RNA–Protein interactions for RNA: ENST00000553446.1

LRP1-205, Transcript of LDL receptor related protein 1, humanhuman

TSL 5

Gene LRP1, Length 292 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-205ENST00000553446 ZFYVE9O95405 1425 aa10□□□□□ -0.81
LRP1-205ENST00000553446 MED14O60244 1454 aa10□□□□□ -0.81
LRP1-205ENST00000553446 SPHKAPQ2M3C7 1700 aa10□□□□□ -0.81
LRP1-205ENST00000553446 BCANQ96GW7 911 aa10□□□□□ -0.81
LRP1-205ENST00000553446 POLR1AO95602 1720 aaPredicted RBP9.99□□□□□ -0.81
LRP1-205ENST00000553446 IQSEC2Q5JU85 1478 aa9.99□□□□□ -0.81
LRP1-205ENST00000553446 TRPM2O94759 1503 aa9.99□□□□□ -0.81
LRP1-205ENST00000553446 ZNF326Q5BKZ1 582 aaKnown RBP9.99□□□□□ -0.81
LRP1-205ENST00000553446 MYO5BQ9ULV0 1848 aa9.98□□□□□ -0.81
LRP1-205ENST00000553446 PPP1R15AO75807 674 aaPredicted RBP9.98□□□□□ -0.81
LRP1-205ENST00000553446 RBM33Q96EV2 1170 aaKnown RBP9.98□□□□□ -0.81
LRP1-205ENST00000553446 IQGAP1P46940 1657 aa9.97□□□□□ -0.81
LRP1-205ENST00000553446 UBAP1LF5GYI3 381 aa9.97□□□□□ -0.81
LRP1-205ENST00000553446 RGL3Q3MIN7 710 aa9.97□□□□□ -0.81
LRP1-205ENST00000553446 PHF23Q9BUL5 403 aaPredicted RBP9.97□□□□□ -0.81
LRP1-205ENST00000553446 TRIM26Q12899 539 aaPredicted RBP9.96□□□□□ -0.82
LRP1-205ENST00000553446 KDM5AP29375 1690 aaKnown RBP9.95□□□□□ -0.82
LRP1-205ENST00000553446 CCDC144AA2RUR9 1427 aa9.94□□□□□ -0.82
LRP1-205ENST00000553446 ADAMTS13Q76LX8 1427 aa9.94□□□□□ -0.82
LRP1-205ENST00000553446 PLEKHG1Q9ULL1 1385 aa9.94□□□□□ -0.82
LRP1-205ENST00000553446 HRCP23327 699 aa9.94□□□□□ -0.82
LRP1-205ENST00000553446 STRCP1A6NGW2 1772 aa9.93□□□□□ -0.82
LRP1-205ENST00000553446 NEXMIFQ5QGS0 1516 aa9.93□□□□□ -0.82
LRP1-205ENST00000553446 ANKRD30BQ9BXX2 1392 aa9.93□□□□□ -0.82
LRP1-205ENST00000553446 SCAF1Q9H7N4 1312 aaKnown RBP9.93□□□□□ -0.82
LRP1-205ENST00000553446 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.93□□□□□ -0.82
LRP1-205ENST00000553446 SPATA31E1Q6ZUB1 1445 aa9.92□□□□□ -0.82
LRP1-205ENST00000553446 ADGRF5Q8IZF2 1346 aa9.92□□□□□ -0.82
LRP1-205ENST00000553446 HDGFP51858 240 aaKnown RBP9.91□□□□□ -0.82
LRP1-205ENST00000553446 PTPRUQ92729 1446 aa9.9□□□□□ -0.82
LRP1-205ENST00000553446 KCNA6P17658 529 aa9.9□□□□□ -0.82
LRP1-205ENST00000553446 TBX22Q9Y458 520 aa9.9□□□□□ -0.82
LRP1-205ENST00000553446 LRRC7Q96NW7 1537 aa9.9□□□□□ -0.82
LRP1-205ENST00000553446 METP08581 1390 aa9.89□□□□□ -0.83
LRP1-205ENST00000553446 NRXN3Q9Y4C0 1643 aa9.89□□□□□ -0.83
LRP1-205ENST00000553446 PROSER2Q86WR7 435 aaPredicted RBP9.89□□□□□ -0.83
LRP1-205ENST00000553446 SIN3AQ96ST3 1273 aa9.89□□□□□ -0.83
LRP1-205ENST00000553446 PCGF6Q9BYE7 350 aa9.89□□□□□ -0.83
LRP1-205ENST00000553446 KIF1BO60333 1816 aa9.89□□□□□ -0.83
LRP1-205ENST00000553446 TMEM94Q12767 1356 aa9.88□□□□□ -0.83
LRP1-205ENST00000553446 CPS1P31327 1500 aa9.88□□□□□ -0.83
LRP1-205ENST00000553446 HSPA1LP34931 641 aa9.88□□□□□ -0.83
LRP1-205ENST00000553446 AMOTL2Q9Y2J4 779 aa9.88□□□□□ -0.83
LRP1-205ENST00000553446 KDM2AQ9Y2K7 1162 aa9.88□□□□□ -0.83
LRP1-205ENST00000553446 RPGRIP1LQ68CZ1 1315 aa9.87□□□□□ -0.83
LRP1-205ENST00000553446 ACIN1Q9UKV3 1341 aaKnown RBP9.87□□□□□ -0.83
LRP1-205ENST00000553446 VGFO15240 615 aaPredicted RBP9.87□□□□□ -0.83
LRP1-205ENST00000553446 PIP4K2BP78356 416 aa9.87□□□□□ -0.83
LRP1-205ENST00000553446 DHX57Q6P158 1386 aaKnown RBP9.87□□□□□ -0.83
LRP1-205ENST00000553446 TMEM132EQ6IEE7 984 aa9.86□□□□□ -0.83
LRP1-205ENST00000553446 ALKQ9UM73 1620 aa9.85□□□□□ -0.83
LRP1-205ENST00000553446 SETD1AO15047 1707 aaKnown RBP9.85□□□□□ -0.83
LRP1-205ENST00000553446 SETBP1Q9Y6X0 1596 aa9.85□□□□□ -0.83
LRP1-205ENST00000553446 NEUROD1Q13562 356 aa9.85□□□□□ -0.83
LRP1-205ENST00000553446 DCAF11Q8TEB1 546 aa9.85□□□□□ -0.83
LRP1-205ENST00000553446 NWD1Q149M9 1564 aa9.84□□□□□ -0.83
LRP1-205ENST00000553446 PPLO60437 1756 aa9.84□□□□□ -0.83
LRP1-205ENST00000553446 CFAP70Q5T0N1 1121 aa9.84□□□□□ -0.83
LRP1-205ENST00000553446 STK26Q9P289 416 aa9.84□□□□□ -0.83
LRP1-205ENST00000553446 XIRP1Q702N8 1843 aaKnown RBP9.83□□□□□ -0.84
LRP1-205ENST00000553446 CHD2O14647 1828 aaKnown RBP9.82□□□□□ -0.84
LRP1-205ENST00000553446 ROBO2Q9HCK4 1378 aa9.82□□□□□ -0.84
LRP1-205ENST00000553446 DIP2AQ14689 1571 aa9.82□□□□□ -0.84
LRP1-205ENST00000553446 IFT172Q9UG01 1749 aa9.82□□□□□ -0.84
LRP1-205ENST00000553446 ASXL1Q8IXJ9 1541 aa9.82□□□□□ -0.84
LRP1-205ENST00000553446 PIK3C2GO75747 1445 aa9.82□□□□□ -0.84
LRP1-205ENST00000553446 NKTRP30414 1462 aaKnown RBP9.81□□□□□ -0.84
LRP1-205ENST00000553446 PIK3R4Q99570 1358 aa9.81□□□□□ -0.84
LRP1-205ENST00000553446 TOM1O60784 492 aa9.81□□□□□ -0.84
LRP1-205ENST00000553446 WAPLQ7Z5K2 1190 aa9.81□□□□□ -0.84
LRP1-205ENST00000553446 C14orf37Q86TY3 774 aa9.81□□□□□ -0.84
LRP1-205ENST00000553446 NRXN1Q9ULB1 1477 aa9.8□□□□□ -0.84
LRP1-205ENST00000553446 PLEKHH1Q9ULM0 1364 aa9.8□□□□□ -0.84
LRP1-205ENST00000553446 XRN1Q8IZH2 1706 aaKnown RBP9.8□□□□□ -0.84
LRP1-205ENST00000553446 L3MBTL2Q969R5 705 aa9.8□□□□□ -0.84
LRP1-205ENST00000553446 C14orf93Q9H972 538 aaKnown RBP9.8□□□□□ -0.84
LRP1-205ENST00000553446 MYOM2P54296 1465 aa9.79□□□□□ -0.84
LRP1-205ENST00000553446 MSH6P52701 1360 aa9.77□□□□□ -0.84
LRP1-205ENST00000553446 SAFB2Q14151 953 aaKnown RBP eCLIP9.77□□□□□ -0.85
LRP1-205ENST00000553446 NBPF1Q3BBV0 1214 aa9.77□□□□□ -0.85
LRP1-205ENST00000553446 SLAIN2Q9P270 581 aa9.77□□□□□ -0.85
LRP1-205ENST00000553446 LRPPRCP42704 1394 aaKnown RBP9.76□□□□□ -0.85
LRP1-205ENST00000553446 YTHDC2Q9H6S0 1430 aaKnown RBP9.76□□□□□ -0.85
LRP1-205ENST00000553446 C19orf44Q9H6X5 657 aa9.76□□□□□ -0.85
LRP1-205ENST00000553446 NUTM2FA1L443 756 aa9.75□□□□□ -0.85
LRP1-205ENST00000553446 DDX17Q92841 729 aaKnown RBP9.75□□□□□ -0.85
LRP1-205ENST00000553446 TRAK1Q9UPV9 953 aa9.75□□□□□ -0.85
LRP1-205ENST00000553446 ADGRB1O14514 1584 aa9.75□□□□□ -0.85
LRP1-205ENST00000553446 ABCC11Q96J66 1382 aa9.75□□□□□ -0.85
LRP1-205ENST00000553446 PTCH1Q13635 1447 aa9.74□□□□□ -0.85
LRP1-205ENST00000553446 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.74□□□□□ -0.85
LRP1-205ENST00000553446 ATF3P18847 181 aa9.74□□□□□ -0.85
LRP1-205ENST00000553446 NBPF8Q3BBV2 869 aa9.74□□□□□ -0.85
LRP1-205ENST00000553446 PRAM1Q96QH2 718 aa9.74□□□□□ -0.85
LRP1-205ENST00000553446 PRAG1Q86YV5 1406 aa9.73□□□□□ -0.85
LRP1-205ENST00000553446 ADGRL3Q9HAR2 1447 aa9.73□□□□□ -0.85
LRP1-205ENST00000553446 NALCNQ8IZF0 1738 aa9.73□□□□□ -0.85
LRP1-205ENST00000553446 TECPR2O15040 1411 aa9.73□□□□□ -0.85
LRP1-205ENST00000553446 MST1RQ04912 1400 aa9.73□□□□□ -0.85
LRP1-205ENST00000553446 NCOA3Q9Y6Q9 1424 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms