RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 CD109Q6YHK3 1445 aa11.42□□□□□ -0.58
CCNK-203ENST00000553865 DISP1Q96F81 1524 aa11.42□□□□□ -0.58
CCNK-203ENST00000553865 RPGRIP1LQ68CZ1 1315 aa11.42□□□□□ -0.58
CCNK-203ENST00000553865 POGZQ7Z3K3 1410 aa11.42□□□□□ -0.58
CCNK-203ENST00000553865 A0A0U1RQG5 324 aaPredicted RBP11.42□□□□□ -0.58
CCNK-203ENST00000553865 MLECQ14165 292 aa11.42□□□□□ -0.58
CCNK-203ENST00000553865 CLSTN1O94985 981 aa11.42□□□□□ -0.58
CCNK-203ENST00000553865 GBP4Q96PP9 640 aa11.42□□□□□ -0.58
CCNK-203ENST00000553865 IPO9Q96P70 1041 aaKnown RBP11.42□□□□□ -0.58
CCNK-203ENST00000553865 PLCH2O75038 1416 aa11.42□□□□□ -0.58
CCNK-203ENST00000553865 ADGRL1O94910 1474 aa11.41□□□□□ -0.58
CCNK-203ENST00000553865 PANK3Q9H999 370 aa11.41□□□□□ -0.58
CCNK-203ENST00000553865 CENPJQ9HC77 1338 aaPredicted RBP11.41□□□□□ -0.58
CCNK-203ENST00000553865 TEX14Q8IWB6 1497 aa11.41□□□□□ -0.58
CCNK-203ENST00000553865 HSP90AA2PQ14568 343 aaPredicted RBP11.41□□□□□ -0.58
CCNK-203ENST00000553865 ITPRIPQ8IWB1 547 aa11.41□□□□□ -0.58
CCNK-203ENST00000553865 WDR7Q9Y4E6 1490 aa11.4□□□□□ -0.58
CCNK-203ENST00000553865 ERBINQ96RT1 1412 aa11.4□□□□□ -0.59
CCNK-203ENST00000553865 CEP170Q5SW79 1584 aa11.39□□□□□ -0.59
CCNK-203ENST00000553865 NCOA1Q15788 1441 aa11.39□□□□□ -0.59
CCNK-203ENST00000553865 CCDC7Q96M83 1385 aa11.39□□□□□ -0.59
CCNK-203ENST00000553865 SYAP1Q96A49 352 aaPredicted RBP11.39□□□□□ -0.59
CCNK-203ENST00000553865 DUOX2Q9NRD8 1548 aa11.39□□□□□ -0.59
CCNK-203ENST00000553865 CNTLNQ9NXG0 1405 aa11.39□□□□□ -0.59
CCNK-203ENST00000553865 UHRF1BP1LA0JNW5 1464 aa11.38□□□□□ -0.59
CCNK-203ENST00000553865 TPM4P67936 248 aa11.38□□□□□ -0.59
CCNK-203ENST00000553865 SMC4Q9NTJ3 1288 aa11.38□□□□□ -0.59
CCNK-203ENST00000553865 SLC52A1Q9NWF4 448 aa11.38□□□□□ -0.59
CCNK-203ENST00000553865 LMOD3Q0VAK6 560 aa11.37□□□□□ -0.59
CCNK-203ENST00000553865 CCDC146Q8IYE0 955 aa11.37□□□□□ -0.59
CCNK-203ENST00000553865 FANCAO15360 1455 aa11.37□□□□□ -0.59
CCNK-203ENST00000553865 HTATSF1O43719 755 aaKnown RBP11.37□□□□□ -0.59
CCNK-203ENST00000553865 NGEFQ8N5V2 710 aa11.37□□□□□ -0.59
CCNK-203ENST00000553865 ANKRD30BQ9BXX2 1392 aa11.37□□□□□ -0.59
CCNK-203ENST00000553865 EVC2Q86UK5 1308 aa11.37□□□□□ -0.59
CCNK-203ENST00000553865 HDAC5Q9UQL6 1122 aa11.37□□□□□ -0.59
CCNK-203ENST00000553865 DENND4BO75064 1496 aaPredicted RBP11.37□□□□□ -0.59
CCNK-203ENST00000553865 RRP1P56182 461 aaKnown RBP11.37□□□□□ -0.59
CCNK-203ENST00000553865 RSPH6AQ9H0K4 717 aa11.37□□□□□ -0.59
CCNK-203ENST00000553865 CENPQQ7L2Z9 268 aaPredicted RBP11.36□□□□□ -0.59
CCNK-203ENST00000553865 RTEL1-TNFRSF6BF6WH68 1400 aa11.36□□□□□ -0.59
CCNK-203ENST00000553865 KIAA1211Q6ZU35 1233 aa11.36□□□□□ -0.59
CCNK-203ENST00000553865 GOLGA6L3A6NEY3 463 aa11.36□□□□□ -0.59
CCNK-203ENST00000553865 SOX12O15370 315 aa11.36□□□□□ -0.59
CCNK-203ENST00000553865 E9PSI1 815 aa11.35□□□□□ -0.59
CCNK-203ENST00000553865 VSIG10Q8N0Z9 540 aa11.35□□□□□ -0.59
CCNK-203ENST00000553865 GNL2Q13823 731 aaKnown RBP11.35□□□□□ -0.59
CCNK-203ENST00000553865 CFAP74Q9C0B2 1584 aa11.35□□□□□ -0.59
CCNK-203ENST00000553865 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
CCNK-203ENST00000553865 DNMT1P26358 1616 aaKnown RBP11.34□□□□□ -0.59
CCNK-203ENST00000553865 KIF7Q2M1P5 1343 aa11.34□□□□□ -0.59
CCNK-203ENST00000553865 AFAP1Q8N556 730 aa11.34□□□□□ -0.59
CCNK-203ENST00000553865 TRAK1Q9UPV9 953 aa11.34□□□□□ -0.59
CCNK-203ENST00000553865 CGNL1Q0VF96 1302 aa11.34□□□□□ -0.59
CCNK-203ENST00000553865 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
CCNK-203ENST00000553865 ZNF518AQ6AHZ1 1483 aa11.33□□□□□ -0.6
CCNK-203ENST00000553865 ADGRL2O95490 1459 aa11.33□□□□□ -0.6
CCNK-203ENST00000553865 PRM3Q9NNZ6 103 aa11.33□□□□□ -0.6
CCNK-203ENST00000553865 ASXL2Q76L83 1435 aa11.32□□□□□ -0.6
CCNK-203ENST00000553865 HMMRO75330 724 aa11.32□□□□□ -0.6
CCNK-203ENST00000553865 STK31Q9BXU1 1019 aa11.32□□□□□ -0.6
CCNK-203ENST00000553865 GZF1Q9H116 711 aaPredicted RBP11.32□□□□□ -0.6
CCNK-203ENST00000553865 ABCA8O94911 1581 aa11.32□□□□□ -0.6
CCNK-203ENST00000553865 DHX29Q7Z478 1369 aaKnown RBP11.31□□□□□ -0.6
CCNK-203ENST00000553865 ABCC10Q5T3U5 1492 aa11.31□□□□□ -0.6
CCNK-203ENST00000553865 FANCIQ9NVI1 1328 aa11.31□□□□□ -0.6
CCNK-203ENST00000553865 CCDC34Q96HJ3 373 aa11.31□□□□□ -0.6
CCNK-203ENST00000553865 FAM161AQ3B820 660 aa11.3□□□□□ -0.6
CCNK-203ENST00000553865 GPATCH3Q96I76 525 aa11.3□□□□□ -0.6
CCNK-203ENST00000553865 ARHGEF5Q12774 1597 aa11.3□□□□□ -0.6
CCNK-203ENST00000553865 PDE4AP27815 886 aa11.29□□□□□ -0.6
CCNK-203ENST00000553865 MFAP1P55081 439 aaKnown RBP11.29□□□□□ -0.6
CCNK-203ENST00000553865 EXOC6Q8TAG9 804 aa11.29□□□□□ -0.6
CCNK-203ENST00000553865 RPRD2Q5VT52 1461 aaKnown RBP11.29□□□□□ -0.6
CCNK-203ENST00000553865 TPM3P06753 285 aa11.29□□□□□ -0.6
CCNK-203ENST00000553865 CLUAP1Q96AJ1 413 aa11.29□□□□□ -0.6
CCNK-203ENST00000553865 SLKQ9H2G2 1235 aaPredicted RBP11.29□□□□□ -0.6
CCNK-203ENST00000553865 BRD4O60885 1362 aaPredicted RBP11.29□□□□□ -0.6
CCNK-203ENST00000553865 GPS2Q13227 327 aa11.29□□□□□ -0.6
CCNK-203ENST00000553865 FAM135AQ9P2D6 1515 aa11.29□□□□□ -0.6
CCNK-203ENST00000553865 CSB-PGBD3P0DP91 1061 aa11.28□□□□□ -0.6
CCNK-203ENST00000553865 NUTM2DQ5VT03 806 aaPredicted RBP11.28□□□□□ -0.6
CCNK-203ENST00000553865 APBB1O00213 710 aa11.28□□□□□ -0.6
CCNK-203ENST00000553865 CRBNQ96SW2 442 aa11.28□□□□□ -0.6
CCNK-203ENST00000553865 ADGBQ8N7X0 1667 aa11.28□□□□□ -0.6
CCNK-203ENST00000553865 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.6
CCNK-203ENST00000553865 ZKSCAN2Q63HK3 967 aa11.27□□□□□ -0.6
CCNK-203ENST00000553865 CSPP1Q1MSJ5 1256 aa11.27□□□□□ -0.6
CCNK-203ENST00000553865 ZNF771Q7L3S4 317 aaPredicted RBP11.27□□□□□ -0.61
CCNK-203ENST00000553865 CEP89Q96ST8 783 aa11.27□□□□□ -0.61
CCNK-203ENST00000553865 SYCP2Q9BX26 1530 aa11.26□□□□□ -0.61
CCNK-203ENST00000553865 RRP7AQ9Y3A4 280 aaKnown RBP11.26□□□□□ -0.61
CCNK-203ENST00000553865 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCNK-203ENST00000553865 APAF1O14727 1248 aa11.25□□□□□ -0.61
CCNK-203ENST00000553865 PLIN1O60240 522 aa11.25□□□□□ -0.61
CCNK-203ENST00000553865 GCC2Q8IWJ2 1684 aa11.25□□□□□ -0.61
CCNK-203ENST00000553865 CHD1O14646 1710 aa11.24□□□□□ -0.61
CCNK-203ENST00000553865 PHF14O94880 888 aa11.24□□□□□ -0.61
CCNK-203ENST00000553865 NGDNQ8NEJ9 315 aaKnown RBP11.24□□□□□ -0.61
CCNK-203ENST00000553865 ISY1Q9ULR0 285 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms