST00000554315 XRN1Q8IZH2 1706 aaKnown RBP19.82■□□□□ 0.76
NUMB-209ENST00000554315 XIRP1Q702N8 1843 aaKnown RBP19.81■□□□□ 0.76
NUMB-209ENST00000554315 YTHDC2Q9H6S0 1430 aaKnown RBP19.81■□□□□ 0.76
NUMB-209ENST00000554315 DCCP43146 1447 aa19.79■□□□□ 0.76
NUMB-209ENST00000554315 SETD1AO15047 1707 aaKnown RBP19.79■□□□□ 0.76
NUMB-209ENST00000554315 TECPR2O15040 1411 aa19.79■□□□□ 0.76
NUMB-209ENST00000554315 HSPA1LP34931 641 aa19.79■□□□□ 0.76
NUMB-209ENST00000554315 WAPLQ7Z5K2 1190 aa19.79■□□□□ 0.76
NUMB-209ENST00000554315 POGKQ9P215 609 aa19.78■□□□□ 0.76
NUMB-209ENST00000554315 LAMC1P11047 1609 aa19.78■□□□□ 0.76
NUMB-209ENST00000554315 ADGRL3Q9HAR2 1447 aa19.77■□□□□ 0.76
NUMB-209ENST00000554315 TRAK1Q9UPV9 953 aa19.76■□□□□ 0.75
NUMB-209ENST00000554315 CLSPNQ9HAW4 1339 aa19.74■□□□□ 0.75
NUMB-209ENST00000554315 PRAM1Q96QH2 718 aa19.74■□□□□ 0.75
NUMB-209ENST00000554315 TONSLQ96HA7 1378 aa19.74■□□□□ 0.75
NUMB-209ENST00000554315 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.73■□□□□ 0.75
NUMB-209ENST00000554315 ASXL1Q8IXJ9 1541 aa19.71■□□□□ 0.75
NUMB-209ENST00000554315 NBPF1Q3BBV0 1214 aa19.69■□□□□ 0.74
NUMB-209ENST00000554315 BRINP3Q76B58 766 aa19.69■□□□□ 0.74
NUMB-209ENST00000554315 TIMELESSQ9UNS1 1208 aa19.69■□□□□ 0.74
NUMB-209ENST00000554315 SAFB2Q14151 953 aaKnown RBP eCLIP19.68■□□□□ 0.74
NUMB-209ENST00000554315 ADGRB1O14514 1584 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms