RNA–Protein interactions for RNA: ENST00000551477.5

LETMD1-230, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 1,186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-230ENST00000551477 NISCHQ9Y2I1 1504 aa41.24■■■■■ 4.19
LETMD1-230ENST00000551477 CCDC180Q9P1Z9 1646 aa36.76■■■■□ 3.48
LETMD1-230ENST00000551477 ABCC9O60706 1549 aa35.96■■■■□ 3.35
LETMD1-230ENST00000551477 RB1CC1Q8TDY2 1594 aa34.63■■■■□ 3.13
LETMD1-230ENST00000551477 NACADO15069 1562 aa34.57■■■■□ 3.12
LETMD1-230ENST00000551477 DCAF8L2P0C7V8 631 aa34.54■■■■□ 3.12
LETMD1-230ENST00000551477 ZCCHC6Q5VYS8 1495 aaKnown RBP34.33■■■■□ 3.09
LETMD1-230ENST00000551477 MYO15BQ96JP2 1530 aa34.32■■■■□ 3.08
LETMD1-230ENST00000551477 DCAF1Q9Y4B6 1507 aa34.14■■■■□ 3.06
LETMD1-230ENST00000551477 UNC13AQ9UPW8 1703 aa33.83■■■■□ 3.01
LETMD1-230ENST00000551477 PABPN1Q86U42 306 aaKnown RBP eCLIP33.58■■■□□ 2.97
LETMD1-230ENST00000551477 BICRAQ9NZM4 1560 aa33.5■■■□□ 2.95
LETMD1-230ENST00000551477 SCRIBQ14160 1630 aa33.49■■■□□ 2.95
LETMD1-230ENST00000551477 SHROOM4Q9ULL8 1493 aa33.22■■■□□ 2.91
LETMD1-230ENST00000551477 DNAJC5BQ9UF47 199 aa33.01■■■□□ 2.87
LETMD1-230ENST00000551477 EIF4G1Q04637 1599 aaKnown RBP32.66■■■□□ 2.82
LETMD1-230ENST00000551477 CC2D2AQ9P2K1 1620 aa32.55■■■□□ 2.8
LETMD1-230ENST00000551477 CECR2Q9BXF3 1484 aa32.34■■■□□ 2.77
LETMD1-230ENST00000551477 SMARCA4P51532 1647 aa32.04■■■□□ 2.72
LETMD1-230ENST00000551477 BAZ1AQ9NRL2 1556 aaPredicted RBP32.01■■■□□ 2.71
LETMD1-230ENST00000551477 SMARCA2P51531 1590 aa31.87■■■□□ 2.69
LETMD1-230ENST00000551477 NCAPD3P42695 1498 aa31.86■■■□□ 2.69
LETMD1-230ENST00000551477 ATAD2BQ9ULI0 1458 aa31.85■■■□□ 2.69
LETMD1-230ENST00000551477 MROH2BQ7Z745 1585 aa31.76■■■□□ 2.67
LETMD1-230ENST00000551477 PEG3Q9GZU2 1588 aa31.72■■■□□ 2.67
LETMD1-230ENST00000551477 HMGXB3Q12766 1538 aa31.71■■■□□ 2.67
LETMD1-230ENST00000551477 BAZ1BQ9UIG0 1483 aaKnown RBP31.62■■■□□ 2.65
LETMD1-230ENST00000551477 WIZO95785 1651 aa31.44■■■□□ 2.62
LETMD1-230ENST00000551477 RSF1Q96T23 1441 aaPredicted RBP31.38■■■□□ 2.61
LETMD1-230ENST00000551477 TOP2AP11388 1531 aaKnown RBP31.11■■■□□ 2.57
LETMD1-230ENST00000551477 NESP48681 1621 aa31.08■■■□□ 2.57
LETMD1-230ENST00000551477 LAMC3Q9Y6N6 1575 aa31.07■■■□□ 2.56
LETMD1-230ENST00000551477 ERCC6Q03468 1493 aa31.06■■■□□ 2.56
LETMD1-230ENST00000551477 CADPSQ9ULU8 1353 aa30.93■■■□□ 2.54
LETMD1-230ENST00000551477 PDS5BQ9NTI5 1447 aa30.87■■■□□ 2.53
LETMD1-230ENST00000551477 KIF21AQ7Z4S6 1674 aa30.77■■■□□ 2.52
LETMD1-230ENST00000551477 CUX2O14529 1486 aa30.75■■■□□ 2.51
LETMD1-230ENST00000551477 CCDC88BA6NC98 1476 aa30.74■■■□□ 2.51
LETMD1-230ENST00000551477 CFTRP13569 1480 aa30.73■■■□□ 2.51
LETMD1-230ENST00000551477 THOC2Q8NI27 1593 aaKnown RBP30.65■■■□□ 2.5
LETMD1-230ENST00000551477 FANCD2Q9BXW9 1451 aa30.58■■■□□ 2.49
LETMD1-230ENST00000551477 PRDM2Q13029 1718 aa30.58■■■□□ 2.49
LETMD1-230ENST00000551477 SUPT5HO00267 1087 aaKnown RBP30.57■■■□□ 2.48
LETMD1-230ENST00000551477 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.48
LETMD1-230ENST00000551477 MRC2Q9UBG0 1479 aa30.52■■■□□ 2.48
LETMD1-230ENST00000551477 WDR62O43379 1518 aa30.42■■■□□ 2.46
LETMD1-230ENST00000551477 URB2Q14146 1524 aaKnown RBP30.24■■■□□ 2.43
LETMD1-230ENST00000551477 ABCC8Q09428 1581 aa30.14■■■□□ 2.42
LETMD1-230ENST00000551477 TOPBP1Q92547 1522 aa30.07■■■□□ 2.4
LETMD1-230ENST00000551477 DNMBPQ6XZF7 1577 aa30.06■■■□□ 2.4
LETMD1-230ENST00000551477 IFT140Q96RY7 1462 aa29.93■■■□□ 2.38
LETMD1-230ENST00000551477 DNAJC5Q9H3Z4 198 aa29.85■■■□□ 2.37
LETMD1-230ENST00000551477 CUX1P39880 1505 aa29.81■■■□□ 2.36
LETMD1-230ENST00000551477 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
LETMD1-230ENST00000551477 TARBP1Q13395 1621 aaKnown RBP29.75■■■□□ 2.35
LETMD1-230ENST00000551477 ZNF608Q9ULD9 1512 aaPredicted RBP29.74■■■□□ 2.35
LETMD1-230ENST00000551477 FGD5Q6ZNL6 1462 aa29.74■■■□□ 2.35
LETMD1-230ENST00000551477 SOGA1O94964 1423 aa29.71■■■□□ 2.35
LETMD1-230ENST00000551477 RAD54L2Q9Y4B4 1467 aa29.67■■■□□ 2.34
LETMD1-230ENST00000551477 EIF4G3O43432 1585 aaKnown RBP29.66■■■□□ 2.34
LETMD1-230ENST00000551477 WRNQ14191 1432 aaPredicted RBP eCLIP29.62■■■□□ 2.33
LETMD1-230ENST00000551477 AQRO60306 1485 aaKnown RBP eCLIP29.59■■■□□ 2.331e-6■■□□□ 12.7
LETMD1-230ENST00000551477 WDR97A6NE52 1622 aa29.58■■■□□ 2.33
LETMD1-230ENST00000551477 TOP2BQ02880 1626 aa29.57■■■□□ 2.32
LETMD1-230ENST00000551477 BIVM-ERCC5R4GMW8 1640 aa29.57■■■□□ 2.32
LETMD1-230ENST00000551477 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
LETMD1-230ENST00000551477 SYNJ1O43426 1573 aa29.52■■■□□ 2.32
LETMD1-230ENST00000551477 OSCARQ8IYS5 282 aa29.48■■■□□ 2.31
LETMD1-230ENST00000551477 ABCA10Q8WWZ4 1543 aa29.45■■■□□ 2.31
LETMD1-230ENST00000551477 GRIN2BQ13224 1484 aa29.38■■■□□ 2.29
LETMD1-230ENST00000551477 GAPVD1Q14C86 1478 aa29.37■■■□□ 2.29
LETMD1-230ENST00000551477 ABCA5Q8WWZ7 1642 aa29.34■■■□□ 2.29
LETMD1-230ENST00000551477 PBRM1Q86U86 1689 aa29.34■■■□□ 2.29
LETMD1-230ENST00000551477 CHD1O14646 1710 aa29.33■■■□□ 2.29
LETMD1-230ENST00000551477 SNAPC4Q5SXM2 1469 aa29.32■■■□□ 2.28
LETMD1-230ENST00000551477 MAGI1Q96QZ7 1491 aaPredicted RBP29.32■■■□□ 2.28
LETMD1-230ENST00000551477 FBLN2P98095 1184 aa29.3■■■□□ 2.28
LETMD1-230ENST00000551477 CHMP7Q8WUX9 453 aaPredicted RBP29.22■■■□□ 2.27
LETMD1-230ENST00000551477 SYNJ2O15056 1496 aa29.19■■■□□ 2.26
LETMD1-230ENST00000551477 ERICH3Q5RHP9 1530 aa29.12■■■□□ 2.25
LETMD1-230ENST00000551477 ADAMTS12P58397 1594 aa29.06■■■□□ 2.24
LETMD1-230ENST00000551477 KIF27Q86VH2 1401 aa29.03■■■□□ 2.24
LETMD1-230ENST00000551477 FHAD1B1AJZ9 1412 aa29.03■■■□□ 2.24
LETMD1-230ENST00000551477 GRIN2AQ12879 1464 aa28.98■■■□□ 2.23
LETMD1-230ENST00000551477 RIMBP3CA6NJZ7 1639 aa28.98■■■□□ 2.23
LETMD1-230ENST00000551477 RIMBP3BA6NNM3 1639 aa28.98■■■□□ 2.23
LETMD1-230ENST00000551477 RIMBP3Q9UFD9 1639 aa28.98■■■□□ 2.23
LETMD1-230ENST00000551477 CLASP1Q7Z460 1538 aa28.97■■■□□ 2.23
LETMD1-230ENST00000551477 ARHGEF11O15085 1522 aa28.95■■■□□ 2.23
LETMD1-230ENST00000551477 TRIM41Q8WV44 630 aa28.92■■■□□ 2.22
LETMD1-230ENST00000551477 IGF1RP08069 1367 aa28.88■■■□□ 2.21
LETMD1-230ENST00000551477 CUL7Q14999 1698 aa28.87■■■□□ 2.21
LETMD1-230ENST00000551477 NUP160Q12769 1436 aa28.84■■■□□ 2.21
LETMD1-230ENST00000551477 CEP170Q5SW79 1584 aa28.83■■■□□ 2.21
LETMD1-230ENST00000551477 CARMIL1Q5VZK9 1371 aa28.73■■■□□ 2.19
LETMD1-230ENST00000551477 CYB5RLQ6IPT4 315 aa28.71■■■□□ 2.19
LETMD1-230ENST00000551477 ARAP1Q96P48 1450 aa28.69■■■□□ 2.18
LETMD1-230ENST00000551477 RUSC2Q8N2Y8 1516 aa28.67■■■□□ 2.18
LETMD1-230ENST00000551477 SHROOM2Q13796 1616 aa28.65■■■□□ 2.18
LETMD1-230ENST00000551477 JPH4Q96JJ6 628 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms