RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 LTKP29376 864 aa14.53□□□□□ -0.08
LETMD1-234ENST00000552645 BCANQ96GW7 911 aa14.53□□□□□ -0.08
LETMD1-234ENST00000552645 SLIT1O75093 1534 aa14.53□□□□□ -0.08
LETMD1-234ENST00000552645 SCAF11Q99590 1463 aaKnown RBP14.53□□□□□ -0.08
LETMD1-234ENST00000552645 ARHGAP23Q9P227 1491 aa14.52□□□□□ -0.08
LETMD1-234ENST00000552645 NEURL4Q96JN8 1562 aa14.52□□□□□ -0.09
LETMD1-234ENST00000552645 RIMS2Q9UQ26 1411 aa14.52□□□□□ -0.09
LETMD1-234ENST00000552645 IQGAP1P46940 1657 aa14.51□□□□□ -0.09
LETMD1-234ENST00000552645 RGL3Q3MIN7 710 aa14.51□□□□□ -0.09
LETMD1-234ENST00000552645 NPHP4O75161 1426 aaPredicted RBP14.5□□□□□ -0.09
LETMD1-234ENST00000552645 ANKRD30BQ9BXX2 1392 aa14.5□□□□□ -0.09
LETMD1-234ENST00000552645 HDGFP51858 240 aaKnown RBP14.5□□□□□ -0.09
LETMD1-234ENST00000552645 ZFYVE9O95405 1425 aa14.48□□□□□ -0.09
LETMD1-234ENST00000552645 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.48□□□□□ -0.09
LETMD1-234ENST00000552645 MED14O60244 1454 aa14.47□□□□□ -0.09
LETMD1-234ENST00000552645 DHX57Q6P158 1386 aaKnown RBP14.46□□□□□ -0.09
LETMD1-234ENST00000552645 SLC26A8Q96RN1 970 aa14.45□□□□□ -0.1
LETMD1-234ENST00000552645 NEXMIFQ5QGS0 1516 aa14.45□□□□□ -0.1
LETMD1-234ENST00000552645 PPLO60437 1756 aa14.45□□□□□ -0.1
LETMD1-234ENST00000552645 SPATA31E1Q6ZUB1 1445 aa14.43□□□□□ -0.1
LETMD1-234ENST00000552645 NEUROD1Q13562 356 aa14.43□□□□□ -0.1
LETMD1-234ENST00000552645 ZNF335Q9H4Z2 1342 aaPredicted RBP14.43□□□□□ -0.1
LETMD1-234ENST00000552645 PLEKHG1Q9ULL1 1385 aa14.43□□□□□ -0.1
LETMD1-234ENST00000552645 VGFO15240 615 aaPredicted RBP14.41□□□□□ -0.1
LETMD1-234ENST00000552645 SIN3AQ96ST3 1273 aa14.41□□□□□ -0.1
LETMD1-234ENST00000552645 RPGRIP1LQ68CZ1 1315 aa14.41□□□□□ -0.1
LETMD1-234ENST00000552645 IFT172Q9UG01 1749 aa14.41□□□□□ -0.1
LETMD1-234ENST00000552645 KDM2AQ9Y2K7 1162 aa14.4□□□□□ -0.1
LETMD1-234ENST00000552645 DCAF11Q8TEB1 546 aa14.38□□□□□ -0.11
LETMD1-234ENST00000552645 ADGRF5Q8IZF2 1346 aa14.38□□□□□ -0.11
LETMD1-234ENST00000552645 NRXN3Q9Y4C0 1643 aa14.37□□□□□ -0.11
LETMD1-234ENST00000552645 STRCP1A6NGW2 1772 aa14.37□□□□□ -0.11
LETMD1-234ENST00000552645 SETBP1Q9Y6X0 1596 aa14.36□□□□□ -0.11
LETMD1-234ENST00000552645 ADAMTS13Q76LX8 1427 aa14.36□□□□□ -0.11
LETMD1-234ENST00000552645 DIP2AQ14689 1571 aa14.35□□□□□ -0.11
LETMD1-234ENST00000552645 LTBP4Q8N2S1 1624 aa14.34□□□□□ -0.11
LETMD1-234ENST00000552645 CCER1Q8TC90 406 aaPredicted RBP14.34□□□□□ -0.11
LETMD1-234ENST00000552645 TBX22Q9Y458 520 aa14.34□□□□□ -0.11
LETMD1-234ENST00000552645 CHD2O14647 1828 aaKnown RBP14.34□□□□□ -0.11
LETMD1-234ENST00000552645 ALKQ9UM73 1620 aa14.33□□□□□ -0.12
LETMD1-234ENST00000552645 CERKQ8TCT0 537 aa14.32□□□□□ -0.12
LETMD1-234ENST00000552645 MYOM2P54296 1465 aa14.32□□□□□ -0.12
LETMD1-234ENST00000552645 CPS1P31327 1500 aa14.31□□□□□ -0.12
LETMD1-234ENST00000552645 KCNA6P17658 529 aa14.31□□□□□ -0.12
LETMD1-234ENST00000552645 METP08581 1390 aa14.31□□□□□ -0.12
LETMD1-234ENST00000552645 SETD1AO15047 1707 aaKnown RBP14.31□□□□□ -0.12
LETMD1-234ENST00000552645 L3MBTL2Q969R5 705 aa14.3□□□□□ -0.12
LETMD1-234ENST00000552645 RBM33Q96EV2 1170 aaKnown RBP14.3□□□□□ -0.12
LETMD1-234ENST00000552645 PIK3C2GO75747 1445 aa14.3□□□□□ -0.12
LETMD1-234ENST00000552645 PROSER2Q86WR7 435 aaPredicted RBP14.3□□□□□ -0.12
LETMD1-234ENST00000552645 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
LETMD1-234ENST00000552645 CFAP70Q5T0N1 1121 aa14.29□□□□□ -0.12
LETMD1-234ENST00000552645 AMOTL2Q9Y2J4 779 aa14.29□□□□□ -0.12
LETMD1-234ENST00000552645 TMEM132EQ6IEE7 984 aa14.28□□□□□ -0.12
LETMD1-234ENST00000552645 STK26Q9P289 416 aa14.28□□□□□ -0.12
LETMD1-234ENST00000552645 PTPRUQ92729 1446 aa14.28□□□□□ -0.12
LETMD1-234ENST00000552645 NWD1Q149M9 1564 aa14.28□□□□□ -0.12
LETMD1-234ENST00000552645 PIK3R4Q99570 1358 aa14.27□□□□□ -0.12
LETMD1-234ENST00000552645 LAMC1P11047 1609 aa14.27□□□□□ -0.13
LETMD1-234ENST00000552645 NRXN1Q9ULB1 1477 aa14.27□□□□□ -0.13
LETMD1-234ENST00000552645 LRRC7Q96NW7 1537 aa14.27□□□□□ -0.13
LETMD1-234ENST00000552645 C14orf37Q86TY3 774 aa14.26□□□□□ -0.13
LETMD1-234ENST00000552645 XIRP1Q702N8 1843 aaKnown RBP14.26□□□□□ -0.13
LETMD1-234ENST00000552645 STAC3Q96MF2 364 aa14.26□□□□□ -0.13
LETMD1-234ENST00000552645 NKTRP30414 1462 aaKnown RBP14.26□□□□□ -0.13
LETMD1-234ENST00000552645 XRN1Q8IZH2 1706 aaKnown RBP14.25□□□□□ -0.13
LETMD1-234ENST00000552645 C14orf93Q9H972 538 aaKnown RBP14.25□□□□□ -0.13
LETMD1-234ENST00000552645 TMEM94Q12767 1356 aa14.25□□□□□ -0.13
LETMD1-234ENST00000552645 ASXL1Q8IXJ9 1541 aa14.24□□□□□ -0.13
LETMD1-234ENST00000552645 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
LETMD1-234ENST00000552645 PRAG1Q86YV5 1406 aa14.22□□□□□ -0.13
LETMD1-234ENST00000552645 UBAP1LF5GYI3 381 aa14.21□□□□□ -0.13
LETMD1-234ENST00000552645 YTHDC2Q9H6S0 1430 aaKnown RBP14.21□□□□□ -0.13
LETMD1-234ENST00000552645 IQSEC2Q5JU85 1478 aa14.2□□□□□ -0.14
LETMD1-234ENST00000552645 KIAA1210Q9ULL0 1709 aa14.2□□□□□ -0.14
LETMD1-234ENST00000552645 LRPPRCP42704 1394 aaKnown RBP14.19□□□□□ -0.14
LETMD1-234ENST00000552645 ROBO2Q9HCK4 1378 aa14.19□□□□□ -0.14
LETMD1-234ENST00000552645 MSH6P52701 1360 aa14.19□□□□□ -0.14
LETMD1-234ENST00000552645 NBPF1Q3BBV0 1214 aa14.19□□□□□ -0.14
LETMD1-234ENST00000552645 TRAK1Q9UPV9 953 aa14.19□□□□□ -0.14
LETMD1-234ENST00000552645 KNDC1Q76NI1 1749 aa14.19□□□□□ -0.14
LETMD1-234ENST00000552645 PIP4K2BP78356 416 aa14.18□□□□□ -0.14
LETMD1-234ENST00000552645 SAFB2Q14151 953 aaKnown RBP eCLIP14.18□□□□□ -0.14
LETMD1-234ENST00000552645 WAPLQ7Z5K2 1190 aa14.18□□□□□ -0.14
LETMD1-234ENST00000552645 ADGRB1O14514 1584 aa14.18□□□□□ -0.14
LETMD1-234ENST00000552645 TRPM1Q7Z4N2 1603 aa14.17□□□□□ -0.14
LETMD1-234ENST00000552645 TOM1O60784 492 aa14.17□□□□□ -0.14
LETMD1-234ENST00000552645 NALCNQ8IZF0 1738 aa14.17□□□□□ -0.14
LETMD1-234ENST00000552645 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.17□□□□□ -0.14
LETMD1-234ENST00000552645 PTCH1Q13635 1447 aa14.17□□□□□ -0.14
LETMD1-234ENST00000552645 NBPF8Q3BBV2 869 aa14.16□□□□□ -0.14
LETMD1-234ENST00000552645 POGKQ9P215 609 aa14.16□□□□□ -0.14
LETMD1-234ENST00000552645 ABCC11Q96J66 1382 aa14.16□□□□□ -0.14
LETMD1-234ENST00000552645 FBXO41Q8TF61 875 aa14.15□□□□□ -0.14
LETMD1-234ENST00000552645 ROCK2O75116 1388 aaKnown RBP14.15□□□□□ -0.14
LETMD1-234ENST00000552645 ATF3P18847 181 aa14.15□□□□□ -0.14
LETMD1-234ENST00000552645 PRAM1Q96QH2 718 aa14.15□□□□□ -0.14
LETMD1-234ENST00000552645 PLEKHH1Q9ULM0 1364 aa14.14□□□□□ -0.15
LETMD1-234ENST00000552645 TECPR2O15040 1411 aa14.14□□□□□ -0.15
LETMD1-234ENST00000552645 C19orf44Q9H6X5 657 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms