RNA–Protein interactions for RNA: ENST00000551477.5

LETMD1-230, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 1,186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-230ENST00000551477 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.23■■□□□ 1.63
LETMD1-230ENST00000551477 MPHOSPH9Q99550 1183 aa25.23■■□□□ 1.63
LETMD1-230ENST00000551477 KIF1BO60333 1816 aa25.22■■□□□ 1.63
LETMD1-230ENST00000551477 IQSEC2Q5JU85 1478 aa25.21■■□□□ 1.63
LETMD1-230ENST00000551477 ZFYVE9O95405 1425 aa25.21■■□□□ 1.63
LETMD1-230ENST00000551477 CLTCL1P53675 1640 aa25.21■■□□□ 1.63
LETMD1-230ENST00000551477 CPS1P31327 1500 aa25.21■■□□□ 1.63
LETMD1-230ENST00000551477 BCANQ96GW7 911 aa25.2■■□□□ 1.62
LETMD1-230ENST00000551477 ZNF326Q5BKZ1 582 aaKnown RBP25.17■■□□□ 1.62
LETMD1-230ENST00000551477 HRCP23327 699 aa25.16■■□□□ 1.62
LETMD1-230ENST00000551477 PLEKHG1Q9ULL1 1385 aa25.16■■□□□ 1.62
LETMD1-230ENST00000551477 FOXD1Q16676 465 aa25.15■■□□□ 1.62
LETMD1-230ENST00000551477 SLC26A8Q96RN1 970 aa25.12■■□□□ 1.61
LETMD1-230ENST00000551477 NUTM2DQ5VT03 806 aaPredicted RBP25.11■■□□□ 1.61
LETMD1-230ENST00000551477 STRCP1A6NGW2 1772 aa25.1■■□□□ 1.61
LETMD1-230ENST00000551477 CCDC144AA2RUR9 1427 aa25.1■■□□□ 1.61
LETMD1-230ENST00000551477 SENP3Q9H4L4 574 aaPredicted RBP25.07■■□□□ 1.6
LETMD1-230ENST00000551477 TBX22Q9Y458 520 aa25.05■■□□□ 1.6
LETMD1-230ENST00000551477 DIP2AQ14689 1571 aa25.05■■□□□ 1.6
LETMD1-230ENST00000551477 NEXMIFQ5QGS0 1516 aa25.04■■□□□ 1.6
LETMD1-230ENST00000551477 KCNA6P17658 529 aa25.04■■□□□ 1.6
LETMD1-230ENST00000551477 RPGRIP1LQ68CZ1 1315 aa25.04■■□□□ 1.6
LETMD1-230ENST00000551477 LRRC7Q96NW7 1537 aa25.02■■□□□ 1.6
LETMD1-230ENST00000551477 CHD2O14647 1828 aaKnown RBP25.01■■□□□ 1.59
LETMD1-230ENST00000551477 UBAP1LF5GYI3 381 aa25.01■■□□□ 1.59
LETMD1-230ENST00000551477 VGFO15240 615 aaPredicted RBP25.01■■□□□ 1.59
LETMD1-230ENST00000551477 ADAMTS13Q76LX8 1427 aa25■■□□□ 1.59
LETMD1-230ENST00000551477 SETBP1Q9Y6X0 1596 aa24.99■■□□□ 1.59
LETMD1-230ENST00000551477 PPLO60437 1756 aa24.98■■□□□ 1.59
LETMD1-230ENST00000551477 NWD1Q149M9 1564 aa24.98■■□□□ 1.59
LETMD1-230ENST00000551477 PIK3R4Q99570 1358 aa24.98■■□□□ 1.59
LETMD1-230ENST00000551477 NKTRP30414 1462 aaKnown RBP24.97■■□□□ 1.59
LETMD1-230ENST00000551477 TOM1O60784 492 aa24.97■■□□□ 1.59
LETMD1-230ENST00000551477 NRXN3Q9Y4C0 1643 aa24.95■■□□□ 1.58
LETMD1-230ENST00000551477 RGL3Q3MIN7 710 aa24.95■■□□□ 1.58
LETMD1-230ENST00000551477 PROSER2Q86WR7 435 aaPredicted RBP24.95■■□□□ 1.58
LETMD1-230ENST00000551477 SPATA31E1Q6ZUB1 1445 aa24.95■■□□□ 1.58
LETMD1-230ENST00000551477 XIRP1Q702N8 1843 aaKnown RBP24.93■■□□□ 1.58
LETMD1-230ENST00000551477 ANKRD30BQ9BXX2 1392 aa24.92■■□□□ 1.58
LETMD1-230ENST00000551477 TMEM94Q12767 1356 aa24.91■■□□□ 1.58
LETMD1-230ENST00000551477 TRIM26Q12899 539 aaPredicted RBP24.9■■□□□ 1.58
LETMD1-230ENST00000551477 IFT172Q9UG01 1749 aa24.89■■□□□ 1.58
LETMD1-230ENST00000551477 AMOTL2Q9Y2J4 779 aa24.87■■□□□ 1.57
LETMD1-230ENST00000551477 SCAF1Q9H7N4 1312 aaKnown RBP24.86■■□□□ 1.57
LETMD1-230ENST00000551477 PIP4K2BP78356 416 aa24.85■■□□□ 1.57
LETMD1-230ENST00000551477 METP08581 1390 aa24.84■■□□□ 1.57
LETMD1-230ENST00000551477 ALKQ9UM73 1620 aa24.83■■□□□ 1.57
LETMD1-230ENST00000551477 RBM33Q96EV2 1170 aaKnown RBP24.83■■□□□ 1.57
LETMD1-230ENST00000551477 PTPRUQ92729 1446 aa24.83■■□□□ 1.57
LETMD1-230ENST00000551477 NCOA3Q9Y6Q9 1424 aa24.83■■□□□ 1.57
LETMD1-230ENST00000551477 XRN1Q8IZH2 1706 aaKnown RBP24.82■■□□□ 1.56
LETMD1-230ENST00000551477 ADGRF5Q8IZF2 1346 aa24.82■■□□□ 1.56
LETMD1-230ENST00000551477 MSH6P52701 1360 aa24.81■■□□□ 1.56
LETMD1-230ENST00000551477 SETD1AO15047 1707 aaKnown RBP24.81■■□□□ 1.56
LETMD1-230ENST00000551477 C14orf37Q86TY3 774 aa24.81■■□□□ 1.56
LETMD1-230ENST00000551477 MYOM2P54296 1465 aa24.77■■□□□ 1.56
LETMD1-230ENST00000551477 PIK3C2GO75747 1445 aa24.76■■□□□ 1.55
LETMD1-230ENST00000551477 STAC3Q96MF2 364 aa24.74■■□□□ 1.55
LETMD1-230ENST00000551477 C19orf44Q9H6X5 657 aa24.74■■□□□ 1.55
LETMD1-230ENST00000551477 NRXN1Q9ULB1 1477 aa24.71■■□□□ 1.55
LETMD1-230ENST00000551477 DCAF11Q8TEB1 546 aa24.71■■□□□ 1.55
LETMD1-230ENST00000551477 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.71■■□□□ 1.55
LETMD1-230ENST00000551477 LAMC1P11047 1609 aa24.71■■□□□ 1.55
LETMD1-230ENST00000551477 ATF3P18847 181 aa24.7■■□□□ 1.54
LETMD1-230ENST00000551477 PTCH1Q13635 1447 aa24.69■■□□□ 1.54
LETMD1-230ENST00000551477 CADPS2Q86UW7 1296 aa24.69■■□□□ 1.54
LETMD1-230ENST00000551477 C14orf93Q9H972 538 aaKnown RBP24.68■■□□□ 1.54
LETMD1-230ENST00000551477 SLAIN2Q9P270 581 aa24.68■■□□□ 1.54
LETMD1-230ENST00000551477 PRAG1Q86YV5 1406 aa24.68■■□□□ 1.54
LETMD1-230ENST00000551477 HSPA1LP34931 641 aa24.67■■□□□ 1.54
LETMD1-230ENST00000551477 KDM2AQ9Y2K7 1162 aa24.67■■□□□ 1.54
LETMD1-230ENST00000551477 FAM135BQ49AJ0 1406 aa24.67■■□□□ 1.54
LETMD1-230ENST00000551477 DCCP43146 1447 aa24.66■■□□□ 1.54
LETMD1-230ENST00000551477 TMEM132EQ6IEE7 984 aa24.64■■□□□ 1.54
LETMD1-230ENST00000551477 LRPPRCP42704 1394 aaKnown RBP24.64■■□□□ 1.53
LETMD1-230ENST00000551477 ROBO2Q9HCK4 1378 aa24.64■■□□□ 1.53
LETMD1-230ENST00000551477 ROBO1Q9Y6N7 1651 aa24.63■■□□□ 1.53
LETMD1-230ENST00000551477 ADGRL3Q9HAR2 1447 aa24.63■■□□□ 1.53
LETMD1-230ENST00000551477 CFAP70Q5T0N1 1121 aa24.63■■□□□ 1.53
LETMD1-230ENST00000551477 STK26Q9P289 416 aa24.63■■□□□ 1.53
LETMD1-230ENST00000551477 KNDC1Q76NI1 1749 aa24.62■■□□□ 1.53
LETMD1-230ENST00000551477 DHX57Q6P158 1386 aaKnown RBP24.62■■□□□ 1.53
LETMD1-230ENST00000551477 ABCC11Q96J66 1382 aa24.62■■□□□ 1.53
LETMD1-230ENST00000551477 NALCNQ8IZF0 1738 aa24.61■■□□□ 1.53
LETMD1-230ENST00000551477 ASXL1Q8IXJ9 1541 aa24.61■■□□□ 1.53
LETMD1-230ENST00000551477 TECPR2O15040 1411 aa24.61■■□□□ 1.53
LETMD1-230ENST00000551477 YTHDC2Q9H6S0 1430 aaKnown RBP24.61■■□□□ 1.53
LETMD1-230ENST00000551477 SIRT1Q96EB6 747 aa24.55■■□□□ 1.52
LETMD1-230ENST00000551477 SIN3AQ96ST3 1273 aa24.55■■□□□ 1.52
LETMD1-230ENST00000551477 NEUROD1Q13562 356 aa24.54■■□□□ 1.52
LETMD1-230ENST00000551477 WAPLQ7Z5K2 1190 aa24.52■■□□□ 1.52
LETMD1-230ENST00000551477 MST1RQ04912 1400 aa24.52■■□□□ 1.52
LETMD1-230ENST00000551477 PHLPP1O60346 1717 aa24.51■■□□□ 1.51
LETMD1-230ENST00000551477 ADGRB1O14514 1584 aa24.5■■□□□ 1.51
LETMD1-230ENST00000551477 KIAA1210Q9ULL0 1709 aa24.5■■□□□ 1.51
LETMD1-230ENST00000551477 DLC1Q96QB1 1528 aa24.49■■□□□ 1.51
LETMD1-230ENST00000551477 CDC42BPGQ6DT37 1551 aa24.48■■□□□ 1.51
LETMD1-230ENST00000551477 L3MBTL2Q969R5 705 aa24.48■■□□□ 1.51
LETMD1-230ENST00000551477 BRINP3Q76B58 766 aa24.47■■□□□ 1.51
LETMD1-230ENST00000551477 PCGF6Q9BYE7 350 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms