RNA–Protein interactions for RNA: ENST00000553446.1

LRP1-205, Transcript of LDL receptor related protein 1, humanhuman

TSL 5

Gene LRP1, Length 292 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-205ENST00000553446 NISCHQ9Y2I1 1504 aa16.34■□□□□ 0.21
LRP1-205ENST00000553446 CCDC180Q9P1Z9 1646 aa14.41□□□□□ -0.1
LRP1-205ENST00000553446 ABCC9O60706 1549 aa14.29□□□□□ -0.12
LRP1-205ENST00000553446 DCAF8L2P0C7V8 631 aa13.78□□□□□ -0.2
LRP1-205ENST00000553446 DNAJC5BQ9UF47 199 aa13.67□□□□□ -0.22
LRP1-205ENST00000553446 RB1CC1Q8TDY2 1594 aa13.61□□□□□ -0.23
LRP1-205ENST00000553446 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
LRP1-205ENST00000553446 NACADO15069 1562 aa13.58□□□□□ -0.23
LRP1-205ENST00000553446 MYO15BQ96JP2 1530 aa13.46□□□□□ -0.25
LRP1-205ENST00000553446 DCAF1Q9Y4B6 1507 aa13.43□□□□□ -0.26
LRP1-205ENST00000553446 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
LRP1-205ENST00000553446 UNC13AQ9UPW8 1703 aa13.31□□□□□ -0.28
LRP1-205ENST00000553446 SCRIBQ14160 1630 aa13.3□□□□□ -0.28
LRP1-205ENST00000553446 BICRAQ9NZM4 1560 aa13.28□□□□□ -0.28
LRP1-205ENST00000553446 SHROOM4Q9ULL8 1493 aa13.07□□□□□ -0.32
LRP1-205ENST00000553446 DNAJC5Q9H3Z4 198 aa13.03□□□□□ -0.32
LRP1-205ENST00000553446 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.35
LRP1-205ENST00000553446 CC2D2AQ9P2K1 1620 aa12.85□□□□□ -0.35
LRP1-205ENST00000553446 CECR2Q9BXF3 1484 aa12.82□□□□□ -0.36
LRP1-205ENST00000553446 SMARCA4P51532 1647 aa12.66□□□□□ -0.38
LRP1-205ENST00000553446 MROH2BQ7Z745 1585 aa12.65□□□□□ -0.38
LRP1-205ENST00000553446 BAZ1AQ9NRL2 1556 aaPredicted RBP12.62□□□□□ -0.39
LRP1-205ENST00000553446 ATAD2BQ9ULI0 1458 aa12.62□□□□□ -0.39
LRP1-205ENST00000553446 NCAPD3P42695 1498 aa12.58□□□□□ -0.4
LRP1-205ENST00000553446 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
LRP1-205ENST00000553446 BAZ1BQ9UIG0 1483 aaKnown RBP12.5□□□□□ -0.41
LRP1-205ENST00000553446 WIZO95785 1651 aa12.5□□□□□ -0.41
LRP1-205ENST00000553446 PEG3Q9GZU2 1588 aa12.49□□□□□ -0.41
LRP1-205ENST00000553446 RSF1Q96T23 1441 aaPredicted RBP12.49□□□□□ -0.41
LRP1-205ENST00000553446 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
LRP1-205ENST00000553446 NESP48681 1621 aa12.38□□□□□ -0.43
LRP1-205ENST00000553446 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
LRP1-205ENST00000553446 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
LRP1-205ENST00000553446 CUX2O14529 1486 aa12.3□□□□□ -0.44
LRP1-205ENST00000553446 SUPT5HO00267 1087 aaKnown RBP12.28□□□□□ -0.44
LRP1-205ENST00000553446 ERCC6Q03468 1493 aa12.25□□□□□ -0.45
LRP1-205ENST00000553446 CADPSQ9ULU8 1353 aa12.24□□□□□ -0.45
LRP1-205ENST00000553446 CCDC88BA6NC98 1476 aa12.23□□□□□ -0.45
LRP1-205ENST00000553446 LAMC3Q9Y6N6 1575 aa12.2□□□□□ -0.46
LRP1-205ENST00000553446 CFTRP13569 1480 aa12.15□□□□□ -0.46
LRP1-205ENST00000553446 PDS5BQ9NTI5 1447 aa12.15□□□□□ -0.46
LRP1-205ENST00000553446 KIF21AQ7Z4S6 1674 aa12.14□□□□□ -0.47
LRP1-205ENST00000553446 THOC2Q8NI27 1593 aaKnown RBP12.1□□□□□ -0.47
LRP1-205ENST00000553446 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
LRP1-205ENST00000553446 CEP164Q9UPV0 1460 aa12.06□□□□□ -0.48
LRP1-205ENST00000553446 MRC2Q9UBG0 1479 aa12.05□□□□□ -0.48
LRP1-205ENST00000553446 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
LRP1-205ENST00000553446 WDR62O43379 1518 aa11.99□□□□□ -0.49
LRP1-205ENST00000553446 PRDM2Q13029 1718 aa11.94□□□□□ -0.5
LRP1-205ENST00000553446 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
LRP1-205ENST00000553446 DNMBPQ6XZF7 1577 aa11.86□□□□□ -0.51
LRP1-205ENST00000553446 CUX1P39880 1505 aa11.85□□□□□ -0.51
LRP1-205ENST00000553446 ZNF608Q9ULD9 1512 aaPredicted RBP11.85□□□□□ -0.51
LRP1-205ENST00000553446 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
LRP1-205ENST00000553446 ABCC8Q09428 1581 aa11.82□□□□□ -0.52
LRP1-205ENST00000553446 POLA1P09884 1462 aaPredicted RBP11.82□□□□□ -0.52
LRP1-205ENST00000553446 FGD5Q6ZNL6 1462 aa11.81□□□□□ -0.52
LRP1-205ENST00000553446 IFT140Q96RY7 1462 aa11.8□□□□□ -0.52
LRP1-205ENST00000553446 SOGA1O94964 1423 aa11.77□□□□□ -0.52
LRP1-205ENST00000553446 AQRO60306 1485 aaKnown RBP eCLIP11.77□□□□□ -0.524e-6■■■■□ 24.8
LRP1-205ENST00000553446 TDRD9Q8NDG6 1382 aaKnown RBP11.77□□□□□ -0.53
LRP1-205ENST00000553446 TARBP1Q13395 1621 aaKnown RBP11.76□□□□□ -0.53
LRP1-205ENST00000553446 AEBP2Q6ZN18 517 aaPredicted RBP11.76□□□□□ -0.53
LRP1-205ENST00000553446 WRNQ14191 1432 aaPredicted RBP eCLIP11.76□□□□□ -0.53
LRP1-205ENST00000553446 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
LRP1-205ENST00000553446 EIF4G3O43432 1585 aaKnown RBP11.72□□□□□ -0.53
LRP1-205ENST00000553446 TOP2BQ02880 1626 aa11.69□□□□□ -0.54
LRP1-205ENST00000553446 RIMBP3CA6NJZ7 1639 aa11.68□□□□□ -0.54
LRP1-205ENST00000553446 RIMBP3BA6NNM3 1639 aa11.68□□□□□ -0.54
LRP1-205ENST00000553446 RIMBP3Q9UFD9 1639 aa11.68□□□□□ -0.54
LRP1-205ENST00000553446 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
LRP1-205ENST00000553446 FBLN2P98095 1184 aa11.65□□□□□ -0.54
LRP1-205ENST00000553446 ABCA10Q8WWZ4 1543 aa11.65□□□□□ -0.55
LRP1-205ENST00000553446 WDR97A6NE52 1622 aa11.64□□□□□ -0.55
LRP1-205ENST00000553446 SNAPC4Q5SXM2 1469 aa11.63□□□□□ -0.55
LRP1-205ENST00000553446 OSCARQ8IYS5 282 aa11.62□□□□□ -0.55
LRP1-205ENST00000553446 GAPVD1Q14C86 1478 aa11.62□□□□□ -0.55
LRP1-205ENST00000553446 GRIN2BQ13224 1484 aa11.6□□□□□ -0.55
LRP1-205ENST00000553446 ABCA5Q8WWZ7 1642 aa11.59□□□□□ -0.55
LRP1-205ENST00000553446 TRHP20396 242 aaPredicted RBP11.58□□□□□ -0.56
LRP1-205ENST00000553446 CHMP7Q8WUX9 453 aaPredicted RBP11.56□□□□□ -0.56
LRP1-205ENST00000553446 CHD1O14646 1710 aa11.55□□□□□ -0.56
LRP1-205ENST00000553446 PBRM1Q86U86 1689 aa11.55□□□□□ -0.56
LRP1-205ENST00000553446 MAGI1Q96QZ7 1491 aaPredicted RBP11.54□□□□□ -0.56
LRP1-205ENST00000553446 SYNJ2O15056 1496 aa11.52□□□□□ -0.56
LRP1-205ENST00000553446 RUSC2Q8N2Y8 1516 aa11.51□□□□□ -0.57
LRP1-205ENST00000553446 IGF1RP08069 1367 aa11.5□□□□□ -0.57
LRP1-205ENST00000553446 ARHGEF11O15085 1522 aa11.5□□□□□ -0.57
LRP1-205ENST00000553446 ADAMTS12P58397 1594 aa11.49□□□□□ -0.57
LRP1-205ENST00000553446 KIF27Q86VH2 1401 aa11.48□□□□□ -0.57
LRP1-205ENST00000553446 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
LRP1-205ENST00000553446 FHAD1B1AJZ9 1412 aa11.47□□□□□ -0.57
LRP1-205ENST00000553446 GRIN2AQ12879 1464 aa11.46□□□□□ -0.57
LRP1-205ENST00000553446 CLASP1Q7Z460 1538 aa11.45□□□□□ -0.58
LRP1-205ENST00000553446 CHIC1Q5VXU3 224 aa11.44□□□□□ -0.58
LRP1-205ENST00000553446 CEP170Q5SW79 1584 aa11.43□□□□□ -0.58
LRP1-205ENST00000553446 CYB5RLQ6IPT4 315 aa11.43□□□□□ -0.58
LRP1-205ENST00000553446 NUP160Q12769 1436 aa11.41□□□□□ -0.58
LRP1-205ENST00000553446 CARMIL1Q5VZK9 1371 aa11.41□□□□□ -0.58
LRP1-205ENST00000553446 FAM9AQ8IZU1 332 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms